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  1. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1.g04655.02.t

Possible name(s)

DCTN5; IDUA

Location

S1 [520,973 / 523,617]

Sequences

Amino acid sequence

Length: 769

>Harore.CG.MTP2014.S1.g04655.02.p
MGHTTVSMFLLLCLVFTFTSGLKSTQIQVNIDATEKIGNLNHFWESTGLCPPMPHQNASK
YYLSEDMLQNIMMISSVPHNGMKQVRMHWLLDMVTFDESTSSYNFDKLDILLQRLRKYKL
KPGFELMGSPSNIFTNFDDEAQVKEWQRFVTTLATRYVKMFGLEDVSQWNFETWNEPDHK
DFDDVKMSVKGFLKYYDASSKGLGEVDKSLVFGGPGGSCRKESFSKRCWALMAHCTNGTN
YITGKKGSRINYISIHKKGSGSSKYIIDTELETVEKIHWMYPALRNVPIYNDEGDPIVGW
SKPYEWRGDVTYPAIVTKIIAQHLYKIINNKSSSIRYQLLSNDNGFLNYYPYYFTQRTLL
ARFQMNNTHPKHVHFVKKPIHGVMTLLSKLGNVQVKAAIESGTSDVVGVIASSGSSSEIT
VIAYASVDTLPSTDTYMLNFDIRNTNRNTTAVMMACTLNNELTNPYRVWKEIGKPDFPSS
SDFQKMHQSAEPACSVPRKIDTSIGLTFNQEMLLPGVTLFQICWKQPSGVYKGPDIISVR
NITSGQVLIVWDDIMIKTKCIKTYELEICHDKGCTVVKKLNSYTLISNSFVYISSDGDKG
VIGWYRIRFVDFWDRYSPYSNIASGNKVSRQSVLCGSQNIVLNGKTIVQNDCIIRGDLAN
VRVGRQCVIKSRSVIRPAFKKFSKGVAFFPSIIGDHVYIEEDSVINSAQIGSYVHIGKNC
VIGRRCVLKDCCMVTENTVLPPETVVPPFCIFSGSPGKLESVCIRLPSK

Nucleotide sequence

Length: 2,310

>Harore.CG.MTP2014.S1.g04655.02.t
ATGGGTCACACAACGGTTTCTATGTTTTTGCTGTTATGTCTCGTTTTTACGTTCACGAGT
GGATTAAAATCCACCCAAATTCAAGTAAACATCGATGCCACTGAAAAAATAGGAAATTTA
AACCACTTTTGGGAGAGCACTGGTCTCTGTCCGCCCATGCCTCACCAAAACGCGTCCAAA
TATTATTTGAGCGAGGACATGTTGCAGAACATAATGATGATTAGTTCGGTGCCCCACAAC
GGCATGAAGCAAGTGAGAATGCACTGGCTTTTGGATATGGTGACTTTTGACGAGAGTACG
AGCAGTTACAATTTTGATAAACTAGACATCCTTCTGCAAAGACTAAGGAAATATAAATTG
AAGCCAGGCTTTGAACTGATGGGAAGTCCTTCGAACATATTTACTAACTTTGATGATGAG
GCTCAAGTTAAGGAATGGCAGAGGTTCGTAACGACATTGGCGACGCGGTACGTGAAAATG
TTTGGACTTGAAGACGTGTCCCAGTGGAATTTCGAAACATGGAACGAACCTGACCACAAA
GATTTTGATGATGTTAAAATGTCAGTCAAAGGATTCTTGAAGTATTATGACGCTTCCTCA
AAGGGACTGGGGGAAGTAGATAAGTCACTTGTATTTGGGGGCCCAGGGGGATCTTGCAGG
AAGGAGTCTTTCTCGAAACGCTGCTGGGCCTTGATGGCTCACTGCACGAATGGCACAAAC
TATATCACAGGCAAGAAAGGAAGCAGGATCAATTACATTTCGATACACAAAAAAGGGTCT
GGGAGTTCTAAATATATCATTGATACGGAATTAGAAACCGTAGAGAAAATTCATTGGATG
TACCCAGCGCTCAGAAATGTGCCTATATATAACGATGAAGGCGATCCTATAGTGGGATGG
AGCAAGCCTTATGAATGGAGAGGAGATGTTACCTATCCAGCTATCGTAACTAAAATTATC
GCTCAACATTTGTATAAAATTATCAACAACAAAAGTAGTTCCATCAGGTATCAGCTACTA
AGCAATGATAATGGTTTTCTCAATTATTACCCATATTACTTTACGCAACGAACATTGCTA
GCTCGATTTCAAATGAATAACACTCACCCGAAGCACGTACACTTTGTCAAAAAACCAATA
CATGGTGTGATGACTCTTCTTTCCAAACTCGGTAATGTTCAAGTCAAAGCCGCAATCGAG
TCTGGCACTTCCGATGTTGTGGGAGTCATCGCATCTTCAGGCTCAAGTTCTGAAATTACT
GTCATAGCTTATGCAAGTGTAGACACGCTACCGAGCACAGACACCTACATGTTGAACTTT
GATATACGTAATACCAATCGAAATACCACCGCCGTGATGATGGCCTGTACTTTAAATAAC
GAGCTGACCAATCCCTACAGGGTTTGGAAAGAAATAGGCAAACCAGACTTTCCAAGTTCG
TCGGATTTTCAAAAAATGCATCAATCAGCAGAGCCTGCATGTAGCGTACCGAGAAAAATT
GACACTTCCATAGGTCTAACCTTCAATCAAGAAATGCTTTTACCTGGGGTCACTCTCTTC
CAAATATGTTGGAAGCAACCATCAGGAGTTTACAAAGGACCAGATATTATATCTGTTCGC
AATATCACATCTGGACAAGTCTTGATTGTATGGGACGATATCATGATAAAAACAAAATGC
ATCAAGACATATGAATTGGAAATCTGTCACGACAAAGGCTGCACTGTTGTGAAAAAACTG
AATTCATACACACTTATATCAAATTCGTTTGTGTATATATCATCAGACGGGGACAAGGGC
GTCATTGGGTGGTATAGAATAAGATTTGTGGATTTTTGGGACAGATATAGTCCGTATTCA
AACATTGCCTCAGGGAACAAGGTTAGCCGACAGTCAGTCCTATGCGGAAGTCAAAACATA
GTGTTAAATGGGAAGACTATAGTTCAAAATGATTGCATCATCAGAGGAGATCTGGCTAAC
GTGCGAGTTGGGAGACAATGCGTCATAAAGAGTCGCTCTGTGATCCGGCCAGCTTTTAAA
AAGTTTAGCAAAGGGGTTGCGTTTTTCCCATCCATCATCGGAGACCACGTTTACATAGAA
GAGGATTCTGTAATCAATTCCGCGCAAATTGGTTCTTACGTGCACATAGGGAAGAATTGT
GTAATTGGAAGACGGTGTGTTTTAAAAGATTGCTGCATGGTCACAGAAAATACTGTATTG
CCCCCGGAAACTGTAGTGCCACCGTTTTGTATTTTCTCTGGATCTCCTGGTAAGTTGGAA
TCCGTATGCATCAGATTACCCAGCAAATAA

InterProScan

Pfam
Glyco_hydro_39 (IPR000514) - T[31-523] 1.6E-104
SUPERFAMILY
Glycoside_hydrolase_SF (IPR017853) - T[41-391] 3.61E-45
PRINTS
Glyco_hydro_39 (IPR000514) - T[108-124] 2.9E-27 - T[149-166] 2.9E-27 - T[166-182] 2.9E-27 - T[242-256] 2.9E-27 - T[305-322] 2.9E-27 - T[458-469] 2.9E-27 - T[469-483] 2.9E-27
ProSitePatterns
Glyco_hydro_39 (IPR000514) - T[169-178] .
SUPERFAMILY
Trimer_LpxA-like_sf (IPR011004) - T[616-759] 4.29E-25
Pfam
Hexapep (IPR001451) - T[707-735] 3.6E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DCTN5_HUMAN 84.397 % 252 1.93E-79
IDUA_HUMAN 42.157 % 503 1.09E-169





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