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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1.g05924.01.t

Possible name(s)

COPS2; PSMD11

Gene model

Harore.CG.MTP2014.S1.g05924

Location

S1 [218,007 / 221,996]

Sequences

Amino acid sequence

Length: 420

>Harore.CG.MTP2014.S1.g05924.01.p
MAASMEFERAQTMGMRDQKSAINIFKDIVKRDVKSTDEEGIKLKEQSILELGNLLQKQGH
AEELGGLVKGVRPFLKSISKAKAAKLVRTLVDLFLDMEAGTGLEVQLCKECIEWAKEEKR
TFLRQALEARLVALFFDTKKYEEALKLGTSLLKELKKLDDKQLLVEVQLTESRTYHALGN
LQKSRAALTSARTTANSIYCPPKMQAALDLQSGILHAAGEKDWKTAYSYFYEAFEGYDSI
ESKRAVSALKYMLLCKIMLKSPEDVQSIVSGKLALKYAGREIDAMKSIAKSSQNRSISEL
KISLTEYEKELKTDVIICAHLDKLHDHLLEQNLLRIIEPFSRVQVEHVASIIGINLSIIE
KKLSQMILDKKFHGILSQGEGVLIQFDEPPVDKTYKTALEVITGMSLVVDSLYQKAKRLT

Nucleotide sequence

Length: 1,695

>Harore.CG.MTP2014.S1.g05924.01.t
ATTATTCTATTATTTTCTCAGTAGATTTCACGAACATTGCAATTAATAGTTGATTTTGGA
AAAAAGAAAAGGTTTATCCGTAGTATTACTATTAACTTCCTGAGGCGAAGGACTATCCTA
GTTTGAATCGTAGTTAACCAGTTCCAAAACCTTCACTATGGCTGCATCGATGGAGTTTGA
ACGAGCGCAAACAATGGGTATGCGAGATCAGAAAAGCGCTATTAATATTTTCAAGGATAT
TGTTAAGAGAGATGTGAAGAGTACAGATGAAGAAGGAATCAAGTTAAAAGAACAAAGTAT
TCTAGAATTGGGGAACCTACTCCAGAAACAAGGACATGCAGAAGAACTCGGAGGACTCGT
CAAGGGTGTTCGACCTTTTCTGAAATCGATAAGCAAAGCAAAGGCAGCTAAACTAGTACG
TACGTTGGTTGACCTTTTTCTCGACATGGAAGCAGGAACAGGACTCGAGGTTCAACTCTG
CAAAGAGTGCATTGAATGGGCTAAAGAGGAAAAGAGAACGTTCCTCCGACAGGCACTAGA
AGCCAGACTCGTGGCTTTGTTCTTTGACACCAAGAAGTATGAGGAAGCACTGAAGTTAGG
TACTTCGCTTCTGAAAGAACTTAAAAAACTCGATGACAAACAACTACTTGTCGAAGTCCA
GTTAACAGAGTCAAGAACATATCATGCACTGGGTAACCTTCAGAAATCACGTGCCGCACT
GACATCTGCCCGTACCACTGCAAATTCGATATACTGCCCACCAAAGATGCAAGCAGCTCT
TGACTTACAGTCTGGTATTTTACATGCAGCAGGAGAAAAGGATTGGAAAACAGCTTACTC
ATATTTTTATGAGGCGTTCGAAGGATACGACTCCATTGAAAGTAAGCGGGCCGTGTCGGC
GCTCAAATACATGTTGCTGTGCAAAATAATGCTCAAAAGTCCCGAAGATGTGCAGTCCAT
CGTCAGTGGAAAATTAGCCTTGAAGTATGCAGGAAGAGAGATTGACGCAATGAAAAGCAT
AGCAAAGTCAAGTCAAAACAGATCGATATCGGAACTGAAAATATCGCTGACAGAATATGA
GAAAGAATTGAAAACGGACGTGATCATCTGTGCACATCTTGATAAATTACACGACCACCT
CTTGGAACAGAATCTCCTAAGAATAATCGAACCATTTTCCAGGGTGCAGGTTGAACATGT
TGCAAGCATTATTGGTATTAATCTGAGCATCATTGAGAAAAAGTTATCACAAATGATATT
GGACAAGAAGTTCCATGGCATTTTATCTCAGGGCGAAGGTGTCTTAATCCAATTTGACGA
ACCACCTGTTGACAAAACCTACAAAACTGCACTAGAAGTGATCACGGGTATGTCGCTCGT
CGTTGACAGTCTCTATCAGAAAGCGAAGCGGCTCACTTAAATCCTCCGTCCATCGCTGTT
TTAAACTGTTGCTAGAATGGGATCAGTTTATGGAAAAACTCTTTTGCGAGATTAGTTACT
ATAGTAAATATCCTTAAATCTACTGTGTATAACTTGTAAGTATCTTTTGCTCTCCACTCA
TACTCATAGGAATATATATTTTCCTATGGCCAATTAGATCTTGACTTCACTCAAAACTTT
ATCCTTGCTTATATTTTCTGTGTTGAATTAACTGCATAGAATTTTTCACTCTATGCTGCT
GAAATCTCCATCTTC

InterProScan

PANTHER
PSMD11 (IPR035295) - T[2-420] 1.3E-209
Pfam
PCI_dom (IPR000717) - T[284-384] 2.0E-12
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[314-395] 4.35E-15
SMART
PCI_dom (IPR000717) - T[319-402] 2.2E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSD11_HUMAN 70.644 % 632 0
CSN2_HUMAN 27.092 % 84.3 1.24E-17