Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S156.g15165.01.t

Possible name(s)

PAFAH1B2; PAFAH1B3

Gene model

Harore.CG.MTP2014.S156.g15165

Location

S156 [167,654 / 169,071]

Sequences

Amino acid sequence

Length: 216

>Harore.CG.MTP2014.S156.g15165.01.p
MTSCNPATIPVKIEDVQGDRRWESLHEEFCHQSHDKEADIVFIGDSLVQLMAHVADWDKR
LAPFHCFNFGIGGDRTEHVLWRTLNGELDNVKPKAVVLWCGTNNHGDAPELIAEGIIKIA
KEIILKQPECTVIILSLLPRGKSPNPLRERNEKTNQIVEKHSSKHSHMRYLDVSEGFVST
DGTISVTDMYDYLHLTRHGYQKIIDLLVDELISIVG

Nucleotide sequence

Length: 1,036

>Harore.CG.MTP2014.S156.g15165.01.t
TGGTGTTTCACTGGCGCAGTGACAGCTTCACCCTGGTGTTAAAATTAAATGTCAGTCTGA
GTTTGATTAGTTTAATGTTAAAAAAATCAATATTTTACCTGAAAACTATAACTGAACATG
ACTTCCTGCAATCCTGCGACTATTCCTGTTAAAATAGAAGACGTGCAGGGTGACAGAAGA
TGGGAGTCTTTGCATGAAGAGTTCTGTCACCAAAGCCACGATAAAGAGGCGGATATTGTA
TTTATAGGGGACTCTTTGGTTCAGCTAATGGCCCATGTTGCAGACTGGGATAAACGTCTT
GCGCCATTTCATTGCTTCAACTTTGGCATAGGAGGTGATAGAACAGAACATGTCCTTTGG
CGAACTCTCAATGGGGAACTTGACAATGTGAAACCAAAAGCAGTCGTGTTATGGTGCGGA
ACAAATAACCATGGTGACGCTCCAGAACTGATCGCAGAAGGCATCATAAAAATCGCAAAA
GAAATCATATTAAAACAACCAGAATGCACCGTAATCATTCTAAGTCTGTTACCACGCGGG
AAATCACCAAATCCGTTACGCGAAAGAAACGAAAAGACCAACCAGATCGTTGAAAAACAT
TCAAGTAAACATTCCCACATGAGATACCTCGATGTCAGTGAAGGTTTTGTTTCGACCGAT
GGTACAATATCTGTTACAGATATGTATGATTATTTACATCTAACGCGTCATGGTTATCAG
AAAATCATTGACCTGCTTGTTGACGAACTGATAAGCATTGTAGGTTGATCAGTAAATAAT
ATGTTTCGTTGGGTGTTGTAATTGTTCATCAAACTTACGATGTGAAATATAAGGTAAAAG
TCATCACATTTATACATGAGTTGATCAACAGTATAAGACAGGGATGGGAAACTTTGCAAG
TCCATGATCGATGGCAATCAACTTTTTTGTAAAAAGAGCTGCCTGGGGCCCAGATGACCA
ATAATTCTATCAACTAACTAAAGCAATTATATATTACATCACAATACACTTGTTATAAGG
AAGTTTCTACAATCTA

InterProScan

Gene3D	SGNH_hydro_sf (IPR036514) - T[2-215] 2.6E-54
Pfam	SGNH_hydro (IPR013830) - T[43-202] 6.9E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PA1B3_HUMAN	52.764 %	229	3.25E-76
PA1B2_HUMAN	51.759 %	224	1.4E-74