Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S15.g09768.01.t

Possible name(s)

GTSF1; GTSF1L

Gene model

Harore.CG.MTP2014.S15.g09768

Location

S15 [506,891 / 513,691]

Sequences

Amino acid sequence

Length: 293

>Harore.CG.MTP2014.S15.g09768.01.p
MSNHDYHSQSTSNDADKDAMVICPYDPVHRIAANRFVRHILKCRKNHPTMEMETCPFNAR
HIVPKPDLRHHIKNCPDKRLLEIDMHHQSDPSEHELIRSSENLDFQTDEDWTKEPRENEH
VKEASITSSFPTTASVTTDGKRVNARREAIKRMKAKMKEEMNRMPELVPQHKRPTAPENC
FDSPPYVFVHDSLIGRDSGSNHPNFLERRDQSGGDSASDRKHRPMLAANFSLNGHNGCGD
ASQSDINRIAISSDSEKSFSVGRGRRNPNHNNIFGNVTFTGLSQLGNDGILFE

Nucleotide sequence

Length: 975

>Harore.CG.MTP2014.S15.g09768.01.t
ATGTATCATTCCATTTCAATGTTGTTGGCTCATAATTAAATTACTAGCAAGGTTTTAAAA
GCGAAGATATCGATTATAACGAAGTCATCTGAGATGTCGAATCATGATTACCACTCGCAG
TCGACTTCCAATGACGCAGATAAAGATGCAATGGTCATCTGCCCCTATGATCCAGTGCAC
AGGATAGCTGCCAATAGATTCGTTCGCCACATATTGAAGTGCAGGAAAAACCATCCCACT
ATGGAAATGGAAACTTGTCCCTTCAACGCCCGACATATCGTTCCCAAACCAGATCTTCGG
CATCACATAAAGAACTGTCCTGACAAGAGACTTTTGGAGATAGATATGCATCATCAGTCA
GATCCGTCAGAGCATGAGTTGATTAGATCAAGTGAAAATCTTGATTTCCAGACCGATGAA
GACTGGACTAAAGAGCCACGAGAAAACGAGCACGTGAAAGAGGCTTCCATAACCTCTTCC
TTTCCTACCACGGCCAGTGTTACAACAGATGGCAAACGAGTAAACGCGCGACGGGAAGCT
ATCAAGAGAATGAAGGCTAAAATGAAAGAAGAAATGAATCGGATGCCAGAACTTGTCCCA
CAACACAAAAGACCTACTGCGCCAGAAAACTGTTTCGACTCCCCTCCTTACGTATTTGTG
CATGACTCGTTGATTGGCAGAGATTCTGGGTCAAACCATCCAAATTTTCTGGAAAGACGA
GATCAAAGTGGTGGAGACTCTGCGAGTGATAGAAAGCACAGACCAATGCTTGCAGCTAAT
TTTTCCCTTAACGGCCACAATGGTTGTGGTGATGCGAGTCAATCAGACATAAATAGGATT
GCAATATCTTCAGATTCTGAGAAAAGTTTTTCTGTTGGTAGAGGAAGGCGAAATCCGAAT
CACAATAATATATTCGGCAATGTCACCTTTACTGGTTTGTCACAACTAGGAAATGATGGA
ATATTATTTGAATGA

InterProScan

SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[19-50] 3.45E-7
Pfam	TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[20-44] 2.8E-9 - T[52-76] 1.4E-8
ProSiteProfiles	TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[20-47] 16.345 - T[52-79] 16.984

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GTSF1_HUMAN	39.64 %	89.4	8.59E-22