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TRANSCRIPT CARD

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  1. Transcript 'Mooccu.CG.ELv1_2.S66...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1.g05814.01.t

Possible name(s)

RPL13

Gene model

Harore.CG.MTP2014.S1.g05814

Location

S1 [513,359 / 520,068]

Sequences

Amino acid sequence

Length: 319

>Harore.CG.MTP2014.S1.g05814.01.p
MLELDSERAEKESLQARLWGMERNLKILQSERDVLEEKLRDCISTFADLRKNISMNSGSG
ENVVDISNCMDKIKGLQALMQKLIEAHRQEHINFISITYWRFTGENMAIKHNNVIANNHF
HKKWQTRVKTWFNQPARKHRRYTKRVEKAKRIAPRPLKHLRPIVRCPTVKYNMKRRLGRG
FSFEELKAAGINRKFAQTIGISVDHRRRNKSYESLQENVQRLKEYRSKLILFPKKLGQPK
KGDSSAEEIKMATQYSGTILPMKQKQVREKARAITDEERKHRVFQDMRMTRSNTKLKGLR
AKIKKQKEEAAAQAAPKKK

Nucleotide sequence

Length: 1,645

>Harore.CG.MTP2014.S1.g05814.01.t
AAAGATACATTCCAATATGGTACAGTACTGAAAACTTTTTTGTGTGCTTGATTGATATGT
GAGATCCTACACTCAATAATTTCTACGACTTCGATCACAATTGAAGTGCCCTCGTTCACT
GTACAGCTATTTGTTTCGTATATATATCTACATATGATGTCACAATTGCATGTAAAAATC
TGGTCTAACAATTGGTTGAAATCTAGTCCCTTCCGTAAATATAGGTATCAACGTCTGTGC
CCCTGTTTTTCAGGTGATATTAACTTTACTTGAAGCAAAATGCCGCGCTATTGTCGAGTA
AAAGCTGAGGCATTTTCAGAAAGTAAATCGTTTTCAAACCCTTATCAAAGCGTCTGCGAA
ACTATTATACCTTTCCTTGGAATCGATCCCGGATCGGACGACGAGGACGACTCGTGGTTC
ACTTGGGTGTTGAACGGTTTGCTTGTCGTTCTCGATCCCAAATCTTGTTGGTTCCAAGTG
TTCATTTTGTTCATGGTTACCGGAATCGCGTTCATGCTTGGAGTGTACTTGAGGCGACGC
ACAATCCTTGGTTTGCTAAGACAAAAAGAAGAATGGGTAGACAAGGAAAAGATGTTATTG
AATCAACTGTGGGCCGCGTTAGAGGAGAAGCTCGAAGCAAAATCGATGTTACATGAAACG
CGAACTTCAGTAGACAAAGTAAAAGATGTTGGAACTTGATTCGGAGAGGGCAGAAAAAGA
ATCATTGCAAGCAAGATTGTGGGGAATGGAACGAAATTTGAAGATTCTTCAGTCAGAGCG
AGATGTTTTGGAAGAAAAACTGAGAGATTGTATCAGTACATTTGCTGATTTGAGAAAGAA
TATCAGCATGAATTCTGGAAGTGGAGAGAATGTCGTCGATATATCCAATTGCATGGACAA
AATCAAAGGATTACAGGCACTTATGCAGAAATTAATAGAAGCTCATCGGCAAGAGCACAT
TAATTTCATTTCAATAACGTATTGGCGGTTTACAGGTGAAAATATGGCGATCAAGCACAA
CAACGTTATCGCGAACAACCACTTTCACAAAAAGTGGCAAACCCGGGTAAAAACATGGTT
TAATCAACCAGCACGGAAACATAGAAGGTATACCAAACGTGTGGAAAAGGCAAAACGTAT
TGCTCCCCGTCCTTTGAAACACCTTCGTCCGATCGTTCGTTGTCCCACAGTAAAGTACAA
TATGAAGAGACGTCTCGGTCGTGGATTTTCGTTTGAAGAACTGAAGGCTGCAGGAATAAA
CAGAAAATTCGCCCAAACGATCGGAATTTCTGTTGATCATCGTAGGAGAAATAAATCCTA
TGAATCCTTGCAGGAAAATGTCCAGCGTCTTAAAGAATACCGATCCAAGCTCATACTTTT
CCCCAAAAAATTGGGGCAACCCAAGAAGGGTGATAGTTCGGCGGAAGAAATTAAAATGGC
CACTCAATATTCTGGAACAATATTGCCCATGAAACAGAAACAAGTCCGTGAAAAGGCTCG
TGCCATTACCGATGAAGAGCGCAAGCACCGTGTGTTCCAGGATATGCGTATGACCAGGTC
TAACACTAAACTCAAGGGACTTCGAGCCAAGATAAAGAAACAAAAGGAGGAAGCTGCTGC
TCAGGCCGCACCAAAGAAGAAGTAA

InterProScan

PANTHER
Ribosomal_L13e (IPR001380) - T[60-310] 1.1E-79
Pfam
Ribosomal_L13e (IPR001380) - T[114-291] 5.4E-81
Hamap
Ribosomal_L13e (IPR001380) - T[152-234] 22.123
ProSitePatterns
Ribosomal_L13e_CS (IPR018256) - T[176-190] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL13_HUMAN 61.215 % 245 2.75E-81