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TRANSCRIPT CARD

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  1. Clone 'cign045h08' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Cisavi.CG.ENS81.R143...' > 
  4. Transcript 'Harore.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S1.g06881.01.t

Possible name(s)

ACTA1; ACTA2; ACTC1

Gene model

Harore.CG.MTP2014.S1.g06881

Location

S1 [960,418 / 961,792]

Sequences

Amino acid sequence

Length: 378

>Harore.CG.MTP2014.S1.g06881.01.p
MSDGEEDQTAIVCDNGSGLVKSGFAGDDAPRAVFPSTVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
SKQEYDEAGPSIVHRKCF

Nucleotide sequence

Length: 1,137

>Harore.CG.MTP2014.S1.g06881.01.t
ATGTCTGACGGTGAAGAAGATCAAACCGCCATCGTCTGTGACAACGGATCAGGATTGGTT
AAATCTGGATTCGCCGGTGATGACGCTCCCAGAGCTGTTTTTCCATCCACCGTCGGACGA
CCAAGACATCAAGGTGTCATGGTTGGTATGGGACAGAAAGACAGTTATGTCGGTGATGAA
GCCCAAAGTAAAAGAGGAATTCTCACTCTCAAATATCCAATTGAACATGGAATCATTACA
AACTGGGACGATATGGAAAAGATTTGGCATCATACTTTCTACAATGAACTTCGTGTTGCT
CCTGAAGAACATCCCACTCTTCTTACGGAAGCTCCACTCAACCCTAAAGCCAACAGAGAG
AAGATGACTCAGATTATGTTTGAAACCTTCAACGTTCCGGCAATGTACGTCGCTATTCAA
GCTGTTCTTTCGCTTTATGCATCAGGAAGAACTACAGGAATCGTTTTGGATTCTGGAGAC
GGTGTTTCACATAACGTGCCAATTTATGAAGGATACGCTCTTCCACATGCAATTGCAAGA
CTCGATCTTGCCGGACGTGATCTCACTGATTATCTTATGAAGATTCTCACAGAGAGAGGA
TATTCATTTGTTACAACTGCTGAACGAGAAATTGTCCGAGATATCAAAGAAAAGCTCTGT
TATGTTGCTCTGGACTTTGAACAAGAAATGGCGACTGCCGCCTCGTCTACTTCTCTTGAA
AAAAGTTACGAATTACCAGATGGTCAAGTTATTACAATTGGTAATGAAAGATTCCGATGC
CCTGAAACTCTTTTCCAACCATCCTTCATTGGAATGGAATCTGCTGGCATCCATGAAACG
ACATACAATTCAATTATGAAATGTGACATCGATATTCGCAAAGATCTATACGCCAACAAT
GTTCTATCAGGAGGAACCACTATGTATCCTGGTATTGCTGATCGTATGCAAAAAGAAATC
ACAGCCCTGGCTCCAAGTACAATGAAAATAAAAATCATTGCTCCTCCAGAACGAAAGTAT
TCGGTATGGATCGGAGGTTCCATTTTGGCATCTCTTTCGACCTTTCAACAAATGTGGATC
AGCAAACAAGAATATGACGAAGCTGGTCCATCAATCGTTCATAGAAAATGTTTCTAA

InterProScan

PANTHER
Actin (IPR004000) - T[5-377] 1.5E-265
Pfam
Actin (IPR004000) - T[7-378] 6.1E-148
SMART
Actin (IPR004000) - T[8-378] 1.8E-233
PRINTS
Actin (IPR004000) - T[29-38] 4.8E-57 - T[52-63] 4.8E-57 - T[64-86] 4.8E-57 - T[118-131] 4.8E-57 - T[143-162] 4.8E-57 - T[239-255] 4.8E-57
ProSitePatterns
Actin_CS (IPR004001) - T[56-66] . - T[359-367] .
ProSitePatterns
Actin/actin-like_CS (IPR020902) - T[107-119] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTA_HUMAN 97.326 % 766 0
ACTS_HUMAN 96.791 % 763 0
ACTC_HUMAN 97.326 % 766 0