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  1. EST 'BW526566' > 
  2. Clone 'cien50480' > 
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S151.g12145.03.t

Possible name(s)

RNF123; RSPRY1; RYR2

Gene model

Harore.CG.MTP2014.S151.g12145

Location

S151 [73,136 / 92,598]

Sequences

Amino acid sequence

Length: 1,152

>Harore.CG.MTP2014.S151.g12145.03.p
MAKSTSLVSSFKIQDQRMNPTDNLSAVLKTIFPTTELSGHTNVGKSNEVLKFTNLQQHLK
SVLVNLKETKPEYISVFENKASSSSGASSSKSPRPNYLKGIFGEKKLDPREFEKDKLQDF
EIEHRIGRLGPALVSLQSHPLDTAPADPLTVVGNMNFQSVKATCCVYKGKWMYEAVLGSS
GLMQIGWCTTTCKFTREEGVGDTANSYAFDGYREAKWNSRENAKYGETWTANDIVTCLLD
LDNRTVSFCLNGKNMGIAFSNIPTGPGIAYFPAFSVAYKEVLQVNFGNHAVKHQYPGYRA
IQNPPDALSNAMYLVNSLETLFKLKQENSALTECLDPVTECLIASHIFCWLSPALSESFV
MEAALLPFLYELSSSGVHQVLNYIWSFLEEIKAQECIDFILSTVCRQYKTCPIEPSFDKQ
RKYLTFVLDLIKHSKTKTHLLEHTLYPFYCFNHFDHNFKTSKAVFLTADKRDELPYLFHI
KQPSHACVLLDDFTHEDLKERLTAVEDIQRDILRALLENDGKYSEKCCKLFAEKIRNLFQ
NYVSTTREQSALCPPLVMHSFMQRITDVIRQMWDTLTVIRGNYIPSDEGYMPPELFYTGI
VNYYDTQRAGGLTSHLLQEHKDLLDKEGVSVTMGSRSGNSDSWREDHRAFMQLIDNDPGT
SLSTLVTGDEDTEMETYNPVIRLARALLQHSTKVSSTSASLSVSRKRLCGDEDLWLPTCI
HLLALTDSCIMLYTQSIHQQMDKICSTRTKLNEFTSSLEDTEKKLNKCTDKQFDEIKASI
EQSKSLLEKHVSEMQRSMEWLKAASYAPESQHNLWWLLQVCLRTIERMSKKGALFAFIPE
FYITCATRIFKCLREYFSPTQPIDILPNLHSVLIRFALFLSHHHSDGRIINTDVKTLLAT
TLASFVTHPLQLKAIESLSKEEQKSLLRSMLTAYDEDKPWTSMGHRILAGMWRGKGFAQS
YDHLPYLAKVKRLLNRDKDPYVSALLLDELCVIMVEDSKLASDFVHSIINHLNWCFSEFI
GQLQEVHLQGSKASSAGGLLSALDAQSLRQVRIVDMLFEISVSLLRVLELTISLAPAVYL
DWDKHDKAEILLTSLVQIVNQILNRVTKKHNIFDRVLSSKHPGLRSVVHYPLLVAITGVI
VALLREHRISSW

Nucleotide sequence

Length: 3,459

>Harore.CG.MTP2014.S151.g12145.03.t
ATGGCTAAATCCACTTCTTTGGTCAGTTCATTCAAGATTCAGGATCAAAGAATGAATCCA
ACAGATAATCTGAGTGCTGTGCTGAAAACTATTTTTCCAACAACTGAATTATCTGGACAT
ACTAATGTTGGAAAAAGTAATGAAGTTTTGAAGTTCACAAATTTGCAGCAGCATTTAAAG
AGTGTTTTGGTCAACCTGAAGGAAACCAAACCAGAATACATATCAGTGTTCGAAAACAAA
GCATCATCAAGTTCAGGCGCAAGCAGTAGCAAATCCCCTAGACCGAATTATCTGAAGGGC
ATATTCGGTGAAAAGAAACTTGACCCCAGAGAATTTGAGAAGGACAAACTCCAGGATTTC
GAAATTGAACACAGGATTGGGCGGCTTGGACCCGCTCTAGTGTCTCTTCAGTCGCATCCC
TTAGATACGGCTCCTGCAGATCCGCTGACTGTCGTCGGAAACATGAACTTTCAGTCTGTC
AAAGCGACTTGCTGTGTTTACAAAGGGAAATGGATGTACGAGGCTGTCCTAGGTTCATCA
GGTCTCATGCAGATAGGCTGGTGTACAACAACATGTAAGTTTACGAGAGAAGAAGGCGTT
GGTGATACCGCGAACTCGTACGCCTTTGATGGATACAGAGAAGCCAAATGGAATAGCAGA
GAAAATGCTAAATATGGAGAGACGTGGACTGCAAATGATATTGTTACATGTCTACTTGAC
CTTGACAACAGAACCGTTTCCTTTTGCTTAAATGGAAAAAACATGGGCATCGCATTCAGT
AATATTCCAACCGGACCTGGTATTGCATATTTTCCTGCGTTCAGTGTTGCGTATAAAGAA
GTTCTACAAGTTAACTTTGGGAATCATGCCGTGAAACATCAATATCCAGGATACCGTGCT
ATTCAAAATCCCCCGGATGCGTTATCAAATGCCATGTATCTTGTCAATAGTCTCGAGACC
TTATTCAAGCTTAAACAAGAGAATAGCGCTCTAACAGAGTGTCTCGATCCTGTCACGGAA
TGTCTAATTGCAAGTCACATATTTTGTTGGCTTTCACCAGCGTTGTCTGAAAGCTTTGTG
ATGGAAGCTGCATTATTACCTTTTTTGTATGAGCTGTCCAGCTCTGGTGTGCATCAAGTG
CTAAATTATATTTGGTCATTTTTGGAGGAGATAAAGGCACAAGAATGTATTGACTTCATT
TTATCGACGGTATGCCGCCAATATAAAACGTGTCCGATCGAGCCCTCTTTTGACAAGCAA
AGAAAATATCTTACCTTTGTGCTTGATCTTATCAAACACAGCAAGACGAAAACTCATTTG
CTTGAGCATACATTATATCCTTTTTATTGCTTTAATCATTTTGATCATAATTTCAAGACT
TCTAAAGCAGTGTTTCTCACTGCAGACAAAAGAGACGAACTTCCCTATCTGTTTCACATA
AAGCAACCAAGCCATGCATGCGTGTTATTAGATGATTTTACGCATGAGGATCTCAAGGAA
AGATTGACAGCGGTTGAAGATATCCAGCGTGACATTCTGAGAGCACTATTGGAAAATGAC
GGAAAATACAGTGAAAAGTGTTGTAAACTGTTCGCGGAGAAGATTAGGAACCTTTTTCAG
AATTATGTTTCAACAACAAGAGAGCAAAGTGCACTGTGTCCTCCTTTAGTTATGCATTCA
TTCATGCAGAGAATAACAGACGTTATTCGTCAAATGTGGGATACTTTAACAGTGATCAGG
GGAAATTATATTCCATCTGATGAGGGATACATGCCTCCTGAACTCTTCTATACTGGCATA
GTCAATTACTATGATACACAGCGTGCTGGTGGACTGACATCCCACTTGCTGCAGGAACAT
AAAGATTTATTAGATAAAGAAGGTGTTAGCGTCACAATGGGAAGCAGAAGTGGAAATTCT
GATTCCTGGAGAGAAGATCACAGAGCTTTTATGCAGCTTATTGACAATGATCCAGGAACT
TCCTTAAGCACTTTGGTCACTGGTGATGAAGATACGGAAATGGAAACCTATAATCCTGTG
ATCAGATTGGCAAGAGCCCTTCTTCAGCATAGTACAAAGGTCAGTTCGACTTCTGCATCT
CTGTCCGTTTCCAGAAAAAGGTTGTGCGGCGATGAGGATCTCTGGCTTCCTACTTGCATA
CACCTCCTAGCACTCACGGATTCCTGTATCATGTTGTATACACAGTCTATTCATCAGCAA
ATGGATAAGATTTGCAGCACGAGAACTAAGCTAAATGAATTTACAAGCAGTCTCGAAGAC
ACCGAGAAGAAACTCAATAAATGCACAGATAAGCAGTTTGACGAAATAAAAGCCAGCATA
GAGCAATCGAAGTCTCTTTTGGAAAAACATGTGTCAGAAATGCAGAGATCAATGGAATGG
CTTAAAGCGGCTTCATATGCGCCGGAATCTCAACACAACTTATGGTGGCTGCTCCAAGTT
TGCCTTAGGACAATTGAAAGAATGTCGAAGAAAGGAGCTTTGTTTGCTTTTATTCCTGAA
TTTTATATTACATGTGCTACTAGAATTTTCAAGTGTTTGCGCGAGTATTTCTCTCCAACT
CAACCTATCGATATTCTTCCGAACCTGCACAGTGTACTCATTAGATTTGCTTTGTTCCTC
AGCCACCATCACTCGGATGGCAGAATTATTAACACAGATGTGAAAACACTGCTCGCTACA
ACTCTCGCATCTTTTGTAACCCATCCATTACAATTGAAGGCTATTGAATCATTGTCGAAA
GAAGAGCAAAAATCTCTCCTGCGTAGTATGCTGACTGCATACGATGAAGACAAACCTTGG
ACTAGCATGGGTCATCGTATACTCGCAGGAATGTGGAGGGGTAAAGGATTCGCGCAGAGC
TATGATCACCTGCCATACTTGGCCAAAGTGAAGAGATTACTGAACAGAGATAAAGATCCC
TATGTTTCTGCTTTATTGTTGGATGAACTCTGTGTAATTATGGTTGAAGACAGCAAACTA
GCTTCAGACTTTGTCCATAGCATCATCAATCACCTAAACTGGTGTTTCTCGGAATTTATT
GGACAATTACAAGAGGTACATCTACAAGGTTCAAAAGCTAGTAGTGCAGGTGGCTTATTG
TCTGCTCTTGATGCTCAGTCTTTGAGACAAGTTCGAATAGTCGATATGCTTTTTGAAATA
TCCGTTTCGTTGCTTCGTGTATTGGAGCTTACTATTTCGCTTGCTCCTGCGGTATATCTC
GACTGGGACAAACATGACAAAGCCGAGATTCTTCTAACAAGCCTTGTACAAATTGTCAAC
CAGATTCTTAACAGGGTTACAAAGAAGCATAACATATTTGATCGCGTTCTATCCAGCAAG
CACCCAGGTTTACGGAGTGTAGTTCATTATCCACTGCTTGTTGCAATAACAGGAGTGATT
GTCGCCCTTTTACGAGAACACAGAATATCATCTTGGTGA

InterProScan

ProSiteProfiles
B30.2/SPRY (IPR001870) - T[96-291] 16.57
SUPERFAMILY
ConA-like_dom_sf (IPR013320) - T[156-302] 5.14E-30
SMART
SPRY_dom (IPR003877) - T[168-290] 1.3E-30
Pfam
SPRY_dom (IPR003877) - T[170-288] 2.3E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN123_HUMAN 34.926 % 640 0
RSPRY_HUMAN 37.415 % 87.8 1.08E-17