- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S185.g00783.01.t
Possible name(s)
HMCN1; SPON1; SPON2
Gene model
Location
S185 [104,679 / 105,519]
Amino acid sequence
Length: 161
>Harore.CG.MTP2014.S185.g00783.01.p
MESNACTVPCGDLPIVVGEHVEAPFVPDDTSSQLVDPEIDCSDITWGDWSSCSATCGTST
QSRYRNVPEQCRRFITVRYQQQTCAVPKKCPIDCLSGEWSEWSICQSCGASKASRHLSKS
KRDSTSAVRGWQVRTRKRLRKAKFGGASCPPRKEKRKCRCE
Nucleotide sequence
Length: 486
>Harore.CG.MTP2014.S185.g00783.01.t
ATGGAGTCGAACGCGTGCACCGTTCCATGTGGAGATTTACCCATTGTTGTTGGCGAGCAC
GTAGAAGCACCGTTCGTACCAGATGATACATCGTCTCAGTTAGTTGATCCGGAGATAGAT
TGTAGTGATATCACTTGGGGAGATTGGTCAAGCTGTAGCGCTACTTGCGGTACGAGTACT
CAATCAAGATATCGGAATGTTCCAGAACAATGTAGAAGGTTTATAACAGTACGTTATCAG
CAACAGACATGCGCAGTTCCGAAAAAGTGCCCGATAGATTGTCTTTCTGGAGAATGGTCC
GAGTGGTCCATTTGTCAATCTTGCGGTGCATCGAAGGCATCTCGTCATCTTTCAAAGAGT
AAACGAGATTCTACGTCAGCAGTTCGCGGGTGGCAAGTGCGAACAAGGAAGCGGTTGAGG
AAAGCCAAATTTGGTGGTGCTAGTTGCCCACCACGTAAAGAGAAAAGGAAATGTCGATGC
GAGTGA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[26-91] 2.0E-7 - T[92-158] 3.6E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[39-84] 1.01E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[40-91] 9.931 - T[93-161] 8.669 |
| SMART |
TSP1_rpt (IPR000884) - T[43-91] 3.3E-5 - T[96-161] 9.4 |
| Pfam |
TSP1_rpt (IPR000884) - T[46-90] 1.5E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|