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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C3.192.v2....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S9...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1.g05363.01.t

Possible name(s)

TFG

Gene model

Harore.CG.MTP2014.S1.g05363

Location

S1 [1,088,207 / 1,089,659]

Sequences

Amino acid sequence

Length: 483

>Harore.CG.MTP2014.S1.g05363.01.p
MDLSGKLIIKARLGDDVRRIPIHNEDLTYDELILMMQRVFRNTLKPSDEIVIKYADEDGD
LITIFDDSDITLAIQLSRILKLTIQYKNDVCEGIVAPSLKNLRNELVVIRNRVNLILDSL
SGEDSESQTKQPRETGSTAAQEAAPESPRSAPAATSLAKDSGSSDSKLYNSSMFDPLTNA
TKSASGTLTAFTGARETISSPTGSVASKTSTDPMAESQPPPPGRPQSTQNVVQSSFEQSV
PLQNDYQQNSLHHTNHLQSSFGDAALGGPQPGLHDQKAPQVPPNQYQQNVVAQPNAQGKP
VGFPPQPASSQTAAQLAPGQSYGQYNSQQPMPTKPMPQAQSQYSTSMSRQQDYPGSTPSN
LPAATTQYGYNYSPSISQNPYPTQANTAQQYQPASANSQSYRTQPTAQYQQPQNPYGGNA
TTLSSNQQYHSATPPAQAYPPPGAPGVNYPNPAGYQQTTSANPHRLIRSGPGYRARQPGP
GYQ

Nucleotide sequence

Length: 1,452

>Harore.CG.MTP2014.S1.g05363.01.t
ATGGATCTTAGTGGTAAATTAATCATCAAAGCCCGTCTGGGTGATGATGTCAGACGTATA
CCTATTCACAATGAAGATCTAACCTATGATGAACTTATACTAATGATGCAAAGAGTATTT
CGCAATACTTTAAAACCGAGCGACGAAATAGTCATAAAATATGCCGATGAGGATGGAGAT
TTAATTACAATATTTGATGATTCTGACATAACGCTGGCAATTCAACTGAGTCGCATTCTT
AAACTGACTATTCAGTACAAAAACGATGTCTGCGAAGGCATTGTAGCTCCTTCTCTGAAG
AATCTTCGAAATGAGCTGGTTGTTATTAGGAACAGAGTCAATCTTATCTTAGATTCTCTT
TCAGGAGAGGACAGTGAATCGCAAACTAAACAACCTAGAGAAACAGGTAGCACTGCAGCA
CAAGAAGCTGCCCCAGAATCCCCAAGGTCTGCTCCCGCTGCTACTTCACTTGCTAAGGAT
AGCGGGAGTAGTGATAGCAAATTGTATAACAGTTCCATGTTCGACCCACTTACGAACGCG
ACAAAGAGTGCCAGTGGAACTTTGACTGCTTTCACCGGTGCTAGAGAAACTATCTCCAGT
CCCACTGGAAGTGTGGCAAGCAAAACTTCAACAGATCCTATGGCAGAGAGCCAGCCACCC
CCTCCTGGACGACCTCAATCTACTCAAAACGTTGTCCAATCATCTTTTGAACAGTCTGTT
CCTTTGCAAAATGATTATCAACAGAATTCACTTCACCACACCAATCATCTTCAATCCTCC
TTTGGAGATGCTGCTTTGGGTGGTCCGCAACCTGGCTTGCACGATCAAAAAGCCCCCCAG
GTTCCTCCGAACCAATATCAACAAAATGTGGTTGCCCAGCCTAATGCTCAGGGCAAACCC
GTGGGTTTCCCTCCACAGCCTGCATCATCTCAAACTGCTGCTCAACTCGCTCCCGGACAA
TCTTATGGGCAATACAACAGTCAGCAACCGATGCCAACTAAGCCCATGCCTCAAGCCCAG
TCTCAATATTCTACATCAATGTCTAGGCAACAAGACTATCCTGGATCTACACCTTCCAAC
CTTCCTGCTGCTACCACTCAATACGGGTACAATTACTCCCCGAGCATCTCACAAAATCCA
TACCCGACCCAAGCAAATACAGCCCAGCAATACCAACCAGCTAGCGCAAACAGCCAGTCT
TATAGGACCCAGCCGACCGCGCAGTACCAACAGCCACAAAATCCATATGGTGGGAATGCC
ACAACTCTTTCCTCGAATCAGCAGTACCATTCTGCCACACCACCGGCCCAAGCCTACCCA
CCACCCGGAGCACCGGGTGTGAATTACCCCAACCCAGCAGGTTATCAACAGACAACTTCA
GCCAACCCTCACAGGTTAATTCGAAGCGGACCAGGATACAGGGCACGACAGCCCGGACCA
GGCTATCAGTAG

InterProScan

SMART
PB1_dom (IPR000270) - T[6-87] 1.2E-15
ProSiteProfiles
PB1_dom (IPR000270) - T[6-87] 22.263
CDD
PB1_TFG (IPR034857) - T[7-84] 1.88473E-39
Pfam
PB1_dom (IPR000270) - T[9-82] 1.0E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TFG_HUMAN 46.083 % 178 3.6E-51