Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 512

>Harore.CG.MTP2014.S192.g06749.01.p
MDERQEIQAAIKQQGEVVRKLKQKKGDQQEIEQEVAKLLALKAKLGGNDEKSKFVLKAPK
GTRDFSPKQMAIREKVFGIIVSCFKRHGAETIDTPVFELKETLTNKYGEDSKLIYDLKDQ
GGEMLSLRYDLTVPFARYLAMNKVESIKRYQIAKVYRRDQPAMTKGRYREFYQCDFDIAG
PHDSMIPDAECLRIMYEILSDLELGDFSIKVNDRRILDGVFESCGCPADKFRPACSAVDK
LDKLPWEDVRKEMLEKGLDEIVADRIGTFVSLSGGIDLVEQLLNDPLLSKSKSAVAGLQD
MRLLLEYIDLFQITDKTSFDLSLARGLDYYTGAIYEAVLNNCPIKVDKERQKGETVGVGS
VAGGGRYDELVGSFHPKGKTTPCVGLSIGIERIFAILEARAEGTKIRTTETDVFVASPQK
GMLSERMKIVAEFWSAKLKAEMSHKKNPKLLSQLQYCEDNGIPIAVMIGSGELEEGNVKI
RNVATREETLVPRSQMVDKVKKVLAQQTGNLC

Nucleotide sequence

Length: 2,529

>Harore.CG.MTP2014.S192.g06749.01.t
ATTAACTCATGCGTCGCGCAACAACACATGTGGATTTCATCATTTTGCTGTGACTCACAG
ATGCTGTCAATATCTTGCTGCTTATCAGATTGTTAGCTCAAGTAGAATGAACTGAATTTG
CTATGGATGAAAGACAAGAAATTCAGGCCGCCATAAAGCAACAAGGAGAAGTCGTACGTA
AGTTGAAGCAAAAGAAAGGAGACCAACAAGAGATTGAACAGGAGGTTGCCAAGTTGCTAG
CACTTAAGGCTAAGTTAGGAGGCAATGATGAAAAGTCAAAGTTTGTTCTTAAAGCACCAA
AGGGCACAAGAGACTTCAGCCCTAAGCAAATGGCAATAAGAGAGAAAGTGTTTGGCATTA
TTGTCTCCTGTTTCAAAAGACATGGTGCTGAAACAATAGATACTCCAGTTTTTGAACTTA
AGGAAACTTTAACTAACAAGTATGGAGAAGATAGTAAACTGATTTATGATTTGAAAGATC
AAGGTGGGGAGATGCTGTCACTAAGATATGACCTTACAGTTCCTTTTGCGCGATATTTAG
CCATGAACAAAGTTGAAAGTATAAAGCGTTATCAGATTGCTAAAGTTTACAGACGAGATC
AGCCGGCAATGACGAAAGGGAGATATAGAGAATTTTATCAGTGTGACTTCGACATAGCCG
GACCTCATGACTCGATGATTCCGGATGCAGAATGCTTGCGCATTATGTATGAAATTTTGT
CTGACCTTGAACTTGGAGACTTCAGTATTAAGGTAAACGATCGCCGGATACTTGATGGCG
TTTTTGAAAGTTGTGGATGTCCTGCAGATAAATTTAGACCTGCCTGTTCTGCTGTCGATA
AACTGGATAAACTTCCTTGGGAAGATGTGCGTAAAGAGATGTTGGAAAAAGGTCTAGATG
AGATAGTTGCAGATAGAATAGGAACATTTGTAAGCTTGTCAGGAGGAATCGATCTGGTTG
AACAACTTCTAAATGATCCTTTGCTTAGCAAGAGCAAATCTGCAGTTGCTGGACTGCAAG
ATATGAGATTACTATTAGAATATATTGATCTATTTCAAATCACAGACAAAACTTCATTCG
ACCTGAGTCTTGCTCGTGGACTTGATTATTACACCGGTGCAATATATGAGGCTGTGTTGA
ATAACTGTCCAATCAAAGTAGATAAGGAACGCCAGAAAGGAGAAACAGTTGGAGTCGGTT
CAGTGGCTGGAGGTGGGAGGTATGATGAACTTGTGGGAAGTTTTCATCCAAAAGGAAAAA
CGACTCCGTGTGTTGGTTTGAGTATTGGAATAGAGCGAATCTTTGCTATACTTGAAGCCA
GAGCAGAAGGAACCAAAATCCGTACAACTGAAACAGATGTCTTTGTTGCTTCTCCCCAGA
AAGGAATGTTATCTGAACGAATGAAAATCGTTGCGGAATTTTGGTCTGCAAAATTAAAAG
CTGAAATGTCTCATAAAAAGAACCCGAAACTGCTCAGTCAATTGCAATATTGTGAGGATA
ATGGGATACCTATCGCTGTTATGATAGGAAGTGGGGAATTGGAGGAAGGCAATGTAAAAA
TTAGAAATGTTGCCACCAGAGAAGAAACTTTGGTACCACGTTCACAAATGGTTGATAAGG
TTAAAAAAGTACTAGCTCAACAAACTGGTAATTTATGTTAGGTAAATTATAGTTTTTGTA
TTTACAAAGTATACTCAAACATGTTCGGTGTAAAAGTGGTTCAGTATGCCTCCTAGTCTT
GTGAGTAACTAGTAATGAGCATTAGGATTGTTGTAGTGCTATGCTCTGTGGCTGTACTGA
ACCATATAAATAGGGGGCTTGCATTCGTTTTGTTTTTAATTATATTATTCCACAACAATA
AAAAAATAAAAATTATGCCTACTGTCTTTGTGAATGGTAATGAAAATGTGCACCTACAAC
TAAAGGTTGAAAATTATTGTGAAAAAACCACGACAAGACTATTCAAGTTTTAGCAAGGGT
AATTTTCAATGAAAATTGTAATTATTTGTCCAGTGAGGCTTAAAGGTTAAGCAAGTTTGT
AAAGAAAAGGTTGTGCAAATCAAGGTAAAATCATATACAGGGGTTATAATGGTTGTATCC
AGTGTCTCGAAGTAAGAAAAAATTTGGAATCTCTTCGAGATTTTCAAATGTCTTATTTGA
TTCCAGCCTCCTATAGCAGGTGTTTCTGTATAATTTGCATTCCACTAAAAACTGAACTAC
CAGGTGTATACACCAGCAGGAAGTTGGTCTGGATAACACCTACCAGACGTGTAAGGTTAC
GTAGTTTTCAATTATTAGCACCTCTGACACAGTATTATCCAATTGCCTGGATAGATACAT
TGTGAAATTACATATACAGTAATCCAAAATAGATATTTATAATTTGACCCAATTCTTCTC
GTGAGAAGGTGCAAGCTTCGTTGTTTATGTTTTTCTAGTCATGATTACTGCAAACATGAA
AAAAATCAGTTACTATAGGGCAGTGTTGTTCAAACTGTGTGTCGCGTGCAGTGCGTAGGT
GTGTCGCGG

InterProScan

PANTHER	HisRS/HisZ (IPR004516) - T[1-507] 1.1E-236
PIRSF	HisRS/HisZ (IPR004516) - T[2-57] 200.0 - T[52-504] 3.2E-121
ProSiteProfiles	WHEP-TRS_dom (IPR000738) - T[3-59] 12.758
SMART	WHEP-TRS_dom (IPR000738) - T[7-60] 1.8E-10
Pfam	WHEP-TRS_dom (IPR000738) - T[7-46] 4.1E-11
SUPERFAMILY	S15_NS1_RNA-bd (IPR009068) - T[8-59] 6.28E-11
ProSiteProfiles	aa-tRNA-synth_II (IPR006195) - T[37-418] 13.42
TIGRFAM	His-tRNA-ligase (IPR015807) - T[57-492] 4.1E-93
Gene3D	Anticodon-bd_dom_sf (IPR036621) - T[408-507] 3.6E-30
CDD	HisRS_anticodon (IPR033656) - T[410-501] 6.39075E-25
Pfam	Anticodon-bd (IPR004154) - T[413-502] 2.7E-12