Aniseed - Transcript Card

Transcript Model

Transcript Id

Harore.CG.MTP2014.S16.g15062.01.t

Possible name(s)

LYPLA1; LYPLA2; LYPLAL1

Gene model

Harore.CG.MTP2014.S16.g15062

Location

S16 [242,154 / 244,308]

Sequences

Amino acid sequence

Length: 390

>Harore.CG.MTP2014.S16.g15062.01.p
MVKRKILSKKITDYGTREANVSSPISPKRRYKLIPFFFILFLAAAWLVYTGTYLALFDKD
RIDNIRGIAQNKEDMATASRAFVLGSTSKTTGLVVFLHGLGDTGQGWSLSFDNQKEKHIR
YVFPNAPILPVTLNGGMKMPSWFDILALDMSGNEDEKGILKAKKDLIKFIEEEQKKHQIP
SNRVILGGFSMGGALALYSGLTHPDQLGGLILLSSWLPLRDHFLEEKYEATLTKQRCPIF
QGHGMADPMVKFEYGNQTHMMLNNARKQVGSAEVIFNSYEKLGHAQTQKVTFYLYAGNDR
CLQIHIRPSACSVAALRNCISFFPRPTTAVKNDVFHQIFFNVETSVNCELLAVNSPVYSF
IARHEQYFFDTLYRLLNLQQFSLRIIVLSL

Nucleotide sequence

Length: 1,427

>Harore.CG.MTP2014.S16.g15062.01.t
CACAACCGAGTAAAAACCAAATATGAGGCAATATATTTGTGGCAAGTACGTCACGTAACT
CGTTACCGCTATTATGCACGGAGAGTTTCCGACCATCCCTCTTACAAAACATATGCATTC
CTGCTTAATGCAACTTGAATTATATTATTGATGAGTGTTATATGGTAAAACGCAAAATTT
TGTCGAAGAAAATAACAGATTACGGAACTAGAGAGGCTAACGTCAGCAGTCCAATATCCC
CCAAGCGACGTTATAAGCTTATCCCATTTTTTTTCATTTTGTTCCTGGCTGCTGCTTGGC
TCGTTTATACTGGGACCTATTTGGCCCTGTTTGACAAAGATAGAATTGATAACATCAGAG
GTATCGCTCAAAATAAAGAAGATATGGCCACCGCGAGCAGAGCATTTGTGCTTGGTTCAA
CTAGCAAAACAACAGGCTTGGTAGTGTTTCTGCATGGTCTTGGAGACACTGGCCAAGGCT
GGTCGTTGTCATTTGATAACCAGAAGGAAAAACACATACGATATGTCTTTCCAAATGCGC
CAATACTGCCAGTGACTCTAAATGGAGGAATGAAAATGCCATCATGGTTTGATATCTTAG
CATTGGACATGTCTGGTAACGAAGATGAAAAAGGAATACTTAAGGCGAAGAAGGATTTGA
TAAAGTTCATAGAAGAGGAACAAAAAAAGCATCAGATTCCTAGCAACAGAGTGATACTTG
GAGGATTCTCTATGGGTGGTGCATTGGCATTGTATTCAGGATTGACGCATCCTGACCAGC
TGGGTGGCTTGATCTTGTTGAGTTCATGGCTGCCATTAAGAGATCATTTTCTAGAGGAAA
AATATGAGGCTACTCTCACAAAGCAAAGGTGTCCCATATTTCAAGGCCACGGCATGGCAG
ACCCAATGGTCAAGTTTGAGTATGGAAATCAGACACATATGATGTTGAATAATGCAAGGA
AACAGGTTGGATCAGCGGAAGTGATCTTTAACAGTTATGAAAAGCTCGGGCACGCTCAAA
CACAGAAAGTAACCTTTTATCTTTATGCAGGAAATGACCGATGTCTTCAAATTCATATCC
GACCATCTGCCTGCAGTGTAGCTGCTTTGAGGAATTGCATTTCATTCTTTCCTCGTCCTA
CGACCGCTGTCAAAAATGATGTATTTCATCAGATTTTTTTTAATGTTGAGACTTCAGTGA
ACTGTGAACTGCTAGCAGTTAATTCTCCTGTGTACTCTTTTATTGCACGACATGAACAAT
ACTTCTTTGACACCCTGTACAGATTACTGAACCTACAGCAGTTTTCATTAAGAATTATTG
TACTAAGTCTGTGATTGCTTTTGTACCCGTTTGTGATGCCAGCTAATATTCATATTAATC
GGAAATAAAGAATGTACTTTAAATGCAATAAATTCAATCAATTGCAA

InterProScan

Gene3D	AB_hydrolase (IPR029058) - T[71-294] 1.4E-60
Pfam	PLipase/COase/thioEstase (IPR003140) - T[81-288] 1.1E-56
SUPERFAMILY	AB_hydrolase (IPR029058) - T[87-285] 2.96E-43

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LYPL1_HUMAN	30.348 %	80.1	2.68E-17
LYPA1_HUMAN	43.056 %	176	2.05E-53
LYPA2_HUMAN	42.593 %	169	1.72E-50