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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'Boleac.CG.SB_v3.S446...'
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S199.g02614.01.t

Possible name(s)

EIF2S1

Location

S199 [87,038 / 92,007]

Sequences

Amino acid sequence

Length: 320

>Harore.CG.MTP2014.S199.g02614.01.p
INYRYTNMSISCRFYEERFPEIEDVVMVNVRSIADVGAYVKLLEYNNIEGMILLSELSRR
RIRSINKLIRVGRDECVVVIRVDKEKGYIDLSKRRVSSEEAKKCENKYSKAKCVYSILRH
TAELLEIQQDKEFEDLFSRTAWVLDAKYKRSTDKCPPSYNLFKRAIEEPSVLDELDITDK
EREVLMKNIRRRLTPQAMKIRADIEVSCYTYEGVDAVKKALKRGIACSTEEHKIKINLIA
PPVYVSTTQSLDRQVGLATLTRCIEEIESTIKESGGHFKIKMEPKVVTDLDDLELQKEME
KLALMNEEVDGDDDADEFED

Nucleotide sequence

Length: 1,325

>Harore.CG.MTP2014.S199.g02614.01.t
AGATAAATTACAGATATACCAATATGTCTATCAGCTGTAGATTTTATGAAGAGCGATTTC
CAGAGATAGAGGATGTTGTGATGGTGAATGTCAGATCTATAGCAGACGTAGGAGCTTACG
TGAAACTGTTGGAATATAATAACATCGAAGGAATGATTCTGTTGAGTGAGCTTTCAAGGC
GTCGTATCAGATCTATAAACAAACTCATTAGAGTAGGCCGCGACGAATGTGTTGTTGTTA
TTCGAGTTGACAAAGAAAAAGGCTACATTGATTTATCCAAACGAAGAGTTTCATCAGAAG
AGGCCAAGAAATGTGAAAATAAATATTCAAAAGCTAAATGTGTGTACAGTATTCTACGCC
ATACTGCAGAGCTTCTTGAGATTCAGCAAGACAAAGAGTTTGAGGATTTGTTTTCACGTA
CGGCCTGGGTGCTAGATGCAAAGTATAAACGTTCAACAGACAAGTGTCCTCCTTCTTATA
ACCTCTTCAAGCGTGCAATCGAAGAACCAAGTGTCCTGGATGAACTGGATATTACAGATA
AAGAAAGAGAGGTTCTAATGAAGAACATACGAAGACGGCTAACGCCCCAGGCAATGAAAA
TTAGGGCAGATATCGAAGTTTCATGCTATACTTACGAGGGCGTTGATGCGGTCAAAAAAG
CATTGAAACGAGGCATTGCTTGTTCAACAGAGGAGCATAAAATAAAGATCAATCTCATAG
CTCCACCAGTTTATGTTTCAACAACCCAATCATTGGATCGTCAGGTTGGCCTGGCAACTT
TGACCCGCTGCATTGAGGAAATAGAAAGCACAATCAAAGAATCAGGAGGACATTTCAAGA
TAAAAATGGAGCCAAAAGTTGTCACAGATTTGGACGATCTAGAACTACAGAAAGAAATGG
AAAAGCTGGCTTTGATGAATGAGGAAGTAGATGGAGATGATGATGCTGATGAGTTTGAGG
ACTGAGGTGTTATCGATTGTGGTGCATGTAGGCAATGTATGTTTAAAACCAGATGACTTC
TGCTTGTCATTGTAGCCACATATTCCAAGGATATATTAAAAAATTTGGAAGATTATCAGA
ATTATGCATATCTTGAGTTATTGTGACATTGGCAATGTCAGAACAGCGGTGCATATTTGT
TTGGGGAATAAACACGGAATATCTGCAGAAAACGAATGTTGCTATGTTTCAAAAGCAGAG
TATGTGAAGAAGTATGATTCTTTATTCTCTCTTGGAAAAAAGTAGATTCTGTCTTAGTTT
TCAGTGTACGATCAAAAGAACACCTTATACACCTACACGGATATCAATGACGAAAATGGA
AAATG

InterProScan

PANTHER
TIF_2_asu (IPR011488) - T[9-320] 7.3E-133
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[17-98] 2.93E-17
Pfam
S1_domain (IPR003029) - T[20-94] 6.8E-15
SMART
S1_dom (IPR022967) - T[21-94] 4.0E-12
ProSiteProfiles
S1_domain (IPR003029) - T[23-94] 16.961
SUPERFAMILY
TIF2_asu_middle_sf (IPR024054) - T[96-192] 6.67E-25
Gene3D
TIF2_asu_middle_sf (IPR024054) - T[97-191] 5.6E-30
Pfam
TIF_2_asu (IPR011488) - T[138-252] 1.9E-33
SUPERFAMILY
TIF2_asu_C (IPR024055) - T[196-312] 2.09E-36
Gene3D
TIF2_asu_C (IPR024055) - T[197-319] 1.9E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
IF2A_HUMAN 66.881 % 425 9.39E-151