- Transcript 'Boleac.CG.SB_v3.S293...' >
- Transcript 'KH2012:KH.C1.289.v1....' >
- Transcript 'Boleac.CG.SB_v3.S49....' >
- Transcript 'Moocul.CG.ELv1_2.S89...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S154.g10051.01.t
Possible name(s)
BIRC6; UBE2O; UBE2Z
Gene model
Location
S154 [28,186 / 38,546]
Amino acid sequence
Length: 1,218
>Harore.CG.MTP2014.S154.g10051.01.p
MSEPTFYPDDLVVGKSRNGKYKFALVENVAGIEDSDDSSDSELEDFPKVSLDEGSIRVVW
YPEGKTEILHETNVQLVDRSCLPRDVVRKEIGNQLGTVISGKVISDVVVLGTSKTLKGLD
ASNLKRIVTLPVGKGSDGFTYLLASGQTHLWSPKFKEMFACPNNQYIYRNHFAMEKCHQM
KHNIIMGKLDMDSDGTAVLTDVYPHPSTDYSFNEDAFYPGQYLFGTHVAFQDIEWISGTP
MQFKAKLKYRVLVEQVGCDKLNVKWAKLEDMKIQGKKNDTDDVSGDAAAATAATAATAAT
AADNNVVEEAKKMSFASNIPEVPGDISGDDLKKVEGLDHFWYCHVCLGQRYLYQLTEKDA
EDLNQQKNRKLKKNKRKKIATRSENQHGRPSSSSSSRKRKTRAIRSQNDSCSSSGNDDSA
YDEEDMDDPVPDEGQSALEPSSGACGSVLVKDKSKPREDIEVVVNSESDINITSPTGKPP
TVLGSLSCYVSGFELEFFLIQENVDGKTKWKFQCNIQNPECPKSVLENVSAQFLCFMKSL
LKKNKHLVDASSCVAIMSQCPLAIRKFILEQPSIACEQITFEYEADRKRTCGIINEAGEM
SEIEYVVEDKKTEIDQPKAEKVNQASQSGYCGVTACPPCKRQAGPNIRYHGGQYISVEIT
RTSSTVDVQWQDGSIERDLSTLTLLPAHHVDDNDFCPGDFVVSEAKNGAYGMVLTADSTN
RMTKIQWFDKGSPVEIEEVSAYDVEDYHALHFRISDIVVRVDTFIREIQSEITDSQVIGE
ILNINHHGMLDVLWSDGTRAEIHHQNVFAIQSEEDESGLFDTSDEDDDEFPSEGSWITAS
SGSTTSLEDESEKGDNGGGDGPDPNQEAGGDGGDNETEHESLDFPEILQEDDANNNLDDK
CKDEELGPEVGGEPVASISSLDTSTSSISDGHESSVSSFTVIPSVPVTHHFILRDSVPAQ
VKTFMKALKRDIRLLQTSLSPGISVKAFEDRMDLLSVLIEGPERTPYQDGLFAFDVYLPQ
QYPSSPPSVHYVSYSPRLNPNLYEMGRVCVSLLGTWSGKGSEKWTKDSTLLQVLLSIQGL
ILNSEPYYNEAGYEGHRGSAEGKKNSRCYNEMVILRLVQHMCALVPKPFVPFAEEVKTFC
KDHIPLLLKRAREIITVTKNMDKNDDTTENDDSADRTDLESKYGFPLLPLSRGVIISLEA
SLNDLENASKKEGIIEAT
Nucleotide sequence
Length: 3,657
>Harore.CG.MTP2014.S154.g10051.01.t
ATGTCGGAACCCACTTTCTATCCGGATGATTTGGTCGTTGGAAAATCGAGAAACGGAAAA
TATAAGTTTGCGCTTGTTGAAAATGTTGCAGGGATTGAAGATTCTGACGATTCGTCTGAT
TCTGAACTCGAAGATTTTCCAAAAGTATCTCTGGATGAAGGATCCATCCGTGTAGTCTGG
TATCCGGAAGGAAAAACTGAAATATTACATGAGACAAATGTCCAACTTGTGGACCGTTCC
TGCTTGCCAAGGGATGTCGTTCGCAAAGAAATCGGCAATCAGCTTGGTACAGTGATATCC
GGCAAGGTCATTAGCGATGTCGTTGTGCTGGGAACAAGTAAAACCTTGAAAGGTCTCGAT
GCTTCGAATCTGAAACGAATTGTGACTCTGCCTGTAGGTAAAGGCAGTGATGGATTTACC
TACTTGTTGGCCTCAGGTCAAACCCATCTGTGGTCCCCGAAATTTAAAGAAATGTTTGCA
TGTCCTAATAATCAATATATATACAGGAATCATTTTGCAATGGAAAAATGTCATCAAATG
AAGCATAATATTATAATGGGCAAGCTGGATATGGACAGTGATGGGACGGCTGTTCTAACC
GATGTATATCCTCATCCGAGCACCGATTATTCCTTCAATGAAGATGCATTTTATCCCGGT
CAATATCTTTTCGGGACTCACGTTGCTTTTCAAGACATTGAATGGATTTCTGGAACCCCG
ATGCAGTTCAAAGCAAAACTGAAATATAGAGTTCTGGTGGAACAGGTTGGTTGCGACAAG
CTCAATGTTAAATGGGCAAAATTGGAAGACATGAAAATTCAGGGAAAGAAGAACGATACT
GATGATGTGTCAGGTGATGCTGCTGCTGCTACTGCTGCTACTGCTGCTACTGCTGCTACT
GCTGCTGATAATAATGTTGTTGAAGAGGCAAAAAAAATGTCATTTGCATCAAATATTCCT
GAAGTTCCAGGTGATATATCTGGCGATGATTTGAAAAAAGTTGAAGGACTGGATCATTTC
TGGTATTGTCATGTTTGTCTGGGACAACGATACCTTTATCAATTGACGGAAAAAGACGCA
GAAGACTTGAACCAGCAGAAGAACAGGAAGCTGAAAAAAAATAAAAGAAAGAAAATAGCA
ACAAGATCCGAAAACCAACACGGAAGACCTTCATCCTCTTCATCATCTAGAAAAAGGAAG
ACTCGAGCTATCCGTTCCCAAAATGACTCATGCAGTTCTTCAGGAAATGATGATTCAGCA
TATGACGAAGAGGATATGGATGACCCCGTGCCTGATGAAGGTCAAAGTGCTCTTGAGCCA
TCTAGTGGAGCATGTGGCAGCGTTCTTGTTAAAGACAAATCAAAACCGAGAGAAGATATT
GAGGTCGTTGTTAACTCCGAAAGTGATATAAACATAACATCACCTACAGGCAAACCACCG
ACCGTACTTGGATCATTATCCTGTTATGTCTCCGGATTTGAACTTGAATTCTTTTTGATT
CAAGAGAATGTAGACGGGAAAACGAAATGGAAATTTCAATGCAATATTCAGAATCCGGAG
TGTCCAAAGTCCGTCCTGGAGAACGTAAGCGCCCAGTTCCTCTGCTTCATGAAGTCATTG
CTGAAGAAAAACAAGCATTTGGTCGATGCGAGTTCTTGCGTAGCGATTATGTCTCAGTGT
CCTCTTGCGATTCGAAAATTCATCCTTGAACAACCTTCGATCGCTTGTGAACAAATTACA
TTTGAATATGAAGCTGACAGAAAAAGAACTTGTGGAATCATTAATGAAGCAGGAGAAATG
TCAGAAATTGAATATGTCGTAGAGGACAAGAAGACTGAAATTGATCAACCCAAAGCAGAA
AAAGTCAATCAAGCAAGTCAGAGTGGGTATTGCGGTGTAACCGCGTGTCCACCATGCAAA
AGACAAGCCGGACCAAATATACGATATCATGGTGGACAATATATTTCAGTAGAGATCACT
CGAACATCATCAACAGTTGATGTACAGTGGCAAGATGGTTCAATAGAGAGAGATTTATCG
ACACTGACACTGCTTCCTGCTCATCATGTTGACGATAATGATTTTTGTCCGGGAGATTTT
GTTGTATCTGAAGCAAAAAATGGCGCTTACGGGATGGTTTTGACTGCTGACAGCACAAAT
CGGATGACGAAGATACAATGGTTTGATAAAGGATCTCCTGTTGAAATTGAAGAGGTCAGC
GCATACGATGTAGAGGATTATCATGCCTTGCATTTTCGAATCTCTGACATTGTTGTGCGA
GTTGATACCTTCATAAGAGAAATTCAATCGGAAATTACAGATTCCCAGGTTATTGGAGAA
ATTCTAAACATCAATCATCATGGTATGCTTGATGTTTTATGGTCAGATGGAACAAGGGCT
GAAATTCACCATCAGAATGTGTTTGCGATTCAAAGCGAAGAAGATGAGAGTGGATTGTTT
GATACATCTGATGAAGATGATGATGAATTCCCATCAGAAGGAAGCTGGATAACAGCGTCA
TCAGGAAGCACAACCTCCCTGGAGGATGAATCCGAGAAAGGTGATAATGGAGGTGGAGAT
GGACCGGATCCAAACCAGGAGGCTGGAGGCGATGGGGGTGATAATGAGACGGAGCACGAA
TCTCTGGATTTTCCAGAAATCCTGCAAGAGGATGATGCCAATAATAACTTGGATGATAAA
TGTAAAGATGAAGAGCTTGGTCCTGAAGTTGGTGGGGAACCTGTGGCTTCAATTTCTTCA
TTGGATACATCTACGAGCAGTATTTCTGATGGTCATGAGTCATCAGTTTCCTCTTTTACT
GTTATACCATCTGTTCCTGTGACTCATCATTTCATTCTTCGTGATTCTGTACCAGCACAA
GTAAAGACTTTTATGAAAGCTCTGAAAAGAGACATCCGTCTGTTGCAAACCTCATTATCC
CCAGGAATCAGTGTTAAAGCATTTGAAGATAGAATGGATCTTTTATCCGTTCTCATTGAA
GGTCCGGAACGAACCCCGTACCAAGATGGGTTATTTGCTTTTGATGTCTATCTCCCCCAG
CAGTACCCATCCTCACCCCCGTCAGTGCATTACGTGTCATACTCGCCTCGACTGAACCCC
AACTTATATGAAATGGGTAGGGTTTGTGTGAGTTTATTGGGAACATGGAGTGGAAAGGGA
AGTGAAAAATGGACAAAAGATTCAACCCTGCTGCAAGTTCTCTTGTCTATACAAGGTTTA
ATTTTGAACAGTGAACCATACTACAATGAAGCTGGGTATGAAGGACATCGTGGTTCAGCA
GAAGGGAAAAAGAATAGCAGATGTTACAATGAAATGGTAATCCTTCGTCTTGTACAACAC
ATGTGCGCTCTGGTTCCCAAACCCTTTGTGCCGTTTGCAGAAGAAGTCAAAACATTTTGT
AAAGATCACATTCCGCTCTTACTCAAACGTGCACGTGAAATCATCACTGTGACAAAAAAT
ATGGATAAAAATGATGATACGACAGAAAATGATGACTCAGCGGATAGAACAGATCTGGAG
AGCAAATATGGATTCCCACTTCTGCCTCTCTCTCGTGGCGTCATCATAAGTTTGGAGGCA
AGTTTAAATGACCTTGAAAATGCTTCCAAGAAGGAAGGAATCATTGAGGCAACATGA
| Gene3D |
UBQ-conjugating_enzyme/RWD (IPR016135) - T[932-1184] 2.7E-67 |
| SUPERFAMILY |
UBQ-conjugating_enzyme/RWD (IPR016135) - T[949-1123] 4.38E-37 |
| CDD |
UBQ-conjugat_E2 (IPR000608) - T[965-1115] 5.7282E-36 |
| ProSiteProfiles |
UBQ-conjugat_E2 (IPR000608) - T[966-1086] 22.617 |
| Pfam |
UBQ-conjugat_E2 (IPR000608) - T[968-1113] 1.0E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBE2O_HUMAN | 56 % | 237 | 1.32E-63 |
| BIRC6_HUMAN | 52.273 % | 147 | 2.55E-35 |
| UBE2Z_HUMAN | 32.642 % | 99.8 | 2.77E-22 |