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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S8...' > 
  2. Transcript 'KH2012:KH.S1366.1.v1...' > 
  3. Transcript 'Cisavi.CG.ENS81.R27....' > 
  4. Transcript 'KH2012:KH.L170.28.v2...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S156.g15165.02.t

Possible name(s)

PAFAH1B2; PAFAH1B3

Gene model

Harore.CG.MTP2014.S156.g15165

Location

S156 [166,833 / 169,092]

Sequences

Amino acid sequence

Length: 216

>Harore.CG.MTP2014.S156.g15165.02.p
MTSCNPATIPVKIEDVQGDRRWESLHEEFCHQSHDKEADIVFIGDSLVQLMAHVADWDKR
LAPFHCFNFGIGGDRTEHVLWRTLNGELDNVKPKAVVLWCGTNNHGDAPELIAEGIIKIA
KEIILKQPECTVIILSLLPRGKSPNPLRERNEKTNQIVEKHSSKHSHMRYLDVSEGFVST
DGTISVTDMYDYLHLTRHGYQKIIDLLVDELISIVG

Nucleotide sequence

Length: 1,877

>Harore.CG.MTP2014.S156.g15165.02.t
CGGCCTTTGACAGTTTCACACTGGTGTTTCACTGGCGCAGTGACAGCTTCACCCTGGTGT
TAAAATTAAATGTCAGTCTGAGTTTGATTAGTTTAATGTTAAAAAAATCAATATTTTACC
TGAAAACTATAACTGAACATGACTTCCTGCAATCCTGCGACTATTCCTGTTAAAATAGAA
GACGTGCAGGGTGACAGAAGATGGGAGTCTTTGCATGAAGAGTTCTGTCACCAAAGCCAC
GATAAAGAGGCGGATATTGTATTTATAGGGGACTCTTTGGTTCAGCTAATGGCCCATGTT
GCAGACTGGGATAAACGTCTTGCGCCATTTCATTGCTTCAACTTTGGCATAGGAGGTGAT
AGAACAGAACATGTCCTTTGGCGAACTCTCAATGGGGAACTTGACAATGTGAAACCAAAA
GCAGTCGTGTTATGGTGCGGAACAAATAACCATGGTGACGCTCCAGAACTGATCGCAGAA
GGCATCATAAAAATCGCAAAAGAAATCATATTAAAACAACCAGAATGCACCGTAATCATT
CTAAGTCTGTTACCACGCGGGAAATCACCAAATCCGTTACGCGAAAGAAACGAAAAGACC
AACCAGATCGTTGAAAAACATTCAAGTAAACATTCCCACATGAGATACCTCGATGTCAGT
GAAGGTTTTGTTTCGACCGATGGTACAATATCTGTTACAGATATGTATGATTATTTACAT
CTAACGCGTCATGGTTATCAGAAAATCATTGACCTGCTTGTTGACGAACTGATAAGCATT
GTAGGTTGATCAGTAAATAATATGTTTCGTTGGGTGTTGTAATTGTTCATCAAACTTACG
ATGTGAAATATAAGGTAAAAGTCATCACATTTATACATGAGTTGATCAACAGTATAAGAC
AGGGATGGGAAACTTTGCAAGTCCATGATCGATGGCAATCAACTTTTTTGTAAAAAGAGC
TGCCTGGGGCCCAGATGACCAATAATTCTATCAACTAACTAAAGCAATTATATATTACAT
CACAATACACTTGTTATAAGGAAGTTTCTACAATCTAGCCAAACAACTACCTGCGAGCAA
ACCAGTCCGATCATGATTGACACTTTAACGATTTCTAATAAAGGGATTGAGCAATGTCAC
TCGGCATGCGAGCCTTGTAGTTTTGGATTTTTAAAGGAGAATCATGACCTTCCATAATAC
AAGCACTCCTCACTTAACGACCATATTCCATTCAGAACGGTCGCAAAAATATCTTGAGAT
ATTGTTTTAATGACACCCGACGGCTATTAAAGTCCATGAGAGAGTGGGAAGTTACAAAGT
ATCAGTTTTATAGAAATATTGTTAAAGTCCAATGGGAACATTATTTAACTGTCAAATGTG
AGCAGTTGTTAACTGAGGAATACTTGTCTATACATGAATTTTATATCCATTTTCTCTCGT
TTAAAAATACTGCCATGAATGAATAGTACATTCCTTAGATTGCAATTACTTTTAAGTCTT
CAATTCATGCTGTTATTTTTAGTTCCATATCATGTACAATTTTGAGGAATTTTCTGGTAT
ATTTTTTTTTACACATAATCCGCATTTGAACAAAATTTCTTTGAATTAGTGTTGTTGTCT
TTAAGTAGTAGTTGTTGTTGTTGAAAGCATGTGAACAAGTATTGTGACATACATGAAACC
CAATAAGGGAAATGGAAGTATTCCAGTCTGACCACCCTGATAATAAGTTTATACAAATAT
CATATCGAAATGACCTTTATACTCTTATATGCCGAAAAATGTTGTATTCTACTGTTCTCG
GAAGTTGCAATTATGTTTTTTTGTCCACTTTATCAATTCTTTGCACTTTACTGCAATAAA
TTCAGTGTAAAGACACA

InterProScan

Gene3D
SGNH_hydro_sf (IPR036514) - T[2-215] 2.6E-54
Pfam
SGNH_hydro (IPR013830) - T[43-202] 6.9E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PA1B3_HUMAN 52.764 % 229 3.25E-76
PA1B2_HUMAN 51.759 % 224 1.4E-74