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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S10...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1838.g14877.01.t

Possible name(s)

CLEC4E; COLEC11; SFTPD

Gene model

Harore.CG.MTP2014.S1838.g14877

Location

S1838 [493 / 1,102]

Sequences

Amino acid sequence

Length: 202

>Harore.CG.MTP2014.S1838.g14877.01.p
MDWIRGASTSQGRPGKRGPVGEKGPKGDQGKQGLPGPKGNDNSRDIIVLQQQIQRLETTV
QQLKEETQRLRDGWKRATNGYYYWVSSKVNSWQAAKTLCEEKRARLATVGPRDPSLKEYL
QSLIPTGGWAWIGFNDIEIEGQWVWIDGITSDLASTFWGTGEPNNYGGDQDCAALHKTSD
GIDDWTCNSENLLSLCELDPLP

Nucleotide sequence

Length: 609

>Harore.CG.MTP2014.S1838.g14877.01.t
ATGGATTGGATACGAGGGGCCAGTACAAGTCAGGGTCGGCCTGGGAAACGAGGTCCAGTG
GGAGAAAAGGGTCCGAAAGGCGATCAAGGCAAGCAAGGATTACCAGGACCAAAAGGCAAT
GACAATTCAAGGGATATTATTGTGCTGCAACAACAAATACAGCGCCTAGAAACAACTGTA
CAGCAGCTGAAAGAGGAAACCCAACGGCTAAGGGACGGGTGGAAGAGAGCAACTAACGGC
TATTATTACTGGGTTAGTTCCAAAGTAAACAGCTGGCAGGCAGCGAAAACACTATGCGAG
GAAAAACGCGCCAGATTGGCAACGGTAGGACCAAGAGATCCATCTTTAAAAGAATATCTG
CAGAGTCTCATACCTACAGGCGGGTGGGCGTGGATTGGATTCAACGACATCGAAATCGAA
GGGCAATGGGTGTGGATTGATGGGATAACATCCGATTTAGCGAGTACCTTCTGGGGTACG
GGTGAACCGAACAACTACGGCGGCGACCAAGACTGTGCAGCTTTACATAAAACCTCTGAT
GGAATTGATGATTGGACTTGCAACTCGGAGAACCTATTATCTCTTTGTGAACTGGATCCT
TTGCCTTAA

InterProScan

SUPERFAMILY
CTDL_fold (IPR016187) - T[52-200] 1.4E-28
Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[66-200] 3.0E-26
SMART
C-type_lectin-like (IPR001304) - T[70-197] 1.8E-16
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[78-185] 16.602
Pfam
C-type_lectin-like (IPR001304) - T[90-197] 7.0E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value