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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...' > 
  2. Transcript 'Harore.CG.MTP2014.S3...' > 
  3. Transcript 'Moocul.CG.ELv1_2.S69...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S178.g08817.01.t

Possible name(s)

KCNB1; KCNB2; KCNF1

Gene model

Harore.CG.MTP2014.S178.g08817

Location

S178 [109,693 / 110,444]

Sequences

Amino acid sequence

Length: 178

>Harore.CG.MTP2014.S178.g08817.01.p
MSTKRSNIGNSAARKVMKLNVGGIRYSIKEDVLDRFPHSRLSKLRDCAMRHLCDEYDGED
NVYFFDRDPDSFRILQSCYKGAPIHMPRSMCPLRLTEEMAYWGIDNAQLDPCCQERRYTA
LKFVEELELEVEKKIKLKESAENKAVLSFKDVRTWKNFVDNVSKVGAFFAEPEMRTKY

Nucleotide sequence

Length: 537

>Harore.CG.MTP2014.S178.g08817.01.t
ATGTCTACAAAACGTTCAAATATTGGAAATTCTGCTGCTCGCAAAGTCATGAAACTCAAT
GTGGGAGGAATACGATATTCAATCAAGGAAGATGTTCTGGATCGTTTCCCGCACAGTCGT
TTGTCCAAGTTGAGGGATTGTGCCATGAGACATCTCTGTGACGAATACGACGGAGAAGAC
AATGTATATTTCTTTGATCGGGATCCTGATTCATTTCGTATTTTACAGTCGTGTTATAAA
GGAGCTCCGATACATATGCCGAGATCAATGTGCCCCCTTCGCTTGACTGAGGAAATGGCT
TATTGGGGAATAGACAACGCCCAGCTAGATCCCTGTTGCCAGGAAAGGCGGTACACTGCC
TTGAAATTCGTTGAAGAATTAGAACTGGAAGTTGAAAAGAAAATCAAATTGAAAGAAAGT
GCAGAAAACAAGGCGGTGTTGTCTTTTAAGGACGTTCGTACGTGGAAAAATTTCGTCGAT
AATGTTTCAAAGGTTGGTGCATTTTTCGCTGAACCAGAAATGAGGACGAAGTATTGA

InterProScan

PANTHER
VG_K_chnl (IPR028325) - T[13-148] 5.3E-28
SUPERFAMILY
SKP1/BTB/POZ_sf (IPR011333) - T[15-116] 2.15E-25
Pfam
T1-type_BTB (IPR003131) - T[18-112] 1.6E-22
PRINTS
K_chnl_volt-dep_Kv9 (IPR003971) - T[20-32] 2.3E-9 - T[35-51] 2.3E-9 - T[101-113] 2.3E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KCNB1_HUMAN 40.476 % 104 2.35E-26
KCNB2_HUMAN 40.496 % 100 4.12E-25
KCNG1_HUMAN 39.2 % 96.7 9.12E-24