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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S11...' > 
  2. Transcript 'Harore.CG.MTP2014.S4...' > 
  3. Transcript 'Haaura.CG.MTP2014.S3...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S176.g08767.01.t

Possible name(s)

RPAP2

Gene model

Harore.CG.MTP2014.S176.g08767

Location

S176 [151,476 / 154,875]

Sequences

Amino acid sequence

Length: 351

>Harore.CG.MTP2014.S176.g08767.01.p
MEKTNMDDENKLYTRKLDVQKEFERRKKAEKDAHIIVENLLQNNISKQMFLHSLKKITPD
HYADITEERSISGNCGYCLCNKNISQMPSQQFKISRNRVYDITERKKFCSDSCFSISSKI
SKQIPSSPIWLRDIAKMSDIKLPECISESERLPGEEVALRNIVSLDDVESHIDEGESDEL
ENITKEKLTNEIIEKSNIRKSRSQASKSVTRSTQSRYLEALSILNDWITKATLQYLQLLP
KECIDEQTKSQSSNSIGKENHIQSRFTSSTDTERESPPRQCEPQGNEKEFLDKVASYFKS
SLVIQERTVPKHNKNTEPAQKNKSELVLPTVDTANQEKVRQKIVQEHLNKM

Nucleotide sequence

Length: 1,923

>Harore.CG.MTP2014.S176.g08767.01.t
GGTTACTGTACTTTACCACCGTCTGTGGTGATTGTTTATTTTGATTTATATGTTACATTA
ATATAATACTCCAAGAAGAATTCCTGTTGATTATAATCTCAATCTTTGCAACATTTGAGA
TGGAAAAAACTAATATGGACGACGAAAATAAATTGTACACGAGAAAACTGGATGTTCAAA
AAGAATTTGAAAGGAGAAAGAAGGCGGAGAAAGATGCTCACATCATTGTAGAGAATCTGT
TACAAAACAACATTTCAAAACAAATGTTTTTACATTCACTGAAGAAAATTACACCAGACC
ACTATGCAGATATCACTGAAGAACGTTCAATTTCTGGAAATTGTGGATACTGCTTGTGTA
ACAAAAATATTTCCCAAATGCCATCACAGCAATTTAAAATCAGCCGCAACAGAGTGTATG
ATATTACAGAAAGGAAGAAGTTTTGTAGCGATTCCTGTTTTTCCATCTCCAGCAAAATAT
CTAAGCAAATTCCATCTTCACCAATATGGCTGAGGGATATTGCTAAGATGTCAGATATAA
AATTACCAGAATGTATTTCTGAATCTGAGCGACTGCCCGGTGAAGAAGTAGCTCTGAGGA
ATATTGTTTCTCTAGATGACGTTGAAAGCCATATCGATGAAGGCGAATCTGATGAACTGG
AAAACATTACAAAGGAAAAATTGACAAATGAGATTATTGAAAAATCCAATATCCGTAAAT
CTAGAAGTCAAGCCAGTAAATCAGTGACTAGATCGACACAATCGAGGTATCTTGAAGCCC
TCTCAATTTTGAACGACTGGATCACAAAGGCAACTCTGCAATATCTTCAATTATTGCCCA
AAGAATGCATTGATGAGCAGACTAAATCACAGAGTTCAAATAGCATTGGGAAAGAAAATC
ATATACAATCACGGTTTACCTCATCTACAGATACTGAAAGAGAGTCGCCGCCACGACAAT
GTGAACCACAAGGAAATGAAAAAGAATTTCTAGATAAGGTCGCTAGTTATTTCAAGAGCA
GTTTGGTTATACAAGAAAGAACGGTGCCAAAACACAACAAAAATACCGAGCCTGCACAAA
AGAATAAGTCTGAACTGGTGTTGCCTACAGTGGACACAGCTAACCAGGAAAAAGTCAGAC
AAAAAATTGTTCAAGAACATCTGAATAAAATGTGAGAACATATCAAGAAATATTGTGTAC
AGCAATGATTCCCAATGCTCCTCTAGAGCATCTTTAGGCTCCCATATGCCCTGGTCCTTT
CTCCCACCTCATTCTAAAAATTCTATATTAATAACGCCACTCTCAAAACTACCTGTTAGG
AATCAGAGCTGTGTATGAAGAATACATACAAAGAAAACAGCTAGTAAAAATGTATGGATT
TATGAATAGTTATTATACAAGATAAACTTGTGAAATGAAACAGTGAATATCTAGACTGGT
ACTAATGCTCAAAACCAGATTCTTATCTCACTTAGTATAATATAAACAATCAACAACAAG
GGAAATAATATGTAACAAGATCACATTAGTTTGGTTACCTGGACCAGTCTAGGCATTTCT
GCAAATGTAACCAATTCTTTTAAAGTTTCAAGAATGCCTGCAGCAGTCTAGTCAAGGAGA
GCTAAGGCTGAAGCACTTTACTATTGATTACCTGTAAAGCTATTATTCAAATAAATAAAT
AAATCACACGGATTATAGATCCCTCTCACTGCCATATTTTTCCCTGTTACTTTCTGAGTT
GTTAGTGTCGAATTTTGAATATTTCAGGTTTTTTTAATTGGCAAAGCATTTATAATTCAT
TTTAGCAACATCTTCCAAACAAATACACTTGGTGAAATTTTTATAGCAACCTGGCAAGAA
CGACGTATTTTCATCACTAGCTATGTTACAACTTATTCATCACTTTTGGGTGTTGCAGTC
TGA

InterProScan

Gene3D
Rtr1/RPAP2_sf (IPR038534) - T[4-187] 2.2E-28
ProSiteProfiles
Rtr1/RPAP2 (IPR007308) - T[52-133] 19.731
Pfam
Rtr1/RPAP2 (IPR007308) - T[57-124] 1.1E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPAP2_HUMAN 40.816 % 118 3.24E-29