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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S18.g13578.01.t

Possible name(s)

RAC1; RAC2; RAC3

Gene model

Harore.CG.MTP2014.S18.g13578

Location

S18 [268,315 / 271,016]

Sequences

Amino acid sequence

Length: 247

>Harore.CG.MTP2014.S18.g13578.01.p
MMEGGKLRQPIFKGIEFFKCVFQTFEIDNTTKSIRAEHPTYIVDDSTARRNLSSSMQAIK
CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPVNLGLWDTAGQEDYD
RLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVSHHCPNTPIILVGTKLDLRDDQDT
IARLKEKRLAPVSYPQGLHIAKEIRAVKYLECSALTQKGLKIVFDEAIRAVLCPPAKDKK
KKNCDIL

Nucleotide sequence

Length: 1,296

>Harore.CG.MTP2014.S18.g13578.01.t
AATTGCCTACCGACTGACATCGGTGATATGAGCGAAGTCAAAATACATAGACACGCCCAT
CACTGATAAATTGAAAATTGCAGTAATAATTCGTATTTATATATGATTCAGTTAGATCAA
AAAGGAAATTTTAAATAGTAGCATCTTGATTTGCTGGTTTTATATTGATGAATTGAATTT
GTTACGGTTACCGTTACGTATAGACAACTCGAAACGACGACATCTTATACAGGGCCACAC
TCAAATGATGGAAGGCGGTAAACTTCGTCAACCTATCTTTAAAGGGATAGAATTTTTCAA
GTGTGTGTTTCAAACTTTTGAAATTGATAATACAACGAAGTCCATACGCGCTGAGCACCC
GACTTATATCGTAGACGATTCCACTGCCAGACGCAATCTCTCTAGCAGCATGCAGGCCAT
AAAATGCGTGGTAGTCGGGGATGGTGCGGTTGGTAAAACATGCTTGCTTATCAGCTACAC
AACAAACGCTTTTCCGGGGGAATACATACCAACAGTTTTTGACAACTACTCAGCCAATGT
CATGGTCGATGGCCGACCAGTTAATCTGGGGCTGTGGGATACGGCAGGACAGGAAGATTA
TGACAGACTTCGGCCACTCTCGTATCCGCAAACAGATGTGTTCCTCATATGCTTTTCGCT
GGTATCTCCCGCGTCTTACGAGAACGTGCGTGCAAAGTGGTTCCCTGAAGTGTCCCATCA
TTGTCCCAACACGCCGATTATCTTGGTAGGTACTAAGCTCGACTTACGTGACGACCAGGA
CACCATAGCGCGTCTGAAAGAAAAAAGGCTTGCTCCCGTCTCCTATCCACAAGGGTTGCA
CATAGCTAAGGAAATAAGAGCGGTAAAGTACCTCGAGTGCTCAGCGCTGACGCAAAAGGG
CCTGAAAATCGTATTTGACGAAGCTATCCGTGCTGTCTTATGTCCGCCGGCAAAAGACAA
AAAGAAGAAGAATTGTGATATTCTTTAAGATATTCCACTTTGTTTTTGATAGTTCATCAG
TGGTCTCGCAGTGTTAAAACTAGTCGGTTATAAAATTAAGCTAAGCGTTCAGGCTCAGCC
TTTTTCAACTTCTCTCTATGATTCATTTCGTTATTAAATAATAAATCACATTCTCGAATG
CGATCGCTAGAAAAGTTTCATGCCATTCGAATGTAGTTCATACCGAACTTAGGACATTTT
ATGATTTTTGATTGCTGTAGATTAGCGAGCTAACTCTAGATGCAAATCTTAATACCGGTT
ATGTTTCCCTAATTTGTACCCCTCTGTGGTTACCAT

InterProScan

ProSiteProfiles
Small_GTPase_Rho (IPR003578) - T[52-231] 28.428
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[56-190] 5.2E-37
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[59-231] 4.5E-56
Pfam
Small_GTPase (IPR001806) - T[60-232] 2.3E-53

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAC1_HUMAN 87.5 % 358 2.12E-127
RAC2_HUMAN 86.458 % 355 3.99E-126
RAC3_HUMAN 84.896 % 341 1.11E-120