Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S154.g09867.01.t

Possible name(s)

SLC10A2; SLC10A3; SLC10A5

Gene model

Harore.CG.MTP2014.S154.g09867

Location

S154 [182,881 / 184,336]

Sequences

Amino acid sequence

Length: 484

>Harore.CG.MTP2014.S154.g09867.01.p
MSISGSNMFHYQALFLSLYLLNCSSKLAYGGTNTQTDANIVNDVNLLVSGNFPKVETFED
FTFNMTLNCSKYLAIMEQLFSNKTFTKPSTFQLVLHINDSDIANFCEANGSASSYSIKCR
DNTSKVVALNAGHLGITGMWMEVLRDDNLHVKLDDVQIRVKREFTLFDKLSFFILGPLVL
LNKCAFGAKIEINVMKHIFTQPLALTLCLLMQFVAMPLLAVLYSKLFLLSQDMALALFVG
AVCPGGGGGYVISYLVGGDVTLAISASLLSTVVAMGAMPGVVGVYTYIFQIPDNIAIPYI
KILLMLLAIAIPISTGMFINYKWPKFAKKFVRIIHPLSLFLIFSGLAYLAVSSKYIIHGP
VIGWALAVCLPMSGFILSILFARALGLSWPFSKAISLESGMKNTVLGIAVIELSYPQPEA
DLASILIIMVTLGHTTLAMLWYFVHLMRIRCCKTTEVRFSKLTSLDADDDEDSMETARFL
TSKN

Nucleotide sequence

Length: 1,455

>Harore.CG.MTP2014.S154.g09867.01.t
ATGTCCATTTCAGGTTCCAATATGTTCCATTACCAAGCATTATTCCTTTCTCTTTATTTA
TTGAATTGTTCTTCAAAACTGGCATATGGAGGAACCAATACCCAGACAGATGCAAACATC
GTAAACGACGTTAATCTCCTCGTCTCAGGAAATTTCCCGAAAGTTGAAACCTTCGAGGAC
TTTACTTTCAATATGACATTAAATTGCAGTAAATATCTGGCAATAATGGAGCAGCTGTTT
TCAAACAAAACTTTCACAAAACCTTCGACTTTTCAATTGGTTCTTCACATCAACGACTCT
GACATCGCTAATTTTTGCGAAGCAAATGGATCTGCGAGTTCATATTCGATCAAGTGTCGA
GACAACACATCCAAGGTGGTTGCCCTGAACGCCGGACATCTTGGAATTACTGGGATGTGG
ATGGAAGTTCTTCGAGATGATAATTTACATGTAAAACTCGACGACGTGCAAATCCGTGTC
AAAAGAGAATTTACACTGTTTGATAAACTATCTTTTTTCATACTGGGTCCTCTCGTTCTC
TTAAACAAATGTGCGTTCGGGGCCAAGATAGAAATTAACGTGATGAAGCATATTTTTACT
CAACCGCTAGCATTGACCCTTTGTTTATTGATGCAGTTTGTTGCGATGCCTTTACTTGCC
GTCCTTTATTCAAAACTGTTCCTCCTGTCCCAGGATATGGCTCTAGCATTGTTTGTCGGT
GCAGTGTGCCCTGGCGGTGGTGGTGGTTACGTCATAAGTTACTTGGTGGGCGGAGACGTC
ACGCTAGCCATATCCGCCAGCTTGCTTTCAACCGTGGTTGCGATGGGTGCTATGCCAGGG
GTGGTCGGTGTGTATACATACATTTTCCAAATACCAGACAACATAGCGATACCATACATC
AAGATATTACTAATGCTTCTTGCAATCGCCATTCCGATTTCGACGGGAATGTTCATTAAT
TATAAATGGCCGAAGTTCGCTAAAAAGTTTGTCAGAATCATCCATCCTCTGAGTCTGTTT
CTTATTTTCTCTGGTTTAGCGTACCTTGCTGTATCTTCAAAGTATATCATTCATGGTCCT
GTCATCGGCTGGGCTCTGGCGGTGTGTCTCCCTATGAGCGGTTTTATCCTGTCCATATTA
TTTGCGAGGGCCCTCGGTCTTAGCTGGCCTTTTTCCAAAGCGATTTCCTTGGAAAGTGGA
ATGAAGAACACGGTATTGGGCATAGCAGTTATTGAGCTGTCCTATCCCCAACCAGAAGCT
GACCTAGCATCCATTCTCATCATTATGGTCACTCTCGGACACACCACTCTTGCTATGCTC
TGGTATTTCGTACACCTGATGAGAATCCGGTGCTGTAAAACTACTGAGGTCAGGTTTTCC
AAACTGACTTCGCTGGACGCCGATGACGACGAAGACTCGATGGAAACTGCTCGGTTTTTA
ACTTCAAAAAATTGA

InterProScan

PANTHER	SLC10A3 (IPR030210) - T[157-452] 1.6E-67
PANTHER	Bilac:Na_transpt (IPR004710) - T[157-452] 1.6E-67
Pfam	BilAc:Na_symport/Acr3 (IPR002657) - T[178-354] 9.4E-25

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
NTCP2_HUMAN	30.417 %	124	1.52E-31
P3_HUMAN	37.452 %	159	2.91E-43
NTCP5_HUMAN	31.443 %	152	5.81E-41