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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Transcript 'KH2012:KH.S1552.1.v1...'
  3. Transcript 'KH2012:KH.C2.141.v2....'
  4. Transcript 'Moocul.CG.ELv1_2.S30...'
  5. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S18.g12315.01.t

Possible name(s)

GPR50; PTGER3; PTGIR

Location

S18 [443,051 / 450,818]

Sequences

Amino acid sequence

Length: 725

>Harore.CG.MTP2014.S18.g12315.01.p
MDSRIFNFATEKNKTDIIMIYDENIYNFSAVNSSGDKESHQCEWNSLNTGMTILLIVTLF
LNLLSSVVLFRVPLVTVRGRSNPVYLCIRFLNVCDVLQAFFLVVMQAFATSDCGWVGGEL
SCSIMGFMVLFFLLVSPLITILMAFDRVIALYQPFKYRSHLGLKMLKILLPSASLLVFLT
TILPIFGVGEYHVVKGRRFCLLDTITDNKVDRSYVIGVHSAFLLALLFMLSCTITFQLKL
VRMSFTKKHQDFASKSRKKISSKRTRTATITTMAVCGIFVVCYLPYVVRVLVEASRLIKS
PTWITWVTFGLAFLQPLLNPVVYVGTNVRYRQELQAMIKNMSATELDTSSESGATQVVSR
GPWSGFRRRLSSGGSRNSRRGSNRKRNFGSHTSVNGPLSPGQLGKQELKRGKHANQPKSP
LPLTPTDCNGKWKAPTGKKEEEIKCRADPSSSSGVRSFDSGEKILFSPSHLSSSSLAISG
STMKFIADGPKYGRGIRDLEPMRERSNTVSGDKSPGLTNEENIPLFETQHCASVPTLLDR
RRLPRNESADNASKMPGKLLDQHLQSDHCLLKRRSRSLDNLNISSSNEEVCQRDPNRQKE
ILSHSSVELKSEKVSLQSAQLLLNNLPGQVNSNKELPQVYIAGSNDSVHDQCFNDSQSLL
LLNDQETSPKRENFPYTNGIDISPIRSLALKRSEGRSSYKKALEISGPFFIERKPSKRDS
GVGEA

Nucleotide sequence

Length: 2,182

>Harore.CG.MTP2014.S18.g12315.01.t
ATGGATTCGAGAATCTTCAATTTTGCAACCGAAAAGAACAAAACTGACATTATTATGATA
TACGATGAGAATATTTATAATTTTTCGGCTGTCAATTCGAGTGGAGATAAAGAAAGTCAT
CAATGCGAATGGAACTCACTCAACACTGGAATGACCATTTTACTGATTGTAACTTTATTT
CTAAATCTTTTGTCGTCCGTCGTTCTATTCCGCGTTCCGTTAGTGACCGTACGCGGTCGG
AGCAATCCTGTATACCTGTGCATTCGTTTTCTGAATGTCTGCGACGTCTTACAGGCTTTC
TTTTTGGTCGTGATGCAAGCATTCGCAACATCCGACTGTGGCTGGGTCGGAGGAGAGCTT
TCCTGCTCCATCATGGGCTTCATGGTTCTATTCTTTTTGCTTGTGTCTCCGCTAATAACC
ATTCTTATGGCTTTCGACCGCGTTATTGCTTTGTATCAGCCTTTCAAATACAGAAGTCAT
CTTGGACTCAAGATGTTGAAAATTCTTCTTCCCTCTGCCAGCCTTCTAGTCTTTCTCACC
ACTATATTACCAATATTCGGAGTAGGAGAATATCATGTTGTAAAAGGTCGACGATTCTGC
CTCCTCGATACTATTACAGATAACAAAGTTGACCGGTCCTACGTGATCGGCGTCCATTCG
GCATTCCTACTCGCTCTTCTATTCATGCTTTCCTGCACGATCACCTTTCAACTGAAGTTA
GTACGGATGTCCTTCACGAAAAAGCACCAGGACTTTGCCTCGAAATCCCGCAAAAAAATC
TCCTCGAAAAGAACGCGGACCGCCACGATTACCACTATGGCTGTCTGTGGCATTTTTGTA
GTGTGCTATCTTCCTTACGTGGTACGAGTGCTCGTAGAGGCCTCGAGGTTAATAAAGTCT
CCTACGTGGATTACATGGGTAACCTTTGGCCTTGCCTTTTTGCAGCCTCTGTTGAATCCC
GTGGTGTACGTTGGTACCAATGTCCGGTATCGTCAAGAGTTACAGGCAATGATTAAAAAC
ATGAGCGCTACAGAATTGGATACATCGTCCGAAAGCGGCGCCACTCAGGTCGTGTCACGT
GGCCCTTGGTCAGGATTCAGACGGAGGTTGTCAAGTGGAGGGAGCCGTAATAGCAGACGA
GGAAGTAACAGAAAGCGGAATTTCGGCAGCCACACTTCAGTAAACGGTCCGTTATCGCCA
GGACAATTGGGCAAGCAAGAATTGAAGCGTGGGAAGCATGCTAACCAACCGAAATCTCCA
CTCCCTCTGACACCGACAGATTGTAACGGCAAATGGAAGGCTCCAACCGGCAAGAAGGAA
GAAGAGATAAAGTGTCGAGCTGACCCGTCTTCTAGCAGCGGAGTTCGATCTTTTGACAGC
GGCGAAAAGATTCTTTTTTCTCCGTCGCATCTTTCCAGTTCTTCTCTGGCCATCAGCGGT
TCCACAATGAAGTTTATTGCCGATGGACCCAAATACGGCCGGGGTATTAGAGACTTAGAA
CCGATGAGAGAAAGGAGTAATACTGTGTCCGGGGACAAATCTCCAGGTCTTACGAACGAA
GAAAACATTCCCCTCTTCGAGACTCAGCATTGTGCTAGCGTCCCAACGCTACTGGACAGA
AGAAGGCTTCCTCGTAATGAATCGGCTGACAACGCCTCTAAGATGCCAGGGAAGCTTCTG
GATCAACATTTGCAAAGTGATCATTGTCTATTGAAGAGAAGATCTCGTAGCTTGGATAAC
TTGAATATTTCATCAAGCAACGAAGAGGTTTGCCAACGAGACCCAAACAGACAAAAAGAA
ATATTGTCTCATTCATCGGTGGAATTGAAAAGCGAAAAAGTATCGCTGCAATCGGCCCAG
TTGCTCCTCAATAACCTTCCGGGTCAAGTAAATTCTAACAAGGAACTTCCACAAGTGTAT
ATAGCAGGCTCTAATGACAGCGTTCATGATCAATGTTTCAACGACAGTCAGTCTCTTTTA
CTACTTAACGACCAGGAAACTTCTCCAAAAAGGGAAAATTTTCCTTACACTAACGGGATT
GACATTTCCCCGATACGATCGCTTGCACTGAAGCGCAGCGAAGGACGATCTAGTTATAAA
AAAGCACTAGAGATCAGCGGGCCGTTTTTTATCGAAAGAAAACCGTCAAAACGAGATAGT
GGAGTAGGAGAGGCTTGAAGAG

InterProScan

PANTHER
Prostanoid_rcpt (IPR008365) - T[34-368] 8.5E-83
PRINTS
GPCR_Rhodpsn (IPR000276) - T[46-70] 4.1E-7 - T[129-151] 4.1E-7 - T[268-292] 4.1E-7 - T[305-331] 4.1E-7
ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[61-323] 25.788
Pfam
GPCR_Rhodpsn (IPR000276) - T[82-323] 2.8E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value