- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S162.g04142.01.t
Possible name(s)
SMCHD1
Gene model
Location
S162 [75,268 / 97,698]
>Harore.CG.MTP2014.S162.g04142.01.p
MMSDEDAYVIVYDRRQTSEEGKKITIGGVFCYNEFIQKIKQMTCFVCWIVISVCDHDLCD
WVLISIVCPSHDINLVEDDEFVVTTTNRNPVVDDDSYVKLIESGDTLYILESIDQPLLAP
VSEKIEFQPHYDTLIKSGIYEYYASEGHVNPLPFAFAELIDNALAATVNNRGSRNIDLTL
QFDDSSSGQSTICVSDNGMGMSSRQLNNWAIYRLSKFNRKETKQRRNIFEDDVLSSGTSH
SMEPKLKYMMDAPKSLNSDISWFGVGGKQAIFFIGSATRIISKPFNSCDVHEFTLSKDEF
RRKEANRETIYSGYIRNRKAGDSSHITGNEEVTRQLIATETDEGRADTGFTSVIITGIDP
KHITFMKQGFGVWTRQLSHIYHYYIHGPEGNTAMSRKRRNVGALDVNLNITMHERGKPSV
TVDLRQINDDLESQYIRTACNSFEFKAKTDGGSGIVEGIIRYHPFMYDRETFPLDPNADD
DFSDYEAPDEPPARGRRPIFECYWNGRLIPYTFVDDFDWCRAPRKRGNIPLECYSRVSGC
LFTNDRFQVSTNKLTFIDLEAKLRDRSTVFTRMILGQEQRAHIQRQFNDWLRECHEKYDK
QVKFLNFIESYPRTDIFGRKPITVYGAIEWDGKIFKEGQLVRTQRTTPVVLGRIKRFLLL
GAHEGDVFAVGGEMEMVQEPESLYGEIRRFPLTKLDRVVSSSVVLDLIQEEEQKLPDKLV
LSWPEGNEVKDGDSRQIGMTIGRCTWFSGAMRIEIHNRRNESLQKLPSNAGGRKLLIEQR
FTYTPSVRGSSPREIASHVTSHGRTWPYWFKKMDNIKSLGTYTIHLQTVLNESEASTYAD
GRTLPHMKISFTIREAPPSRFLVGILESPLRIGEPFDIPLELQDKYGHPTEAAVSDKPII
ESEELDISFDSVECKGNTLVMKSVVAIGSVISQHGKSFTVTVIIPGLERESQTMKIRLLP
GKPHSIKILSLTKNGDKQEVNKDDGEEDSDLEHSGYHFEIENLSNISLDVAVIDLARNVT
LQSNLLVQAKFPPSCGVSPMKCDCSMSGQGVLSGRIAMKKLKKETKIIKTKIEILGCKNT
ESVLCSFAVQPSTKVSAIEIFYVDPNNEEEINLKSGSDIRWPAGDILTKLSFRLLDEVKR
EVTLNKNICSGLKVNWTNRVSIEQLCASELPNIRVPTNMTDVKFCQVVFAGQKNLEFSFS
IRPIAGEPAALKCKIVGSRVTQIGVIRDSPVAVTILDCYGNKLPIKEGQFNSLRVTGEGL
DETLVVKTIENNQFLLNNIQFNEGPLGSRELCVVYGNDDTIKEYVLLQLVAGTPAMIEVQ
GWTDIEKPLAILSGTRIPEPIKVQLKDGWGNPSPLLGVKVLLGKDSGLKLTPNPGVLSTD
ETGCATFGKFSVSGKRGEYNLSPRVVINRSTIEGIKLKLSVLPNTENPVSIKVKYDKDLN
TVMAGSTWPDFTISVLSEEGTPVTSSVHICMAVWSGKPNKDKSVPTSAEFHRTDKPSLGT
QCFQGITAATNAGDYCLCFCLCESKNSRNFTMISEIIKVKVYPGPPYKLYPDVDPGTPTV
SNSKISRTIVRNLTLILKDCHGNRTGQDLDSNVVVTIETCDETLKSIEVPRFEGNSVRLR
VPYINGSVRFQSLLLQEKSPGSDGGQYILHCEMESDQIDQKILPYRLKFLFYNDVEKQNR
MSVLVKQRDILKNAIESYESLFNLHETLLTELQKTLKDAEEKKILILKELRKRDVELSPE
ITLKNIDKLIESFAMDREEIFNQPRRHCMLKEYPDQSPEILGKIGHLAVILDDDVGRVLS
WHMMGDMDCLVTFTTKKAKDVHRTTGGTQQLLPLDSIYKKNLPDHTRPLPHLRAGVKHAV
RNVTGNPVFARDMLYYPKDPDSCKIVFGMLLGETLIMDDLDSANAYRNQVVKYTYCPTIL
TRTGERIRSNGKFGGSQNRAPSFERLKGAVFGAKLPMFYDERKRQIDVLGNFKTSMLEYN
SAVIELTNHETSLKTDEMLKKKLEHKEAVERLKEIELKIGLTKELSPRSSQRKTKASNVR
YDSETVSSAEKIIVLLIAVILQIFSSYKTAHEYCVQEGGSMGNLEILKKLRVELSNLQPF
VLQGVQYTDSIQQTESGL
>Harore.CG.MTP2014.S162.g04142.01.t
AGGACAGAAAATTTAGCATATGCATTTAATATTTCGCTATATTTTAGTGTTTTTACTTGA
AATTTATGAGAATCGAGGTACATGATGTCAGACGAGGATGCGTATGTAATCGTTTATGAT
CGTCGACAAACGAGTGAAGAAGGAAAAAAAATTACGATTGGAGGTGTTTTCTGTTACAAT
GAATTCATTCAAAAGATTAAACAGATGACATGTTTCGTTTGTTGGATAGTAATCTCAGTT
TGTGATCATGACCTATGTGACTGGGTTTTGATTTCAATTGTGTGTCCTTCACATGATATT
AACTTGGTTGAAGACGACGAATTTGTAGTTACCACCACGAATCGAAATCCTGTTGTCGAT
GACGATAGCTATGTGAAATTGATTGAATCCGGCGACACTCTCTATATTTTGGAATCGATC
GATCAACCATTACTTGCTCCCGTGTCGGAGAAAATAGAATTTCAACCTCATTACGACACT
TTGATCAAGAGCGGAATTTATGAATATTACGCCAGCGAAGGACATGTCAATCCATTACCA
TTCGCTTTCGCTGAACTTATTGACAATGCTTTGGCTGCAACTGTGAACAACAGAGGAAGC
AGAAACATTGATCTAACTTTGCAGTTTGATGACTCATCATCTGGACAAAGCACAATCTGT
GTCAGCGATAATGGAATGGGGATGTCGTCAAGGCAACTGAACAACTGGGCGATTTATCGC
TTGTCAAAATTTAATCGGAAAGAAACAAAGCAAAGACGAAACATTTTTGAAGATGACGTT
CTGTCATCCGGTACCTCCCACTCGATGGAACCAAAGTTGAAATATATGATGGATGCTCCG
AAATCCCTCAACAGCGACATCTCGTGGTTTGGTGTAGGAGGAAAGCAAGCGATCTTTTTC
ATTGGAAGTGCGACAAGGATTATTTCGAAACCTTTCAACTCCTGTGATGTTCATGAATTT
ACTTTATCAAAAGATGAATTCAGAAGGAAAGAAGCGAACAGAGAGACGATCTACAGCGGT
TATATAAGAAATAGAAAAGCTGGCGACTCCTCACACATCACAGGGAACGAAGAAGTCACG
AGACAACTGATCGCCACGGAAACGGACGAAGGTCGGGCGGATACCGGATTCACAAGCGTC
ATTATCACTGGAATTGACCCGAAGCACATTACGTTCATGAAACAAGGCTTCGGAGTTTGG
ACTCGTCAACTCTCGCATATTTATCATTACTATATACACGGACCTGAAGGAAATACTGCT
ATGTCCAGGAAAAGAAGAAATGTTGGAGCTCTTGATGTCAATTTGAATATCACGATGCAT
GAGCGTGGCAAACCGAGCGTGACCGTTGACCTTCGACAAATTAACGACGACCTTGAATCT
CAGTACATTAGAACGGCTTGTAATTCGTTTGAATTTAAAGCAAAAACTGACGGAGGAAGT
GGAATAGTTGAAGGAATAATTCGTTATCATCCGTTCATGTATGACAGAGAGACGTTTCCA
CTAGATCCAAATGCAGATGATGACTTCAGTGATTACGAAGCCCCGGACGAACCCCCAGCT
CGTGGTCGACGACCCATATTTGAATGTTATTGGAACGGCCGTCTCATCCCTTACACATTC
GTGGATGATTTTGATTGGTGCCGAGCTCCGAGGAAACGAGGAAATATTCCACTCGAATGT
TACTCGAGAGTTTCCGGATGTTTGTTCACCAACGATAGATTTCAAGTTTCGACGAACAAG
CTGACCTTCATCGACCTTGAAGCGAAACTTCGCGATCGCTCGACCGTGTTCACGAGGATG
ATTCTCGGACAAGAACAGAGAGCTCACATACAGCGACAATTCAATGATTGGTTGAGAGAA
TGTCATGAAAAATATGATAAACAGGTCAAATTTTTAAATTTTATCGAATCTTACCCTCGG
ACTGACATTTTCGGACGGAAACCCATAACTGTATATGGTGCCATCGAGTGGGACGGAAAA
ATATTCAAAGAAGGGCAGTTGGTCCGCACTCAACGTACGACTCCGGTTGTTCTAGGACGG
ATTAAAAGATTCTTGTTGCTGGGTGCTCACGAAGGAGATGTTTTCGCTGTCGGTGGTGAA
ATGGAAATGGTACAGGAACCAGAATCACTGTACGGAGAAATTCGTCGTTTTCCTTTGACG
AAACTCGATCGAGTCGTTTCATCTTCCGTTGTCCTCGATCTCATCCAGGAGGAAGAGCAA
AAACTTCCCGATAAATTAGTTCTGTCGTGGCCGGAAGGAAACGAAGTTAAGGACGGAGAT
TCGAGACAAATTGGAATGACAATTGGTAGGTGTACTTGGTTTTCAGGAGCGATGCGAATT
GAGATCCACAATCGTAGAAATGAATCTCTCCAGAAACTTCCGTCTAACGCTGGAGGAAGG
AAGCTGTTGATAGAACAACGATTCACTTACACTCCGTCAGTAAGAGGATCATCCCCGAGA
GAGATAGCCAGTCATGTGACATCACACGGAAGAACTTGGCCGTATTGGTTCAAAAAAATG
GACAATATTAAATCTCTTGGAACATATACAATTCATCTGCAAACAGTGTTGAATGAAAGT
GAAGCAAGTACTTACGCAGATGGACGAACTCTCCCGCATATGAAGATATCTTTCACGATA
CGTGAAGCCCCACCAAGCAGATTCCTCGTTGGAATTCTTGAATCCCCGCTACGAATTGGT
GAACCGTTCGATATTCCTCTCGAACTTCAGGATAAATATGGTCATCCGACGGAAGCTGCA
GTTTCTGATAAACCGATAATCGAATCTGAAGAACTTGATATTTCGTTCGACTCAGTCGAA
TGCAAGGGCAATACATTGGTGATGAAATCAGTTGTTGCAATCGGTTCAGTGATATCACAG
CATGGAAAGAGTTTCACAGTTACCGTTATCATCCCGGGTCTTGAAAGAGAATCGCAGACC
ATGAAGATAAGATTGTTGCCAGGGAAACCACATTCAATCAAGATTTTGTCGTTGACGAAG
AATGGGGACAAGCAGGAAGTGAATAAAGATGATGGTGAGGAAGACTCGGATCTCGAGCAC
TCTGGTTATCATTTTGAAATTGAGAATTTGTCAAATATATCACTCGATGTCGCTGTTATT
GATCTTGCAAGAAACGTGACATTGCAGTCGAATCTTCTCGTCCAAGCAAAGTTTCCACCA
TCATGTGGTGTATCTCCGATGAAATGTGACTGTTCCATGAGCGGGCAGGGAGTTCTCTCT
GGAAGAATCGCAATGAAAAAATTGAAGAAAGAAACGAAAATTATTAAAACGAAAATTGAA
ATTTTGGGATGCAAAAATACGGAATCGGTGCTCTGTTCCTTTGCTGTTCAACCTTCAACA
AAAGTGAGCGCGATTGAAATATTTTATGTCGATCCAAACAATGAAGAAGAAATCAATTTA
AAATCAGGTTCTGATATCCGATGGCCGGCCGGTGATATATTGACAAAATTAAGTTTTCGT
TTGTTGGACGAAGTAAAGCGAGAAGTTACGCTTAATAAAAATATCTGCTCTGGGCTCAAG
GTCAACTGGACAAATAGAGTATCGATCGAGCAATTGTGCGCATCGGAACTTCCGAACATT
CGAGTTCCAACGAATATGACGGACGTCAAATTCTGCCAAGTTGTTTTTGCTGGACAGAAA
AACCTGGAATTCTCATTCAGTATCAGGCCGATTGCTGGTGAACCTGCCGCTCTCAAATGC
AAAATCGTCGGTTCCAGAGTGACTCAGATAGGTGTCATCAGAGACAGCCCGGTCGCCGTG
ACGATACTGGATTGCTATGGCAACAAGCTGCCGATCAAGGAAGGACAATTCAACTCTCTC
CGCGTGACGGGCGAGGGTCTTGATGAGACCCTCGTTGTGAAAACGATTGAGAACAACCAA
TTCCTGTTGAACAACATTCAATTCAATGAAGGTCCGCTAGGCAGCAGAGAGCTATGTGTC
GTCTATGGCAACGATGACACAATAAAAGAATACGTCTTGCTCCAGCTAGTGGCAGGAACT
CCAGCAATGATTGAAGTTCAAGGATGGACAGATATAGAGAAGCCGCTCGCTATTCTGAGT
GGAACTCGGATCCCAGAACCCATTAAAGTCCAGCTGAAAGACGGATGGGGTAACCCCTCT
CCTCTTCTAGGGGTAAAGGTGCTACTCGGCAAAGATTCTGGCTTGAAACTTACCCCGAAT
CCCGGTGTCCTGTCCACTGATGAGACAGGATGTGCGACATTTGGAAAATTCTCTGTATCT
GGGAAGAGAGGCGAATACAACCTTTCACCGCGAGTTGTCATCAATCGATCAACGATCGAA
GGTATCAAGCTGAAATTGAGCGTTTTGCCGAACACAGAGAATCCCGTCTCGATAAAAGTG
AAATATGACAAAGATTTGAATACAGTGATGGCTGGATCTACATGGCCAGATTTCACGATC
TCAGTTTTATCTGAAGAAGGCACTCCGGTGACATCTAGTGTACATATTTGCATGGCAGTT
TGGTCTGGAAAACCGAACAAAGATAAATCAGTTCCTACATCGGCCGAATTCCACAGGACT
GACAAGCCGTCTCTAGGGACTCAATGTTTCCAAGGTATCACCGCGGCAACCAATGCTGGA
GACTACTGCCTCTGTTTCTGTTTGTGCGAATCGAAAAATTCAAGGAACTTCACGATGATC
AGTGAGATCATCAAGGTCAAAGTTTATCCAGGTCCTCCGTACAAATTGTATCCGGATGTA
GATCCCGGGACTCCGACGGTTTCAAACTCGAAGATTTCCAGAACGATCGTCCGAAATCTG
ACATTAATATTGAAAGATTGTCACGGCAACAGGACCGGTCAAGATCTGGATTCGAACGTT
GTCGTGACAATAGAAACGTGTGACGAGACACTGAAGTCGATCGAAGTTCCGAGGTTTGAA
GGAAATTCTGTTCGACTGAGAGTTCCGTACATAAACGGATCTGTCAGATTTCAGAGCCTC
TTGTTGCAAGAGAAATCTCCTGGAAGCGATGGAGGGCAATACATATTGCATTGCGAAATG
GAGTCTGATCAAATTGACCAAAAGATTTTGCCGTATCGACTCAAGTTTTTGTTCTACAAT
GATGTCGAGAAACAGAATCGAATGAGCGTTCTTGTCAAGCAACGTGACATATTGAAGAAT
GCGATCGAATCGTACGAGAGTTTGTTCAATCTCCATGAAACTTTGCTCACAGAATTACAG
AAGACATTAAAAGATGCAGAAGAGAAAAAAATACTGATTTTAAAAGAACTGCGGAAACGT
GACGTCGAACTTTCGCCTGAAATAACACTCAAAAATATTGACAAACTCATCGAAAGTTTT
GCGATGGATCGAGAGGAAATATTCAATCAACCGAGACGTCATTGCATGTTGAAAGAATAT
CCTGACCAGAGTCCAGAGATCTTAGGAAAGATAGGTCATCTTGCTGTTATACTTGATGAT
GATGTAGGAAGAGTTTTATCATGGCATATGATGGGTGATATGGATTGTCTCGTTACATTC
ACGACAAAAAAGGCCAAAGATGTACATCGAACCACCGGAGGCACTCAACAGCTGTTGCCT
CTCGACAGCATTTACAAAAAGAATTTGCCTGACCACACGAGGCCGTTACCACACTTACGT
GCAGGGGTCAAACATGCGGTCAGGAACGTCACCGGGAACCCAGTTTTCGCAAGAGATATG
CTGTATTACCCAAAAGACCCAGATAGTTGCAAAATAGTTTTCGGTATGCTGCTTGGGGAG
ACTCTGATTATGGATGATTTGGATTCAGCAAATGCATATAGAAATCAAGTCGTAAAATAC
ACATACTGCCCGACGATCCTGACACGCACCGGCGAACGTATCCGTAGTAACGGAAAATTT
GGCGGAAGTCAGAATCGGGCGCCGAGCTTCGAGAGATTGAAAGGGGCGGTGTTCGGAGCC
AAATTACCGATGTTTTACGACGAAAGGAAGCGTCAAATCGATGTCTTGGGGAATTTTAAG
ACAAGCATGTTGGAATACAATTCTGCTGTCATTGAACTGACTAATCACGAGACTTCGTTG
AAAACTGACGAAATGCTGAAGAAGAAACTTGAACACAAAGAGGCGGTAGAGAGACTGAAA
GAGATTGAGCTCAAAATAGGTCTTACTAAAGAACTATCACCGCGAAGTTCTCAACGAAAA
ACAAAAGCTTCAAATGTAAGATATGACAGCGAGACAGTCTCGAGCGCTGAAAAGATTATT
GTACTTCTAATCGCAGTAATCCTTCAAATTTTTAGCTCTTATAAGACAGCTCATGAATAC
TGCGTTCAGGAAGGGGGATCGATGGGGAACCTTGAAATCCTGAAAAAATTAAGAGTAGAA
CTCTCCAATTTACAACCTTTCGTATTGCAGGGTGTCCAATATACAGACAGTATTCAACAG
ACTGAAAGTGGCCTCTGACTTACGGACTTAATGTCTAATTTTAATTAATCAGTTCCTGAT
GTCTTGGCTCCCCCTACCTGTGTTGTTACAGTATTTGAAGTATCCGTATTCAACATTGTG
AAATTTTTAGGTTTTAACTCTGTGAAATCGCATCGTTTTCGATCACAATTTCTTTTTGAA
ATTTCGTTTTAATAATTATTTGTACTAGTTGCCACAAAAAATGTTTGGTTTCTCGCTGCT
ATTACGAGAAAGAAGGTTAGATTCAAAGCAATTCAATATTGCTTGCTTATGGTTTCTTAC
TGATCCATTCGCATGATCTAGAAT
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
SMHD1_HUMAN | 43.052 % | 1589 | 0 |