- Transcript 'Moocci.CG.ELv1_2.S14...' >
- Clone 'ma166n13' >
- Clone 'AB178239_clone' >
- Transcript 'Cisavi.CG.ENS81.R83....' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1.g03253.01.t
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
S1 [923,541 / 936,212]
Amino acid sequence
Length: 899
>Harore.CG.MTP2014.S1.g03253.01.p
MEVLDETVDINTASVEEFVSRLKGVGRSKAKAIVHFRTTVGRFKKLCELTYVPGITQCIL
ERNQGVLFCVSNSNNLSKLHEINKSESSLEEGELSDSSFSLPGESEVDNRPRLNGQHLVV
EQDNITGRTRNWSLTPDINGNDHQEFTLDTPCTINQSIQDCIEDSDMNRSPVIQSLRSRS
KSKNEERTISTRSRHVSNKLRADMMSESSTNSVGNGVDSLTLSSPKSTRGKFTRTKKNLS
SEGLKADRITTRHMVESARPSTLCGTELRSGKHFLVNDADTQKISITARSKSGEELQTYA
ENLEGKSAGVTSSSGSMTKQVPSNKLLMKRKLDSRTDACKLQSPEKKACKTSLSLLPSPN
AALPTFGELREAVTRGIGNQNFSSDNKLPFERKDYESGGEILSVTSVRPKAPIKVEGLTQ
WLQKFKNWNSTERIAALDELIDSCEPRQVRYMLEVIEPQFQRDFISLLPKELALYVLSFL
EPKALLTAAQTCRYWHILTEDNLLWREKCDEEGINEPYYPKVCKNSWKCRKLNATNVQPS
AWKAAFLRQHRIEMNWRRGEHKSIKLLKGHDDHVITCLQFNGTRIVSGSDDNTLKVWSAV
SGKCLRTLTGHTGGVWASQMRKNMIISGSTDRTLKIWNVDSGQCIHTLHGHTSTVRCMAL
HDNIVVSGSRDATLRAWDVDTGECLHVLTGHMAAVRCVCYDGKLVVSGAYDYMVKVWDPV
KEECLHTLQGHTNRVYSLQFDGVHVVSGSLDTSIRVWSVETGLCLHTLVGHQSLTSGMEL
KNNILVSGNADSTVKMWDIITGDCLKTLEGPNKHQSAVTCLQFYGKFVVTSSDDGTVKLW
DVKSGKAIRDLVSLDSRGSGGVVWRIRASQTKLVCAVGSRNGTEETKLLVLDFDPDSKQ
Nucleotide sequence
Length: 2,700
>Harore.CG.MTP2014.S1.g03253.01.t
ATGGAAGTCTTGGACGAGACTGTTGACATAAATACTGCAAGTGTTGAAGAATTCGTATCT
AGACTCAAAGGTGTTGGAAGATCGAAGGCTAAAGCTATCGTACATTTCAGAACGACCGTC
GGCAGGTTTAAAAAACTTTGCGAACTGACTTACGTTCCTGGCATCACCCAATGCATATTG
GAAAGGAACCAAGGCGTGTTGTTCTGCGTCTCCAACTCGAACAACCTATCGAAATTACAC
GAAATCAATAAAAGCGAATCGTCTTTGGAAGAAGGAGAGTTGTCCGATTCTTCCTTCAGT
TTACCAGGTGAGAGTGAGGTTGATAATAGGCCGAGATTGAATGGGCAACATCTTGTAGTA
GAGCAGGATAACATAACCGGAAGGACAAGAAACTGGAGTCTCACACCAGACATTAATGGA
AACGATCATCAGGAATTTACTCTAGACACACCGTGCACAATAAATCAATCAATACAAGAT
TGTATAGAAGACTCCGATATGAACAGATCTCCTGTCATTCAGTCTCTAAGAAGTCGAAGC
AAAAGTAAAAATGAAGAAAGGACGATATCCACTAGAAGTCGACATGTCTCAAATAAATTG
AGGGCCGACATGATGTCTGAATCTTCGACCAACTCTGTGGGAAATGGAGTTGATTCCCTC
ACTCTTTCTTCCCCGAAATCTACACGTGGAAAGTTTACTAGAACCAAGAAAAATTTATCC
TCGGAGGGCCTCAAGGCTGACAGAATCACAACGCGTCACATGGTTGAAAGCGCCAGGCCT
AGCACGCTGTGCGGCACAGAGTTACGATCCGGCAAACACTTCCTAGTCAACGACGCCGAC
ACACAGAAAATTTCCATTACGGCTCGGTCAAAAAGCGGCGAAGAATTGCAGACATATGCG
GAAAACCTAGAGGGTAAATCTGCAGGGGTCACATCTTCATCAGGGTCAATGACCAAGCAA
GTTCCATCTAATAAACTTTTAATGAAAAGAAAATTGGACAGCAGGACAGATGCCTGCAAG
CTGCAATCGCCTGAAAAGAAAGCGTGCAAGACGTCGTTAAGTCTGCTACCGAGCCCCAAC
GCCGCATTGCCCACGTTCGGGGAGCTTCGAGAAGCAGTCACCAGGGGCATTGGAAATCAA
AACTTTTCTTCAGACAATAAACTTCCATTTGAAAGGAAAGACTATGAGTCCGGCGGGGAA
ATTCTATCTGTCACATCTGTCAGGCCAAAAGCACCTATAAAAGTTGAAGGCCTCACCCAA
TGGCTTCAAAAATTCAAAAACTGGAATTCAACCGAAAGGATCGCGGCCCTGGACGAACTG
ATCGACTCATGCGAGCCACGGCAGGTCCGGTACATGCTCGAAGTAATTGAACCACAATTT
CAGCGGGATTTTATTTCCCTTTTGCCCAAAGAGCTTGCCCTTTACGTCCTGTCATTCCTG
GAACCTAAAGCCCTACTAACCGCCGCACAAACTTGCCGATACTGGCACATCTTGACGGAA
GACAATCTCTTGTGGAGAGAAAAATGTGATGAAGAAGGCATAAACGAACCTTATTATCCG
AAAGTGTGTAAGAATTCATGGAAGTGTCGAAAACTGAATGCTACCAACGTGCAACCAAGC
GCCTGGAAAGCAGCATTCTTGCGACAGCACCGTATTGAAATGAACTGGAGGAGAGGTGAA
CATAAATCAATCAAGTTACTCAAGGGCCATGACGATCATGTGATAACATGCTTGCAGTTC
AACGGCACTAGAATAGTGAGTGGCTCAGATGACAACACATTGAAGGTTTGGTCTGCAGTA
TCAGGCAAGTGTTTGAGAACGTTAACCGGTCATACGGGAGGTGTCTGGGCTTCGCAGATG
CGTAAGAACATGATCATTAGCGGTTCAACTGACAGAACTTTGAAGATATGGAATGTCGAT
TCAGGTCAGTGTATTCATACACTTCATGGGCATACGTCGACAGTTCGTTGCATGGCTCTG
CATGATAATATTGTTGTAAGCGGTTCCAGAGATGCCACGTTGCGTGCCTGGGACGTTGAC
ACCGGTGAATGCCTCCACGTTCTGACTGGGCACATGGCAGCAGTGAGGTGCGTGTGCTAT
GATGGAAAACTGGTTGTGTCTGGAGCTTACGATTATATGGTCAAGGTTTGGGATCCTGTA
AAAGAGGAATGTCTGCATACACTTCAAGGCCATACTAATAGAGTGTATTCTTTACAATTT
GATGGAGTTCATGTTGTCAGCGGTAGTCTGGATACTTCGATTCGTGTGTGGTCAGTGGAA
ACCGGCCTGTGTCTTCACACCTTGGTCGGGCACCAATCACTGACTTCAGGGATGGAGCTC
AAAAATAATATCTTGGTGTCGGGGAATGCGGATTCAACAGTCAAAATGTGGGATATAATC
ACAGGGGATTGTTTGAAGACCCTTGAAGGTCCCAACAAGCATCAGAGTGCTGTAACTTGT
CTTCAGTTCTATGGGAAATTTGTTGTCACTAGCTCAGATGATGGAACAGTCAAACTTTGG
GATGTGAAATCCGGGAAGGCAATACGTGATCTTGTCTCCCTCGATTCGCGAGGATCCGGC
GGCGTTGTGTGGAGAATCCGCGCTTCTCAAACAAAGCTCGTCTGTGCAGTGGGCAGCAGA
AATGGTACCGAGGAGACGAAGCTGCTTGTTCTCGATTTTGATCCGGATTCTAAACAGTGA
| SUPERFAMILY |
RuvA_2-like (IPR010994) - T[6-63] 2.11E-13 |
| TIGRFAM |
Competence_ComEA_HhH (IPR004509) - T[7-67] 1.2E-15 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[449-554] 5.63E-21 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[462-508] 11.697 |
| Pfam |
F-box_dom (IPR001810) - T[466-509] 1.1E-10 |
| SMART |
F-box_dom (IPR001810) - T[468-508] 3.6E-5 |
| SMART |
WD40_repeat (IPR001680) - T[560-598] 6.5E-6 - T[601-638] 3.3E-7 - T[641-678] 8.2E-9 - T[681-718] 5.8E-7 - T[721-758] 1.1E-7 - T[761-798] 0.016 - T[801-841] 5.1E-7 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[560-898] 8.8E-122 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[560-883] 1.83E-93 |
| Pfam |
WD40_repeat (IPR001680) - T[564-598] 6.0E-6 - T[602-638] 2.8E-5 - T[642-678] 9.8E-5 - T[682-718] 4.1E-7 - T[723-758] 2.1E-6 - T[764-798] 0.016 - T[802-841] 3.6E-7 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[567-850] 64.541 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[581-607] 10.375 - T[608-647] 13.048 - T[648-687] 14.285 - T[688-727] 11.177 - T[728-767] 13.249 - T[768-807] 11.879 - T[811-850] 13.583 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[625-639] 1.7E-8 - T[785-799] 1.7E-8 - T[828-842] 1.7E-8 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[625-639] . - T[665-679] . - T[785-799] . - T[828-842] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 70.261 % | 806 | 0 |
| FBW1A_HUMAN | 31.567 % | 236 | 1.78E-67 |
| FBW1B_HUMAN | 30.562 % | 233 | 4.24E-67 |