- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S181.g10878.01.t
Possible name(s)
LRGUK; LRRC23; PPP1R7
Gene model
Location
S181 [34,976 / 37,226]
Amino acid sequence
Length: 345
>Harore.CG.MTP2014.S181.g10878.01.p
MSDGSEAEEESDGSGTLKGTEEKVPENPLVQEMMPECLSLLCKIGNGLAHAYVRLDIHDR
DINSIEILKNFIHVRYTDISGNHIQDISPMNYLTHLLTLKADKNNLTSAMLNPLPYLQTA
NFANNKITDTDGIEHPLLEQLNLNSNQITVISGLNPAVLTNLHTLELRGNKLETTAGLYL
PNLKNLYMAANVIKSIEGLERLEKLTLLHLRDNQITSLEGFSDQMRSLQYVNLRGNNITD
LKELHKIVSLPMLRALVLNGINSYFEYCILRFDNRQITFFPEDNPVQEQDSYRVEVLIIL
RHLERLDKDEYSSEERTEAEDVYEQKRQDELMNVPDEEESEQNDQ
Nucleotide sequence
Length: 1,343
>Harore.CG.MTP2014.S181.g10878.01.t
AAGTGGAATTGTTCACAAACCTTCGTACAGTTAATTCAAAATGTCAGACGGCTCAGAAGC
AGAAGAGGAATCAGATGGAAGTGGTACACTGAAGGGCACGGAAGAAAAAGTTCCTGAAAA
TCCACTTGTTCAAGAAATGATGCCAGAATGTCTGTCACTACTCTGCAAAATTGGAAATGG
ACTTGCTCATGCTTACGTCAGACTAGATATCCATGACAGGGATATCAATTCGATTGAGAT
TTTGAAGAACTTTATCCATGTACGATATACAGATATCTCAGGAAATCATATTCAAGATAT
TTCTCCAATGAATTATCTAACTCACCTCCTGACGTTAAAAGCTGATAAAAATAATCTGAC
GTCGGCTATGTTGAATCCCTTGCCTTACCTGCAGACAGCAAATTTTGCAAACAATAAAAT
CACTGATACAGATGGAATAGAACATCCGTTGCTAGAACAGCTGAACCTGAATTCCAATCA
AATCACTGTTATCTCTGGGTTAAATCCTGCTGTCTTGACCAATCTTCATACACTTGAGCT
GCGAGGCAACAAACTGGAAACAACAGCGGGACTTTATTTGCCAAACTTGAAGAATTTGTA
CATGGCTGCTAATGTGATAAAGTCTATTGAAGGACTGGAAAGACTTGAGAAACTAACATT
GTTACATCTGCGTGACAACCAGATTACTTCATTGGAGGGATTTTCAGATCAGATGAGGTC
ACTACAATATGTAAACCTGAGGGGTAATAATATCACTGATTTGAAGGAATTGCATAAAAT
TGTTTCTCTTCCGATGCTGCGAGCTCTGGTTTTGAATGGTATAAATTCTTATTTTGAATA
CTGTATTTTGAGATTTGATAACAGACAAATAACTTTTTTTCCTGAAGACAATCCCGTCCA
GGAGCAAGATAGTTATAGAGTTGAAGTACTGATTATCCTGAGACATTTGGAGAGACTAGA
TAAAGACGAATATTCTAGCGAAGAAAGAACAGAGGCAGAAGACGTTTATGAGCAAAAGCG
ACAGGATGAACTGATGAATGTTCCCGATGAAGAAGAATCGGAACAGAATGATCAGTAGTT
TCATTCTTTTATGTAACACGCACATATTGACGTGTTTAATTTTTTTACCAATTAAAATTG
GTCTCACGGCTACAACCGTAGTTTCGAAGACGTTACCTCATTTAAACGGCGTGTTGATTT
TTGTTCGCTCCATTGGTTTTGAACAAGTATTTTACTACGAGAGTGCAGCTCATGTGGACC
TTTATTCTATTATGCGGATACTTAGGAGTTGTGATTGCTTCTACTCAAGTTCATTTTGGC
AACAATAGAGGGTAGGATCGTAC
| Gene3D |
LRR_dom_sf (IPR032675) - T[43-177] 8.4E-21 - T[178-322] 1.1E-24 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[73-94] 6.526 - T[95-115] 4.616 - T[116-136] 5.232 - T[137-158] 7.735 - T[161-181] 5.902 - T[182-203] 8.228 - T[204-225] 8.02 - T[227-248] 7.543 |
| Pfam |
Leu-rich_rpt_4 (IPR025875) - T[204-244] 9.0E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRGUK_HUMAN | 31.949 % | 123 | 6.19E-31 |
| LRC23_HUMAN | 55.903 % | 313 | 9.44E-106 |