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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S154.g12299.01.t

Possible name(s)

VPS72

Gene model

Harore.CG.MTP2014.S154.g12299

Location

S154 [115,496 / 119,181]

Sequences

Amino acid sequence

Length: 327

>Harore.CG.MTP2014.S154.g12299.01.p
MAASREPRKNAGNRMGKALEEELDGDDFYKTTYGGFEEEQEDVDFHSEQGDSGDEVDSDF
DISETDEMVSDQDEESILKQEKQQKKKSAASSKAYKEPTKKRTNEMPDESDIPSTSSTPP
QPKEERKEKIKDNQNNFDAPSRKSSRRQTAANTYMIGLKVKERKLADKKKKETTKKPMVG
VRRLTEEELMQEAERTEKKNLKSLHHYQRMEEKRKKSKVKKRSFMEPTIKYVSTTMPCTE
ISEVDGVRKETEYRVSRDFIIFSNKEILEKEFHWSKPKRMNKLYCPVTKKIARYIDPLTN
IPYYDIEAFKLIRKAYKMTPTRKEKPK

Nucleotide sequence

Length: 1,438

>Harore.CG.MTP2014.S154.g12299.01.t
CGAGGATGTATTGTTGTAGGTGTAGAACTGTAAATAGTTCGCAAGTATTGGCGGATTTGA
TATCATCGGTATATCGACAGCGGGAAGTTAGTTCGTTCAGAATCTGTAGATGGTGAGATG
GCTGCGTCCAGAGAACCAAGAAAAAATGCAGGAAATCGAATGGGAAAAGCTCTTGAAGAG
GAATTGGATGGAGATGATTTCTATAAAACGACTTATGGAGGATTTGAAGAGGAGCAAGAG
GATGTTGATTTTCATTCAGAACAAGGAGATTCTGGAGATGAAGTTGATTCGGATTTTGAT
ATTTCTGAAACGGATGAAATGGTCAGCGATCAGGATGAAGAGAGTATATTAAAACAGGAA
AAACAACAGAAGAAAAAATCCGCTGCCTCCTCAAAAGCTTACAAAGAGCCAACGAAAAAA
CGAACAAACGAAATGCCGGATGAATCCGATATACCGTCAACATCAAGTACACCTCCACAA
CCGAAGGAAGAAAGGAAAGAAAAAATTAAAGACAATCAAAATAATTTTGATGCACCAAGT
CGAAAATCTAGTCGACGTCAAACAGCAGCTAACACATACATGATCGGTTTGAAAGTAAAA
GAAAGAAAACTAGCTGACAAAAAGAAAAAAGAAACCACAAAAAAACCCATGGTTGGGGTA
AGACGTTTGACAGAAGAAGAACTGATGCAAGAAGCCGAGAGAACCGAGAAGAAAAATTTA
AAATCTTTACATCATTACCAACGAATGGAAGAGAAAAGAAAAAAATCTAAAGTGAAGAAA
CGATCATTTATGGAACCAACAATAAAATATGTATCTACCACAATGCCTTGTACTGAGATT
TCGGAAGTTGATGGAGTAAGAAAGGAAACAGAATATCGAGTCTCCAGAGATTTTATAATA
TTTTCGAACAAGGAAATCCTGGAGAAGGAATTTCATTGGTCAAAACCTAAGCGAATGAAC
AAGCTCTATTGTCCGGTGACCAAAAAAATTGCAAGATACATCGATCCTTTGACTAATATT
CCTTATTATGATATTGAGGCTTTCAAACTAATCAGGAAGGCTTATAAAATGACTCCTACA
AGAAAGGAAAAGCCAAAATGACAGTAAGTATTTCAAACTCAGAATTGTTTGAAGTCTGAA
TCAATTTTCCCCATTAGGAATAATGGAAATTGAATTAATCCGTTCCCGCACCCATTTCAA
TAAACTTGAAAAGCAAATACACATGAAAATTACATAATTAAATCCCCTAAATACAGTCAA
AGCTTGTTACTTCGACGTCTGTTAGCGGTTAGCATGAAATTCAGAGTTATGACATAGCGC
TGTTTATACCTATTTTCACACTAACTATGGAGCAATAAGCACTTGTTATTTTAGTAGTAG
TTAATAATTAACTGCAGCTGAGTTTCGGCAATAAATGGGCTTTCCATCATAAACGATC

InterProScan

PANTHER
Vps72/YL1 (IPR008895) - T[4-323] 2.1E-72
Pfam
Vps72/YL1 (IPR008895) - T[5-233] 6.2E-41
SMART
Vps72/YL1_C (IPR013272) - T[283-312] 1.7E-11
Pfam
Vps72/YL1_C (IPR013272) - T[284-312] 3.3E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS72_HUMAN 38.416 % 176 2.35E-52