- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S176.g04187.01.t
Possible name(s)
AL136295.5; RNF217; RNF31
Gene model
Location
S176 [132,102 / 147,027]
Amino acid sequence
Length: 1,453
>Harore.CG.MTP2014.S176.g04187.01.p
MVDVYPTPQSKRARDVLESRVRQGSAKGTNARYLVQDILQFNLPIAARYKHLDVIRILQD
NCSSSGPGLDALIHALSMLERYGKNLVRSERPPQWRVVRLSNSIFKKEVDILKGARDILR
LLGYTKKVEDGLAYVDECVVPDVPAVASVTADILLLRQELTMLTKGEHKQQRDFLSYIPY
EELSRIQGFYAQQQMQKSTPSETPAPEPQLPLESQSYPASTQQLFHPSSGGLLMPSSTVQ
NQMPVAAPVVQAAEVSEDELCHICGQIKSTVMCQKCDQQYCAPCDQIWHNNPRRKCHKRV
SIPLQNGINFGSEFNERSLLNNHQEYLPSNSSLPQQSSSGGYYNISGLAETRQPGGQSTQ
QLFHPSSGGLLMPSSTVQNQMPVAAPVVQAAEVSEDELCHICGQIKSTVMCQKCDQQYCA
PCDQIWHNNPRRKCHKRVSIPLQNGINFGSEFNERSLLNNHQEYLPSNSSLPQQSSSGGY
YNISGLAETRQPGEEGNQGSQPTVSGARLPPNPNSRSTSINDNENEWTRKVNRMATELMD
IADPDAQKSKLFSCLDDINKEKDKYIGGIQQLQSKGFEKPSLVAHFEERLGMLANLEEQL
KALVSYTEPPAETAQSVSSLAQNEDNPEESWSFKSVKSGPEFNSNLVASSMMNLGTGDFQ
PYAQKETVPLTTAVHLNGSTLKPNQPLQEADPPITIANLIDFSTPPEAVSVPSVTSTSIS
YTQDLVGLDLQKTKPSKAMSSLEDLDDITTAKKPLGEVENTSNFENFTSPFSSMHEAGSY
SCPTSPQSTSVSLRSPNNMPSTSLKRLNSNQQMGENRPTKVYRANPSSLSNVSEVNSEIT
NRLENMNIETRNAETIPMVVGQLSNFSTFFEDASPYLQNRIEEEPLSLSKSILQTLSHED
LQKRIRKEENLLQTTQFIDWIRMGQSERYLPEHVQIAVAELDNEGNLARILPNAWLRKKW
SGNLSTFRQYVKENCGFVITMTRAEECLLAENNNFPEALELIKEDINEQLHYNSGIYGKE
AAQNALIKCGGDEYRSTAILQKDEIKSFYLEVENGDLEDENEDDEEHLRNISQIKDEELR
THAHIAALDVSRCVYMDTYNALTQVLPLDMRNMVGDVIEAVLSYPGDVENAIRYLDNECM
ICLDKFPRSKITCLPTCGDNECMYCVSCLERHLSICITDKNIRDIICPCSGGFQFEIEIE
NNLKMICPFCQKGTCYSCKKQWEPQHEGISCEQFQLWKESNDPEFQAAGLARHLKENGID
CPDCNFRYALAKGGCMHFKCTQCSHEFCSGCKSPFKHGRACNIFPSCISKGLHAHHPRDC
LFYLRDSDPEMFQKLLDKYNVQYNSEGPNQGKCQVVEQKETSTGMKDDFCGRELKRGQAG
LCKLHYNEYLVNLVIVNGLDPAEVFSIDQLKPCLMREDKPIPKRLDNETDENYAKRLLKE
VKKLPLIKRQRRN
Nucleotide sequence
Length: 4,671
>Harore.CG.MTP2014.S176.g04187.01.t
TTTTATGTACAGAATGTATAACAAAGATCATGCTATGTAAATAGTATATTTCCAAGCATT
TCTGATAATAAAAAAACAAGTTAAACATGGTTGATGTTTATCCCACTCCCCAAAGTAAAC
GAGCAAGGGACGTACTCGAGTCGAGAGTAAGACAAGGCTCTGCTAAAGGTACTAATGCTC
GCTATCTGGTGCAAGATATACTTCAGTTTAACCTACCAATTGCTGCACGGTACAAGCACC
TTGATGTCATTCGCATACTGCAAGATAACTGTTCCTCGAGTGGCCCGGGCTTGGATGCAC
TGATACACGCTTTAAGCATGCTCGAACGCTACGGCAAAAATTTGGTACGCTCTGAAAGAC
CTCCGCAATGGCGAGTTGTCAGATTGTCCAACAGCATATTTAAAAAAGAAGTCGATATTT
TAAAGGGTGCTAGAGATATACTTAGACTTCTTGGCTACACAAAAAAAGTTGAAGATGGTC
TGGCCTACGTAGACGAATGCGTTGTTCCAGATGTCCCTGCCGTTGCTTCTGTTACGGCGG
ACATACTGCTCCTTCGCCAGGAATTAACGATGCTCACAAAAGGTGAACATAAACAGCAAA
GGGACTTCTTGTCCTACATTCCATATGAAGAACTGAGTCGTATTCAAGGGTTTTACGCAC
AACAACAAATGCAAAAAAGCACTCCCTCAGAAACTCCTGCACCGGAACCTCAATTGCCGT
TAGAAAGTCAAAGTTACCCTGCGAGCACACAACAGTTATTCCATCCATCAAGTGGGGGAT
TGTTGATGCCATCATCCACTGTCCAGAACCAAATGCCGGTAGCAGCACCTGTGGTTCAGG
CCGCTGAAGTATCAGAAGACGAACTATGTCACATATGTGGTCAAATCAAGTCGACCGTCA
TGTGCCAAAAATGCGATCAGCAGTACTGCGCGCCGTGTGACCAGATATGGCACAACAATC
CGCGTCGCAAGTGTCACAAGAGAGTGTCTATTCCTTTGCAAAATGGCATCAATTTCGGAA
GTGAATTTAACGAGAGGAGCTTGCTCAATAATCATCAGGAATATTTGCCCAGTAATAGTA
GCCTCCCGCAGCAATCCAGCTCTGGAGGATATTATAATATATCTGGTTTGGCAGAAACTC
GACAGCCGGGAGGTCAGAGCACACAACAGTTATTCCATCCATCAAGTGGGGGATTGTTGA
TGCCATCATCCACTGTCCAGAACCAAATGCCGGTAGCAGCACCTGTGGTTCAGGCCGCTG
AAGTATCAGAAGACGAACTATGTCACATATGTGGTCAAATCAAGTCGACCGTCATGTGCC
AAAAATGCGATCAGCAGTACTGCGCGCCGTGTGACCAGATATGGCACAACAATCCGCGTC
GCAAGTGTCACAAGAGAGTGTCTATTCCTTTGCAAAATGGCATCAATTTCGGAAGTGAAT
TTAACGAGAGGAGCTTGCTCAATAATCATCAGGAATATTTGCCCAGTAATAGTAGCCTCC
CGCAGCAATCCAGCTCTGGAGGATATTATAATATATCTGGTTTGGCAGAAACTCGACAGC
CGGGAGAAGAAGGCAACCAAGGTTCTCAACCCACTGTGTCTGGTGCCCGACTCCCACCAA
ATCCCAATAGCAGAAGCACTAGCATCAATGACAACGAGAACGAATGGACACGAAAGGTCA
ATCGAATGGCCACGGAGCTAATGGACATTGCTGATCCTGATGCTCAGAAATCTAAACTGT
TTTCGTGTCTTGACGATATTAACAAAGAAAAGGATAAATACATTGGTGGAATCCAACAGT
TGCAGAGCAAGGGCTTTGAGAAACCTTCCCTTGTTGCTCATTTTGAAGAAAGATTAGGAA
TGTTGGCAAACCTGGAGGAACAACTCAAAGCGTTGGTAAGCTATACTGAGCCGCCTGCAG
AAACAGCGCAGTCCGTGTCAAGCTTGGCTCAAAATGAGGACAATCCGGAGGAAAGTTGGT
CGTTTAAGTCTGTTAAATCTGGTCCCGAATTCAATTCTAATCTCGTAGCTTCCAGCATGA
TGAATTTAGGCACTGGCGACTTTCAACCCTATGCTCAAAAAGAGACCGTGCCATTGACAA
CAGCGGTGCACTTGAACGGATCTACTCTGAAACCTAACCAGCCCCTGCAAGAAGCAGATC
CTCCTATTACTATAGCCAACCTCATAGATTTTTCGACACCCCCTGAGGCTGTATCGGTGC
CGTCTGTTACTTCGACAAGTATTTCATACACGCAAGACCTAGTGGGCTTGGATTTGCAGA
AGACTAAACCTTCCAAGGCGATGTCTTCGTTGGAAGATCTTGACGACATCACAACTGCCA
AAAAGCCTCTGGGCGAAGTTGAAAATACTTCGAACTTCGAGAATTTCACAAGCCCATTCT
CTTCAATGCATGAGGCTGGCAGTTATTCCTGCCCCACATCACCCCAAAGTACCTCAGTAT
CTTTGAGGAGTCCTAACAACATGCCGTCTACGAGCTTAAAAAGATTGAATTCTAACCAGC
AAATGGGAGAAAATCGTCCAACTAAAGTTTATAGGGCCAATCCTTCTTCTCTCAGCAACG
TCAGCGAGGTTAATTCTGAAATAACTAACAGGCTTGAAAACATGAACATCGAGACAAGAA
ACGCCGAAACAATACCGATGGTTGTCGGTCAACTAAGTAACTTTTCGACGTTTTTCGAAG
ACGCTTCACCCTATCTTCAAAACAGAATCGAAGAGGAACCTTTGAGTCTCTCGAAAAGCA
TTTTGCAGACGCTTTCGCATGAAGATTTGCAGAAGCGGATCAGGAAGGAAGAGAACCTCC
TACAGACCACACAGTTTATTGATTGGATCAGAATGGGGCAAAGCGAAAGGTATTTACCTG
AACATGTACAAATCGCTGTGGCAGAGCTGGATAATGAAGGTAACCTCGCTAGAATTCTAC
CGAACGCTTGGCTACGGAAGAAATGGAGCGGAAACTTGTCAACTTTCAGACAATATGTAA
AGGAGAACTGCGGTTTTGTGATAACAATGACTCGTGCTGAAGAATGCCTGCTGGCAGAAA
ATAACAATTTCCCTGAAGCACTAGAACTGATTAAAGAAGATATAAATGAACAGTTACATT
ACAACTCTGGAATATACGGAAAGGAAGCTGCCCAAAATGCTTTGATTAAATGTGGTGGTG
ATGAGTATCGTTCTACCGCCATACTCCAGAAAGATGAAATTAAATCATTTTATCTTGAAG
TCGAGAATGGTGATCTTGAAGATGAAAACGAAGACGATGAAGAACATTTACGAAATATAT
CACAGATAAAAGATGAAGAACTCAGAACTCATGCTCACATAGCAGCCTTAGATGTGAGTC
GTTGCGTCTATATGGATACATACAACGCCTTAACGCAAGTGTTACCCCTCGACATGCGGA
ATATGGTTGGTGATGTGATCGAGGCCGTGCTGAGTTATCCCGGGGACGTGGAAAATGCAA
TAAGATATCTGGACAATGAATGCATGATTTGCTTAGATAAATTTCCTCGCAGTAAGATAA
CATGTTTACCCACATGTGGCGACAATGAATGCATGTACTGCGTGTCTTGCTTAGAGCGCC
ATCTCAGCATCTGTATCACTGATAAAAACATCCGAGATATCATTTGTCCGTGTAGTGGAG
GATTTCAGTTTGAAATTGAAATAGAAAATAATTTAAAGATGATATGTCCATTCTGCCAGA
AGGGCACGTGCTATTCGTGTAAAAAGCAATGGGAACCACAGCATGAAGGTATATCTTGCG
AACAATTCCAGCTATGGAAAGAAAGTAACGATCCAGAATTTCAAGCAGCTGGTTTGGCGA
GACATCTCAAAGAAAATGGAATAGATTGTCCAGACTGCAACTTCCGATATGCTCTTGCCA
AAGGTGGATGCATGCACTTCAAATGTACCCAGTGTTCTCATGAGTTTTGCAGCGGTTGCA
AGAGTCCATTCAAGCATGGCAGGGCATGCAACATATTTCCATCTTGCATCTCGAAAGGCC
TGCACGCTCACCATCCCCGGGATTGCTTGTTTTACTTGAGAGATAGCGATCCGGAAATGT
TTCAGAAGCTGCTTGACAAATACAATGTGCAATATAATTCAGAAGGACCGAATCAGGGAA
AATGTCAGGTGGTAGAACAAAAGGAAACATCAACAGGAATGAAAGATGACTTTTGTGGGA
GAGAACTGAAGAGAGGACAGGCAGGGTTGTGCAAGCTGCATTATAATGAATACTTGGTCA
ACCTTGTCATCGTCAATGGACTTGACCCAGCCGAAGTATTCTCCATTGACCAGCTAAAAC
CTTGCCTTATGAGAGAAGACAAACCAATACCTAAAAGGCTGGACAACGAAACGGACGAAA
ACTATGCCAAGCGTCTGCTGAAGGAAGTCAAAAAATTACCGCTAATAAAACGACAAAGAA
GAAACTAATTGCTATATATTTATTCCACTAATGGATTTACAAATTACTTACAATGTAATA
ACATCTTTTCAACGTTTAATTTTTTATTTTATTTTGTGCTGTATGATTTGCAAATAGACG
CCGGTGTGCGTGCTCCAGCTAAATCAATACTGTATCTCGTGAACAAGTTTTGGATGCATG
CTTCCTTACTGTATCTTTGTATTAAAAAGCATTAATAACACTCTGATCACC
| SUPERFAMILY |
PUB-like_dom_sf (IPR036339) - T[68-141] 1.28E-10 |
| Pfam |
PUB_domain (IPR018997) - T[71-139] 9.7E-12 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[256-302] 8.631 - T[394-440] 8.631 |
| SMART |
Znf_B-box (IPR000315) - T[256-302] 0.27 - T[394-440] 0.27 |
| PANTHER |
RNF31 (IPR026254) - T[798-1189] 4.8E-207 - T[1189-1450] 4.8E-207 |
| Pfam |
RNF31-UBA (IPR032065) - T[914-1048] 6.8E-6 |
| Pfam |
IBR_dom (IPR002867) - T[1256-1301] 1.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNF31_HUMAN | 32.637 % | 288 | 2.5E-80 |