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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C10.596.v1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  4. Transcript 'KH2012:KH.C5.87.v1.A...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1687.g10865.01.t

Possible name(s)

HERC1; HERC2

Gene model

Harore.CG.MTP2014.S1687.g10865

Location

S1687 [429 / 3,304]

Sequences

Amino acid sequence

Length: 458

>Harore.CG.MTP2014.S1687.g10865.01.p
GESVDDCGGGYSESIAEMCDELESRLVPVLTLTPNGRDEAGANRDCFLLMPPPDNESWMN
TLYKMFQYLGILIGIAIRTGSPLSLNLAEPMWKLLSGQPQSIADITEVDKDFLPRLMFIR
DADKETLDSMQLPFTVQSVAAKEVKLSNKHTVISVGNRNSYIRLAMNYRLHEFDDVVRAV
QDGMSHVIPLPMLCLFTPQEMETMVCGSPDIPLPLLKSVASFKGVSPEEEISKWFWEIME
SLTNEERSLFLRFVWGRTRLPRTIADFRGRDFVIQVLDKYVPPDNYLPESYTCFFLLKLP
RYSCKAVMEQKLKYAIYFCKSIDTDDYARMALTEDDEDLEDLVASTSTNMERPAYSLFSD
LPSRSFMENGSTSSAIDLLRARVTRTSFNLLSRYSSNVSSYLTRQRRARPFLSHRTDLDP
ETISAIREALSDGGDSSTSGPDTISDSESTSNGCGDSD

Nucleotide sequence

Length: 1,575

>Harore.CG.MTP2014.S1687.g10865.01.t
GGTGAATCTGTGGATGACTGTGGCGGAGGATACAGTGAATCAATAGCAGAGATGTGCGAT
GAACTTGAAAGTAGATTGGTTCCAGTATTAACTCTAACTCCTAATGGCCGGGATGAAGCA
GGAGCTAATCGTGATTGCTTCTTATTAATGCCACCACCTGACAATGAATCGTGGATGAAC
ACCCTCTACAAAATGTTCCAATACTTAGGGATTTTAATCGGAATCGCCATCAGAACAGGG
AGCCCACTCAGTTTAAATCTTGCCGAACCAATGTGGAAACTCCTTTCGGGGCAGCCTCAA
AGCATCGCAGATATTACTGAAGTTGACAAGGATTTTCTCCCGCGGCTCATGTTCATTCGA
GATGCTGACAAAGAAACTTTGGACTCGATGCAACTGCCATTCACTGTCCAGTCTGTGGCA
GCAAAGGAAGTCAAATTGAGTAACAAGCACACTGTAATATCAGTAGGGAATCGCAACAGC
TATATACGACTTGCTATGAATTATAGGCTTCACGAATTCGATGACGTTGTCCGTGCTGTT
CAAGATGGTATGTCTCATGTCATTCCCCTTCCTATGCTTTGTCTGTTCACTCCTCAGGAA
ATGGAGACAATGGTGTGTGGAAGCCCAGACATTCCTCTTCCCCTTTTGAAGTCGGTAGCA
TCGTTCAAAGGAGTATCACCAGAGGAGGAAATCTCAAAATGGTTTTGGGAGATAATGGAA
TCACTCACTAATGAAGAGCGATCTCTCTTTTTGAGATTCGTGTGGGGTCGAACTCGACTT
CCAAGGACAATAGCAGACTTTCGAGGGAGAGATTTTGTTATACAGGTCTTGGACAAGTAC
GTACCACCGGATAATTATCTACCTGAATCGTACACTTGTTTTTTCCTTTTGAAATTACCG
AGATATAGTTGCAAGGCTGTGATGGAACAGAAACTGAAGTATGCTATTTACTTCTGCAAA
TCAATCGATACCGATGACTATGCCAGGATGGCATTGACGGAAGATGACGAAGATCTTGAG
GATTTGGTGGCAAGCACCAGCACTAACATGGAGCGACCAGCATACTCTCTGTTTTCTGAT
CTACCTTCACGATCATTCATGGAGAATGGATCAACCAGCTCGGCCATAGACCTGCTCCGG
GCACGAGTGACCCGTACCAGTTTTAATCTTTTGTCGCGATATTCTTCCAACGTATCTTCT
TATCTGACCCGACAAAGAAGAGCAAGGCCATTTTTGTCACACCGCACGGATCTCGATCCA
GAAACCATATCTGCTATCAGAGAAGCCCTTTCTGATGGAGGTGACAGCTCTACTAGTGGC
CCAGATACAATCTCTGATAGCGAATCAACTTCAAACGGCTGCGGAGATTCTGATTAATTA
CAGACATTTTAAACACGGAATTATTATTTCTGGTAGTTAGGTACTTTTGTTAGATCTGTG
CTTTTGTTAGTAAGTGTATTTATTGTACGTTCACCAATACATGGTAGTCATAGAAGTGTA
TATTGTATAGCATAGTGATAATCACTGTGGTATATTTGTCATTTGTTTCAATTAAAATTT
TAAGTAGCAGCTGAA

InterProScan

SUPERFAMILY
Hect_E3_ubiquitin_ligase (IPR035983) - T[1-319] 8.37E-76
SMART
HECT_dom (IPR000569) - T[1-331] 4.4E-29
ProSiteProfiles
HECT_dom (IPR000569) - T[1-316] 43.408
Pfam
HECT_dom (IPR000569) - T[57-319] 3.8E-55

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HERC2_HUMAN 68.935 % 504 4.97E-161
HERC1_HUMAN 41.543 % 256 3.66E-75
HECD3_HUMAN 33.721 % 168 3.4E-45