- Clone 'cicl047k07' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S19.g02448.01.t
Possible name(s)
CWC22; NOM1
Gene model
Location
S19 [194,146 / 198,330]
Amino acid sequence
Length: 966
>Harore.CG.MTP2014.S19.g02448.01.p
MKMSKSKHDLEDGEIISEKRGKNDEPPVKKTKTEQKTSFTGKTGGAYIPPARLRMMQKMI
TDKSSAEYQRISWEALKKSINGLINKVNVSNISSIVRELFQENIVRGRGILAQSILQAQN
ASPTFTQVYAALVSIINTRFPQNGELILRRLAIQFRRSYKRNRKDVCLHSSQFIAHLINQ
QVAHEIIGLQILTLLLETPSDDSVEVAIGFLKECGQKLMDVSPRGLAAVMQRLRTVLHEQ
ELDKRVQYMIEVMFAIRKDGFKEHPAVTEELDLVEESDQFTHMLQLEDDGGGKGTENELN
VFHVDEDFVQNEENYKQIKKDILDESSRGSSGSSGDSSSDSSEDEAPEDAKTQEIEDLTE
TNLVALRRTIYLAIQSSLDFEECAHKLLKMEFDVKDYKEICAMIIDCCSQQRTYEKFYGL
LGARFCILKKEFMENFEILFAEQYGVIHRLETNKLRNVAKLFAHFLHSDALPWTVLSNIR
LSEDSTTSSSRIFIKILFQELVEYLGLQKLNLRLKDETLAPFFEGLFPRDNPKDTRFAIN
FFTSIGLGGVTDELREHLKDAARAMTEKLQAEQLASLNMDSTSSDSDDESSSDEKSKKNK
RKKSSKTKKKTSKKSKSKKKKKSKSSSKSEDSEELKKQREWESESDSSSPERKMKSSVVI
KSQTGSSKNEKPDDESKGKAKENGDKKKSKSISKKKKRRTPSSSSSDASSSSSSVDQAQK
KKSGTLKERLLKISNTTFSKESCTDRKRAEILVVPKVNKKSSVRAKRNKRSSSSSESSSE
SSESDSDSSDEAETARKSEKNKTLKQRKRDSSNEKRDKDKRNGARHRKNSSDGALIYEKD
KTRKNEGRSQRMVNEDSDRYESKRRESHAVRGLSVDSQVESRPSVKDIKFKYGLQLKFKR
LTLNSVLLNTNLSLCKAGNNNIKEVVYDKNTKQCCSDDGNLESLHISSKQRTKQYNKRPR
QVTHGI
Nucleotide sequence
Length: 2,901
>Harore.CG.MTP2014.S19.g02448.01.t
ATGAAAATGAGTAAATCAAAACACGATTTGGAGGATGGAGAAATCATCAGTGAGAAAAGA
GGCAAAAATGATGAGCCGCCTGTCAAAAAAACCAAGACCGAACAGAAAACAAGCTTCACA
GGAAAAACTGGCGGTGCTTATATCCCTCCAGCAAGGTTACGGATGATGCAGAAAATGATC
ACGGATAAGAGCAGCGCTGAATACCAGAGAATCAGCTGGGAAGCATTGAAGAAGAGCATC
AACGGTTTGATTAACAAAGTAAACGTTTCAAACATATCTTCCATTGTGAGAGAACTTTTT
CAAGAAAACATTGTTCGAGGAAGGGGTATTCTTGCTCAGTCAATACTGCAAGCTCAGAAT
GCATCACCCACTTTCACCCAAGTCTATGCCGCCCTGGTTTCTATCATCAACACTCGATTC
CCACAGAACGGAGAGCTAATCTTGAGGAGGCTGGCCATCCAGTTTCGACGATCCTATAAA
AGGAACAGGAAGGATGTTTGCCTTCATTCCTCCCAATTCATTGCACACCTGATTAATCAG
CAAGTGGCTCACGAGATCATAGGATTGCAGATACTGACCTTGTTGCTTGAAACCCCTTCA
GATGACTCAGTGGAAGTTGCTATCGGATTTCTTAAGGAGTGTGGACAAAAGCTTATGGAC
GTTTCACCTCGTGGCCTGGCTGCTGTCATGCAGAGATTGCGAACCGTCCTTCACGAACAA
GAATTGGACAAGAGAGTGCAGTACATGATTGAGGTCATGTTCGCGATACGAAAAGATGGA
TTCAAGGAACATCCGGCTGTCACTGAAGAACTGGACTTGGTTGAAGAATCGGATCAGTTC
ACGCACATGCTACAGCTTGAAGACGATGGGGGTGGTAAGGGAACTGAGAACGAGTTGAAT
GTTTTCCATGTCGATGAAGACTTTGTTCAAAATGAGGAGAACTATAAACAAATCAAGAAA
GATATCCTTGATGAAAGCAGCAGAGGCAGTTCTGGTAGTTCAGGTGATTCGTCATCCGAC
TCGTCAGAAGATGAAGCTCCTGAAGATGCGAAGACCCAGGAGATTGAAGACCTTACGGAA
ACAAACCTTGTCGCTTTGAGGAGGACAATATACCTGGCAATTCAATCCAGTCTTGATTTC
GAGGAATGTGCTCACAAGCTGTTGAAGATGGAGTTTGACGTCAAGGACTATAAAGAAATT
TGTGCCATGATCATAGACTGCTGTTCACAGCAGAGAACTTATGAAAAATTCTATGGACTG
TTGGGTGCTAGATTCTGTATTCTGAAGAAGGAATTCATGGAAAATTTCGAAATTCTTTTC
GCTGAACAGTATGGCGTAATTCATAGACTTGAAACCAACAAACTGCGAAATGTAGCCAAG
CTTTTCGCTCATTTTCTACATTCCGACGCACTCCCGTGGACTGTGCTGTCCAATATAAGA
CTGTCGGAAGACTCGACCACTTCGTCATCACGTATTTTCATCAAAATTCTCTTTCAAGAA
TTGGTTGAATATCTCGGACTTCAGAAATTGAACTTAAGATTGAAAGACGAAACATTGGCA
CCTTTCTTTGAAGGCCTCTTCCCAAGAGACAATCCGAAAGACACAAGATTTGCTATCAAT
TTTTTTACTTCGATTGGTCTAGGTGGAGTCACAGATGAACTGAGAGAGCATTTGAAAGAT
GCAGCTCGAGCAATGACTGAAAAATTGCAAGCGGAACAACTAGCTTCTTTGAATATGGAT
TCAACCAGCTCCGATTCTGATGATGAAAGCTCATCTGATGAGAAGTCAAAGAAAAACAAG
AGGAAGAAATCTTCTAAAACTAAGAAAAAAACGAGCAAGAAAAGTAAGTCCAAGAAAAAA
AAGAAATCTAAATCCAGCTCTAAATCTGAAGATTCGGAAGAATTGAAAAAACAAAGGGAG
TGGGAATCGGAAAGCGATTCTTCGTCGCCTGAAAGAAAAATGAAGTCGAGTGTTGTCATA
AAATCTCAGACTGGTTCGAGTAAAAACGAGAAGCCAGATGATGAGTCCAAGGGAAAAGCA
AAAGAGAACGGGGATAAGAAAAAAAGTAAGAGCATTTCTAAGAAAAAGAAGAGGCGTACA
CCGTCATCCTCATCTTCAGATGCGAGTTCCAGTTCTTCATCAGTTGACCAAGCCCAGAAA
AAGAAATCAGGAACTTTAAAAGAACGTCTTTTGAAAATCAGTAACACAACCTTCTCCAAA
GAAAGCTGCACGGACAGAAAGAGAGCAGAAATACTAGTAGTTCCGAAAGTAAACAAGAAA
TCCTCTGTGCGAGCAAAACGTAATAAACGTTCCAGTAGCAGTTCTGAATCCAGCAGTGAA
TCTTCAGAGAGCGATAGCGACTCCTCCGATGAAGCAGAAACAGCAAGAAAGTCCGAAAAG
AATAAGACTTTGAAGCAAAGGAAAAGAGACAGCAGTAATGAGAAACGCGATAAAGATAAA
AGAAACGGTGCGAGGCACCGAAAAAACAGCAGCGACGGAGCTTTAATTTACGAGAAAGAT
AAAACTCGTAAAAATGAAGGACGTTCACAGAGAATGGTTAATGAGGACAGTGATCGTTAC
GAGAGCAAACGTCGAGAAAGTCACGCCGTTCGAGGTCTCTCGGTAGATAGTCAAGTCGAG
AGCCGACCATCTGTCAAAGACATCAAATTTAAATATGGATTGCAACTGAAGTTTAAAAGA
CTTACATTGAACTCAGTTCTGCTCAATACAAACCTGTCCCTTTGTAAAGCAGGAAATAAT
AACATAAAAGAAGTAGTATACGATAAAAATACTAAGCAATGCTGTTCAGATGATGGTAAT
CTCGAAAGCCTTCACATAAGTTCTAAACAGCGCACAAAGCAATATAATAAAAGGCCTAGG
CAAGTTACCCATGGCATATAA
| Gene3D |
MIF4-like_sf (IPR016021) - T[30-323] 1.6E-93 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[65-288] 3.6E-62 |
| SMART |
MIF4G-like_typ-3 (IPR003890) - T[77-260] 4.8E-35 |
| ProSiteProfiles |
Initiation_fac_eIF4g_MI (IPR003891) - T[365-481] 21.381 |
| Pfam |
Initiation_fac_eIF4g_MI (IPR003891) - T[366-472] 2.0E-21 |
| SMART |
Initiation_fac_eIF4g_MI (IPR003891) - T[366-472] 1.1E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CWC22_HUMAN | 66.964 % | 762 | 0 |