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  1. Clone 'cien196388' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S152.g06011.01.t

Possible name(s)

LDLRAP1; SRCIN1

Gene model

Harore.CG.MTP2014.S152.g06011

Location

S152 [194,245 / 202,859]

Sequences

Amino acid sequence

Length: 984

>Harore.CG.MTP2014.S152.g06011.01.p
MSAPSSPSLLARLRGTSSTIKKKFRKAQSLNLPLDAASPPSTPSLDNSRFELYVEEVGNR
QPHAFTCRYLGEMSIYTLNPEHCYGFAESLAKNCSDPDMHNKCNIMIREGHIHIASTERR
QFNKRLSKRHNLNHFNASRTPPMRLKNEALHGGGSLSPLLQHHPKSAPSLLPRPRTFSFE
DIIAEDVFQKEPYGQDCSSPAACSSPYISVLTPATCPERRMIPCTTVFEFSNNTPAGMSH
SMKTVHENYFQNVPVTIPLHDVAYCVAVPSNQRIFLLTSRQGTCLVCRVYLFHRREKAQA
LTLALAKQFEKSYMEWQKMKQVKRKQSLVKAIEKSVGKNASTVGSKVIEQNNNVMDAIII
DDANKEYHRDTDSSPEESSDVEVNDTITVEMSREFTRRASCLDRPERLELGDGMTIEKLE
KNCENMVLSSDGFTTDEERDSDESPEHGVCDSGEEKSDTLRTCSFPSLCEEMRDVGSAET
EVIIQEEKFMDTEPARLDDQLKRCKQLTQTLYTLKKLATVQEARSKTPVSVLAGQSMTPR
PDTPSQYLASLMSVGTSSYSGRNQADEELRKTKNLILNDVRAVRVDSVHRMQSIQEAELR
RTRREKYTREYDSKKMEKALELAEKALRRTTHLNLVEERQKKHFNNMFMNMNGTNGENKL
TASLSESSSVESLPPPPPPMTSIKSNTAPLIQPEQSTYASSTCSMSTASSATVNLPLENL
LSPDGGYISSEILSPQHGGMLGKQRLVKVHSKPQPMQPALDNIPYSTHQIPVENPDFRQY
QYRSNSLQRNRSAAQQQTENYSDYQKQRSRTPNPFPASSVPYESQIYGQQQPAYQQQFQY
EAEVQYNVAETYQDPYTQQPQQYSLQYVSQNEMDQPYQNQRQYLPSSNSPRQQAQTQPMQ
YQQRSEESGNVKNQTNRYQQRQLRKPTNFASKLPNPAVHRVSSQKPTQASAEKASRYDAS
GYKSNSEILRRLMIFKRLKMGNDV

Nucleotide sequence

Length: 3,373

>Harore.CG.MTP2014.S152.g06011.01.t
TGTATATCTACTCAGTACAGTTCCAAATATACTCATAACTAAAGTTTATCTGGTGTGAGA
AAATGTCAGCACCTAGTAGTCCTTCCTTACTTGCTCGTCTGCGCGGAACGTCAAGCACTA
TCAAGAAAAAATTTCGCAAGGCGCAGTCTTTGAACTTACCATTGGATGCTGCTTCTCCTC
CGAGCACACCGAGTTTGGACAATTCAAGATTTGAATTATACGTTGAAGAAGTTGGGAATC
GGCAACCACATGCGTTCACTTGCAGGTATCTCGGTGAGATGTCCATATACACGCTAAATC
CCGAGCACTGCTACGGATTTGCCGAGAGTCTTGCAAAAAACTGCTCAGATCCTGATATGC
ACAACAAATGCAACATTATGATTCGCGAAGGACATATACACATAGCGTCTACCGAAAGAA
GACAGTTTAATAAGAGACTTTCAAAACGACATAATTTAAATCATTTCAACGCGAGTAGAA
CTCCACCAATGCGACTCAAAAACGAGGCCTTGCATGGCGGTGGTTCCTTGTCACCACTGC
TTCAACATCATCCTAAATCCGCCCCTTCGTTATTGCCACGACCAAGGACTTTTTCTTTCG
AAGATATAATTGCAGAAGATGTATTTCAAAAAGAACCTTACGGGCAGGATTGTAGCAGTC
CAGCAGCTTGCTCTTCTCCCTATATATCTGTTCTCACCCCGGCAACTTGTCCAGAGAGAA
GAATGATTCCGTGCACGACAGTTTTCGAATTTTCTAATAACACTCCAGCTGGTATGTCTC
ATTCTATGAAAACTGTACACGAAAACTATTTCCAAAATGTTCCAGTAACTATTCCACTGC
ACGACGTGGCATACTGCGTAGCAGTCCCGTCCAATCAAAGAATCTTTTTGTTGACTTCAA
GACAAGGCACGTGTTTGGTCTGCCGTGTGTATCTTTTCCACAGACGCGAAAAGGCACAAG
CGTTGACTCTAGCTTTAGCAAAGCAGTTTGAAAAATCCTACATGGAATGGCAAAAGATGA
AGCAAGTGAAGAGAAAGCAATCGCTCGTGAAAGCCATCGAAAAATCAGTTGGGAAAAACG
CTTCGACTGTGGGTTCAAAGGTCATAGAGCAGAATAACAATGTCATGGATGCGATTATCA
TCGACGACGCGAATAAAGAATACCACCGAGACACTGACTCAAGTCCCGAGGAGTCGAGTG
ACGTCGAGGTTAACGATACAATCACTGTGGAAATGTCTCGCGAATTTACCCGAAGAGCGT
CGTGCCTGGATAGGCCGGAACGTCTAGAGTTGGGAGACGGAATGACGATTGAAAAGTTAG
AGAAGAACTGCGAGAACATGGTGTTGAGCTCCGATGGATTTACAACGGATGAGGAGCGGG
ATTCTGACGAAAGTCCGGAGCATGGAGTATGTGACTCTGGAGAAGAGAAATCTGACACGT
TAAGAACTTGTTCATTTCCATCATTATGTGAAGAGATGAGGGATGTGGGCTCGGCGGAGA
CCGAAGTGATTATACAAGAGGAGAAATTCATGGATACAGAACCAGCCAGATTGGACGACC
AACTCAAAAGATGTAAACAGCTTACACAAACTCTTTACACTCTGAAAAAGTTGGCGACAG
TTCAGGAAGCTCGAAGCAAGACGCCGGTTAGCGTTTTAGCTGGTCAGTCAATGACACCAC
GTCCTGACACGCCGTCACAGTATCTTGCGTCGCTCATGTCAGTAGGTACGTCGAGTTACA
GTGGTCGTAATCAGGCCGATGAGGAATTGCGTAAAACGAAAAATCTAATCCTGAATGACG
TCAGGGCCGTGCGTGTGGACAGCGTTCATAGAATGCAGAGTATTCAGGAGGCTGAGCTTA
GGAGAACAAGACGGGAGAAATATACTCGAGAATACGACTCGAAAAAGATGGAGAAGGCAC
TGGAACTAGCAGAAAAAGCATTGCGGAGAACTACCCACTTGAATCTTGTCGAAGAGCGTC
AGAAAAAACACTTCAACAATATGTTCATGAATATGAATGGTACGAATGGAGAAAACAAGC
TCACTGCTTCGTTATCTGAATCGAGTTCCGTGGAGTCTTTACCGCCACCACCGCCACCGA
TGACGAGTATCAAATCGAATACTGCGCCTCTTATACAGCCTGAACAATCCACATACGCTT
CTTCTACGTGTTCTATGTCCACAGCGTCGTCTGCCACCGTGAATCTTCCCCTCGAAAACT
TGTTGTCACCCGATGGTGGCTATATAAGTTCGGAGATATTGTCACCTCAGCACGGAGGAA
TGCTTGGAAAACAAAGGTTGGTGAAAGTACATTCCAAGCCACAGCCGATGCAACCAGCTT
TGGACAACATTCCATACTCAACGCACCAAATACCCGTTGAGAATCCCGACTTCAGACAAT
ACCAGTATCGTTCGAATTCGCTTCAGAGAAATCGATCCGCTGCTCAGCAGCAAACCGAAA
ACTACAGTGACTATCAAAAACAGCGTTCAAGAACGCCAAATCCATTCCCTGCGTCATCAG
TGCCTTACGAATCTCAAATATATGGACAACAACAACCAGCTTACCAACAACAATTTCAAT
ACGAGGCCGAGGTGCAATATAATGTGGCAGAAACATATCAGGACCCATACACCCAGCAGC
CCCAGCAGTACAGTCTTCAATACGTGAGCCAAAACGAAATGGACCAGCCTTATCAAAATC
AGAGGCAATACTTGCCTTCTAGCAACTCTCCCCGACAACAAGCCCAGACGCAGCCGATGC
AGTACCAACAACGATCGGAAGAAAGTGGGAATGTTAAAAACCAGACCAATAGATATCAGC
AACGACAACTTCGTAAACCGACTAACTTTGCTTCAAAATTGCCGAATCCCGCCGTTCACA
GAGTATCAAGCCAAAAACCCACCCAAGCTTCAGCAGAAAAGGCATCCCGGTATGACGCCA
GCGGTTATAAATCCAACAGCGAAATCCTCAGACGTCTGATGATCTTCAAGCGCCTTAAAA
TGGGAAATGACGTGTGACAAATCCCTCTGTATTAAATTGTTTCGTGAATGGATTATTTTT
ATATTCAGCTGAACTCGAAAACATAGTTCAAATATTTCTGATACACGAACGGAGTTACTC
ACTAGTAGAGAGATGCGAATGTTAGAGAACGATGATTGGTTAGAGTTTGTTATTTCATAA
GCAATGTTGTTGCGTTGGGAATGAATTGAAAACGCGTACTGGAAATGATGATACAATATG
AATGTAATTCAGTTTGAGGTATATGTAGTAAACGGATATCTGAAAATTTGAAGCAACATC
CACTGTTTCGTTACGAAAATTGTTTTTTGTTATTGGACTTTGAGGTGAAAGGTTCCTCTT
TTTGCTTTTTTTT

InterProScan

Gene3D
PH-like_dom_sf (IPR011993) - T[213-325] 2.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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