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TRANSCRIPT CARD

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  1. EST 'AHC0AAA223YD06_RM1' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1871.g13278.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Harore.CG.MTP2014.S1871.g13278

Location

S1871 [1,991 / 2,315]

Sequences

Amino acid sequence

Length: 107

>Harore.CG.MTP2014.S1871.g13278.01.p
MESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIK
IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF

Nucleotide sequence

Length: 324

>Harore.CG.MTP2014.S1871.g13278.01.t
ATGGAATCAGCTGGTATTCATGAAACCACGTACAATTCCATCATGAAATGCGATATTGAC
ATCCGTAAGGATCTTTACGCTAACAACGTTCTCTCTGGTGGAACCACCATGTATCCTGGT
ATTGCTGATCGTATGCAAAAAGAAATCACAGCCCTTGCTCCGAGTACCATGAAGATCAAA
ATCATTGCTCCTCCTGAACGTAAATATTCTGTCTGGATTGGAGGATCTATCCTTGCTTCC
CTCTCTACCTTTCAACAGATGTGGATTAGCAAACAAGAATACGATGAAGCTGGACCATCC
ATTGTTCATAGAAAGTGTTTCTAA

InterProScan

PANTHER
Actin (IPR004000) - T[1-106] 2.1E-73
Pfam
Actin (IPR004000) - T[3-107] 9.5E-47
ProSitePatterns
Actin_CS (IPR004001) - T[88-96] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 100 % 226 4.73E-75
ACTS_HUMAN 98.131 % 224 2.18E-74
ACTC_HUMAN 100 % 226 3.76E-75