- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1.g03253.02.t
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
S1 [932,135 / 936,212]
Amino acid sequence
Length: 598
>Harore.CG.MTP2014.S1.g03253.02.p
MINIFAWYESWSVFIIVKSCFTLAISMKRKLDSRTDACKLQSPEKKACKTSLSLLPSPNA
ALPTFGELREAVTRGIGNQNFSSDNKLPFERKDYESGGEILSVTSVRPKAPIKVEGLTQW
LQKFKNWNSTERIAALDELIDSCEPRQVRYMLEVIEPQFQRDFISLLPKELALYVLSFLE
PKALLTAAQTCRYWHILTEDNLLWREKCDEEGINEPYYPKVCKNSWKCRKLNATNVQPSA
WKAAFLRQHRIEMNWRRGEHKSIKLLKGHDDHVITCLQFNGTRIVSGSDDNTLKVWSAVS
GKCLRTLTGHTGGVWASQMRKNMIISGSTDRTLKIWNVDSGQCIHTLHGHTSTVRCMALH
DNIVVSGSRDATLRAWDVDTGECLHVLTGHMAAVRCVCYDGKLVVSGAYDYMVKVWDPVK
EECLHTLQGHTNRVYSLQFDGVHVVSGSLDTSIRVWSVETGLCLHTLVGHQSLTSGMELK
NNILVSGNADSTVKMWDIITGDCLKTLEGPNKHQSAVTCLQFYGKFVVTSSDDGTVKLWD
VKSGKAIRDLVSLDSRGSGGVVWRIRASQTKLVCAVGSRNGTEETKLLVLDFDPDSKQ
Nucleotide sequence
Length: 1,797
>Harore.CG.MTP2014.S1.g03253.02.t
ATGATTAACATTTTTGCTTGGTATGAATCATGGTCGGTTTTCATTATCGTTAAGAGCTGT
TTCACTTTAGCTATCTCGATGAAAAGAAAATTGGACAGCAGGACAGATGCCTGCAAGCTG
CAATCGCCTGAAAAGAAAGCGTGCAAGACGTCGTTAAGTCTGCTACCGAGCCCCAACGCC
GCATTGCCCACGTTCGGGGAGCTTCGAGAAGCAGTCACCAGGGGCATTGGAAATCAAAAC
TTTTCTTCAGACAATAAACTTCCATTTGAAAGGAAAGACTATGAGTCCGGCGGGGAAATT
CTATCTGTCACATCTGTCAGGCCAAAAGCACCTATAAAAGTTGAAGGCCTCACCCAATGG
CTTCAAAAATTCAAAAACTGGAATTCAACCGAAAGGATCGCGGCCCTGGACGAACTGATC
GACTCATGCGAGCCACGGCAGGTCCGGTACATGCTCGAAGTAATTGAACCACAATTTCAG
CGGGATTTTATTTCCCTTTTGCCCAAAGAGCTTGCCCTTTACGTCCTGTCATTCCTGGAA
CCTAAAGCCCTACTAACCGCCGCACAAACTTGCCGATACTGGCACATCTTGACGGAAGAC
AATCTCTTGTGGAGAGAAAAATGTGATGAAGAAGGCATAAACGAACCTTATTATCCGAAA
GTGTGTAAGAATTCATGGAAGTGTCGAAAACTGAATGCTACCAACGTGCAACCAAGCGCC
TGGAAAGCAGCATTCTTGCGACAGCACCGTATTGAAATGAACTGGAGGAGAGGTGAACAT
AAATCAATCAAGTTACTCAAGGGCCATGACGATCATGTGATAACATGCTTGCAGTTCAAC
GGCACTAGAATAGTGAGTGGCTCAGATGACAACACATTGAAGGTTTGGTCTGCAGTATCA
GGCAAGTGTTTGAGAACGTTAACCGGTCATACGGGAGGTGTCTGGGCTTCGCAGATGCGT
AAGAACATGATCATTAGCGGTTCAACTGACAGAACTTTGAAGATATGGAATGTCGATTCA
GGTCAGTGTATTCATACACTTCATGGGCATACGTCGACAGTTCGTTGCATGGCTCTGCAT
GATAATATTGTTGTAAGCGGTTCCAGAGATGCCACGTTGCGTGCCTGGGACGTTGACACC
GGTGAATGCCTCCACGTTCTGACTGGGCACATGGCAGCAGTGAGGTGCGTGTGCTATGAT
GGAAAACTGGTTGTGTCTGGAGCTTACGATTATATGGTCAAGGTTTGGGATCCTGTAAAA
GAGGAATGTCTGCATACACTTCAAGGCCATACTAATAGAGTGTATTCTTTACAATTTGAT
GGAGTTCATGTTGTCAGCGGTAGTCTGGATACTTCGATTCGTGTGTGGTCAGTGGAAACC
GGCCTGTGTCTTCACACCTTGGTCGGGCACCAATCACTGACTTCAGGGATGGAGCTCAAA
AATAATATCTTGGTGTCGGGGAATGCGGATTCAACAGTCAAAATGTGGGATATAATCACA
GGGGATTGTTTGAAGACCCTTGAAGGTCCCAACAAGCATCAGAGTGCTGTAACTTGTCTT
CAGTTCTATGGGAAATTTGTTGTCACTAGCTCAGATGATGGAACAGTCAAACTTTGGGAT
GTGAAATCCGGGAAGGCAATACGTGATCTTGTCTCCCTCGATTCGCGAGGATCCGGCGGC
GTTGTGTGGAGAATCCGCGCTTCTCAAACAAAGCTCGTCTGTGCAGTGGGCAGCAGAAAT
GGTACCGAGGAGACGAAGCTGCTTGTTCTCGATTTTGATCCGGATTCTAAACAGTGA
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[148-253] 3.53E-21 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[161-207] 11.697 |
| Pfam |
F-box_dom (IPR001810) - T[165-208] 6.9E-11 |
| SMART |
F-box_dom (IPR001810) - T[167-207] 3.6E-5 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[259-597] 3.3E-122 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[259-582] 6.96E-94 |
| SMART |
WD40_repeat (IPR001680) - T[259-297] 6.5E-6 - T[300-337] 3.3E-7 - T[340-377] 8.2E-9 - T[380-417] 5.8E-7 - T[420-457] 1.1E-7 - T[460-497] 0.016 - T[500-540] 5.1E-7 |
| Pfam |
WD40_repeat (IPR001680) - T[263-297] 3.7E-6 - T[301-337] 1.7E-5 - T[341-377] 6.0E-5 - T[381-417] 2.5E-7 - T[422-457] 1.3E-6 - T[463-497] 0.0096 - T[501-540] 2.2E-7 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[266-549] 64.541 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[280-306] 10.375 - T[307-346] 13.048 - T[347-386] 14.285 - T[387-426] 11.177 - T[427-466] 13.249 - T[467-506] 11.879 - T[510-549] 13.583 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[324-338] 5.4E-9 - T[484-498] 5.4E-9 - T[527-541] 5.4E-9 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[324-338] . - T[364-378] . - T[484-498] . - T[527-541] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 69.535 % | 800 | 0 |
| FBW1A_HUMAN | 31.567 % | 234 | 3.01E-69 |
| FBW1B_HUMAN | 30.562 % | 233 | 2.71E-69 |