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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R23....'
  2. Transcript 'Cisavi.CG.ENS81.R417...'
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S16.g11358.01.t

Possible name(s)

NLRP11; NLRP3; NLRP7

Location

S16 [244,427 / 248,969]

Sequences

Amino acid sequence

Length: 1,017

>Harore.CG.MTP2014.S16.g11358.01.p
MGCGTSKGVQVLSSKDIDPEHTLNEDKEDFRRNEEQDVAVTVLTNKSSEKDASINIKYQD
QNVSQPVPPTHGEKAEKNRVPVINVSKADSPDGESVTSSNRYSLGDSSIVGVLVDSSANA
TVLDKLQSIQQSPASLNESNEQGNLVCNTFTEQSELYLQSNVNKVDELHSAGNTNESNQN
VLVPEPSGRPKLSDNDMFNNALRIACPATKEIDFISFAPKADSLTIEHSFYCLNKDQSPG
CLIRTVTAMENITELIMSGGQCGPVAFRALLFGLTQKNQIKTLNLSDNMADANCSETLGR
FIATSTSLEILDVSNNQLGKDALSRHTGAALRINSSLTELIMSNCGASDLHCLCESIRSS
ECSKLSTLVVSHNLLSDSYQFAIDLSLILESPECRLTQVDVTDTGIKSPGMNILAACLLN
NKSLTSLKVGRNEIKNVFKLAEMFIIVSQHEKLKKFSASKLGLEDIVENDPEYKWPERVE
RHSQLIAVDMADCGLNSAVMSKLALLLNGKLVNIEELDISNNNELSTEDIKLFDDMCAAD
DNQGNLKSLRLGMYEQGEKLPSIFSGRFKMMSALDVKKSKMNNTAIHQLARNLHGIETIN
LNAIKLSGSMGTLMKSFSKLSELHLSGCQLSDADCHPIVETIQESNLFITELDISVNRIT
ETFCQNLAIALLSFNSHPLKRINLADNNIAGLGLDSILSIYESNTHESNIEKLFLSSNSI
DGSAIARFFRHFRKILSFPLTHVDLKCQKDCCREEDIETIVDDIRILLMKVESFDRSLPS
WMTSRFTINLSGLGGENVPTFQTLDCSAIRTDFANVRRPTFSLNDVLEISVGFRIRNERG
HSLPEAMTFTSREWSEIVGKDAPAWLQVSSELKRAVYITHMPSTVTIQRLQALFEIEADC
IVEDVFLVKDPIVRKPTGSAWVLLSDEESPLRAVRWFCTGEALMYGSPFIISQVTAHISD
GKEGAAELAKSEIIRREQQQKLKNDEDRRLLEESEKVAAERAQYREAHPAYQNGRIS

Nucleotide sequence

Length: 4,325

>Harore.CG.MTP2014.S16.g11358.01.t
TGAGGATATTGTTATCACTTGGATAATTTAGTACAGCTGTATTAATTTAGTTACAAACAA
AACTATTTCAACTCGCTGTTAAAACACAGTTCTAGCAATGGCAAGTGGTATGATTGGTAG
GAGGATTATTTCAACCCCAAGATGGCTTGATCAAAACCTTATGAATAATGTGTTATCAAC
AACGAATGCGTTTACTGGTACAGGAATTTCAACGATTACGCTTTCTAAACAGCCGAAGAA
TACTCTCTGCCTACATCTAGCGGAAGAACTTGCAGATGCTTTTCGTCGCTGTGAAGCGAA
TTCTTCTATACGTGCAACAATATTGACGTCCAATTCGCGATATAACTATTTCAGCGATGG
CCTATGTCTGACGGATTTATATGACCAGCAATTTGAACATATTATCACTTACTGGAAAAG
CATCCGCGACCTGTTACTGACCATCTATGCTTACAAAAAACCTCTAGTAGCCGTAATAAA
TGGCCATGCGAACGGTGTTGGAAGTGAATTGACAATGGCAGCGGATTATCGCGTTATGAA
GGAGGGTGCTTCTATGGAGAGGAATGAATATGATTCTAGAGGTCAGCAGTGTTGTCAACG
CGTCGGGGATGAAATCTTTGGTAGTGTACGAAGCAAACTAATATCAGCTAATGATGCCTT
CCGCGCAGGTATTGTCGATGGAGTGAAAGCTGACGATGAAGTACTTGGAGCTGCTCTTTC
AGCTGCGACTCAAATGATGCAAAAACCCACAGAAGAGTTTATCTACGATAAAATTAAAAA
GAGAAGTTCTTTCATTGATGACCTTAGTGCTTCCAACACTGATGTCGCTCTGCTTACCAA
CATGACACTGGATCCTGATATACAAAGCAGTCTAAAATCTAAATTGGAGAGAAAACGACT
ATAACCTATCTGAGAAAATTGTAACCCTGAACCTTTAGAAAAGTTAGCATTAATGCATTT
ATGTTGGAGACCTTTCTAATGAAGGATTCGAAAGAACTTGCTAAATTATACCAAATAATT
ACCATGACCAGTAGCGTATCAATACGGGGGATTTACTCCGGCATATCTGCATGGGCGGTA
ATATGAACAATTTCACAGTGTATTTCTGAAAAAAAATCTTTAGTCAAATAAATTCTACGA
AATTCTTCCGTTTTGATAGGCGGGATGCGCTTCTCGATACTGTGCTCTTTCTGCTGCCAC
TTTCTCACTCTCTTCGAGCAAGCGTCGATCTTCATCATTTTTAAGTTTTTGTTGCTGCTC
CCTCCTAATGATTTCTGATTTGGCGAGCTCCGCAGCCCCCTCTTTGCCGTCGGAAATGTG
CGCGGTAACTTGACTTATGATAAACGGACTCCCATACATCAGCGCTTCGCCTGTGCAGAA
CCAACGCACCGCGCGTAAGGGTGACTCCTCGTCGCTCAGTAAAACCCAAGCTGAACCGGT
TGGTTTTCGAACGATCGGATCTTTAACCAAAAATACATCTTCTACAATACAATCCGCTTC
GATCTCAAAAAGAGCTTGCAGTCTCTGAATAGTTACAGTACTTGGCATATGCGTTATGTA
TACCGCCCTCTTCAATTCTGAAGAAACTTGCAACCAAGCCGGAGCGTCCTTACCCACGAT
TTCTGACCATTCGCGGGACGTAAACGTCATTGCTTCTGGTAAACTATGACCCCGTTCGTT
ACGTATTCTGAAACCTACAGAAATTTCCAAAACGTCATTCAAGGAAAACGTTGGTCTTCT
GACGTTAGCGAAGTCTGTGCGGATGGCACTGCAATCTAATGTCTGGAAGGTCGGCACATT
TTCTCCACCCAAACCGCTCAGATTGATTGTAAAGCGAGACGTCATCCAAGAAGGTAAACT
CCTATCAAAGGATTCGACTTTCATTAGAAGAATTCTAATGTCATCAACAATTGTTTCAAT
ATCTTCTTCCCTGCAGCAGTCTTTCTGACATTTTAGATCAACGTGTGTTAGGGGAAACGA
AAGAATTTTTCGAAAATGGCGAAAGAAACGAGCTATAGCTGAACCATCTATAGAGTTGGA
TGACAGGAAGAGCTTCTCTATATTACTCTCATGTGTGTTGGATTCATAGATGCTCAGAAT
GGAATCCAAGCCTAAACCTGCAATGTTATTGTCTGCTAAATTTATTCTTTTTAGTGGATG
ACTGTTGAATGACAGCAGTGCTATTGCTAAATTTTGACAAAACGTTTCTGTAATTCTGTT
GACAGAAATATCAAGTTCGGTTATAAACAAATTTGATTCCTGAATTGTTTCCACAATAGG
ATGACAATCTGCATCGCTTAGTTGACATCCAGACAAATGGAGCTCGCTCAGTTTGCTGAA
GGATTTCATGAGAGTTCCCATTGACCCACTTAGCTTGATTGCATTTAAATTTATTGTCTC
GATTCCATGCAAATTTCTAGCAAGCTGGTGAATGGCAGTGTTATTCATCTTGGATTTTTT
CACATCCAGGGCAGACATCATTTTGAACCTGCCTGAAAATATGGAGGGCAGTTTTTCTCC
CTGTTCATACATGCCTAATCGCAAGGACTTCAAGTTTCCTTGGTTATCATCTGCGGCACA
CATGTCATCAAACAGCTTTATATCTTCAGTACTTAGCTCATTATTATTTGAAATATCTAA
CTCTTCTATGTTCACTAATTTGCCATTTAATAGTAAAGCGAGTTTGGACATCACTGCAGA
ATTTAGGCCACAATCTGCCATGTCTACAGCAATTAACTGACTATGTCTCTCTACTCTCTC
TGGCCATTTGTATTCAGGATCATTTTCAACGATATCTTCTAGTCCCAGCTTACTTGCTGA
GAATTTTTTCAACTTCTCATGCTGTGAGACAATTATGAACATTTCGGCCAATTTGAAAAC
ATTTTTTATTTCATTCCTCCCAACTTTTAGAGAAGTTAGACTCTTGTTGTTTAAGAGACA
AGCTGCAAGAATGTTCATTCCAGGAGATTTAATGCCAGTATCAGTCACGTCAACTTGAGT
GAGACGACACTCGGGACTCTCAAGAATCAATGACAAGTCTATGGCAAACTGATAACTGTC
AGATAAGAGATTATGACTGACTACTAAAGTTGAAAGTTTACTGCACTCAGAACTTCTTAT
GGATTCACACAAGCAATGCAAATCTGAAGCCCCGCAATTACTCATAATAAGTTCTGTAAG
GGAAGAGTTTATCCGCAGTGCTGCACCGGTATGTCTAGACAGAGCGTCCTTACCAAGCTG
ATTGTTAGATACATCCAGGATTTCCAGAGACGTGCTGGTTGCAATGAATCTTCCAAGGGT
TTCGGAACAATTAGCGTCTGCCATGTTGTCAGAAAGGTTTAACGTCTTGATCTGATTTTT
CTGCGTCAGACCAAACAATAGTGCACGAAATGCTACCGGTCCACATTGCCCACCGCTCAT
AATTAATTCTGTAATGTTTTCCATGGCAGTGACAGTTCTAATAAGGCAACCCGGACTTTG
GTCCTTGTTCAAACAGTAGAAAGAGTGTTCTATAGTTAGAGAATCTGCTTTTGGAGCAAA
GGAAATGAAATCTATCTCTTTTGTGGCAGGGCAGGCGATTCGTAAAGCATTATTGAACAT
GTCGTTATCTGAAAGTTTCGGTCGTCCGCTTGGTTCAGGAACTAAGACATTTTGATTACT
TTCATTTGTGTTGCCTGCAGAATGCAGTTCATCCACTTTGTTTACATTACTTTGTAAGTA
TAATTCAGATTGCTCCGTGAAAGTATTGCACACAAGATTGCCCTGTTCATTGCTTTCATT
TAATGAAGCTGGTGATTGCTGTATACTTTGCAACTTGTCAAGAACGGTTGCATTGGCTGA
GGAGTCTACCAATACACCGACTATACTGGAATCACCCAGAGAGTACCGGTTACTAGATGT
TACTGACTCTCCATCAGGAGAATCTGCCTTCGATACATTAATGACTGGAACACGGTTCTT
TTCTGCCTTCTCTCCATGAGTAGGAGGGACCGGTTGCGATACATTTTGGTCTTGATATTT
TATATTTATACTTGCATCTTTCTCACTAGATTTGTTGGTCAGAACAGTTACCGCCACGTC
CTGCTCCTCATTCCGACGGAAGTCCTCCTTATCTTCATTTAGAGTATGCTCAGGGTCGAT
GTCTTTGGAACTTAAAACTTGGACACCTTTACTCGTTCCACATCCCATTTTCTGGTAGTT
AAATGACGTGGATTTAATTTCAAATTTATCTACTCCGGTGATTCAGTATGAATAATATGA
TCGGTAAATCAGTTCAGTCATAATTTCCGCAAGTTAATCGAATTACCAACAGCAAAACAA
TTTTG

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[191-469] 5.7E-27 - T[473-612] 6.1E-8 - T[613-792] 4.4E-18
Pfam
Leu-rich_rpt (IPR001611) - T[305-321] 0.85
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[863-936] 1.15E-5
ProSiteProfiles
RRM_dom (IPR000504) - T[874-971] 9.2

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value