- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S1.g14830.03.t
Possible name(s)
SCN2A; SCN5A; SCN9A
Gene model
Location
S1 [584,913 / 608,503]
>Harore.CG.MTP2014.S1.g14830.03.p
MHKVCLLLDYSRACKQSSRWFRTPSTIVDVHFRKKKKSMDNNSKDVVRHRVQYSDNMSIC
SRETLMENPADEQLNQPGTNIDLIGNEEEFAIDSESDQSVTSSAYYAAKKRARKTKRLHL
MQEHEEAKLKLHKRRRGQWPSDEITSRFGRLLGSLLGIWDTLFDEETFIVVNNDLTVFRF
SEAKSLFLFGKDSRIRQAAINLFIRPIFSHFIMLVILANCFCMVLAVPPFWVEAYLEYVF
TAIYCMEALIKIIARGFVLHRFSYLRDPWNWLDFIVIVFALITEVLKALVSEHVSQFSVL
RAFRVLRALKTMSVVPGLRAIVKALLRSIRALKDAIVLTIFCVSVFALIGYQLFHGTLRN
KCVLEPGNFDLAPDAMYVVDLLQRLPDGFKNESSESGNNADIRTFPAIGLYESCGSVSED
ISSLEKFENLAESLTWNEYDEHLTASLVNALNETRFNVSKTDKLLKSRDTSHVDSTIQST
VVPPLLFSDEPFRSSTEPNLSKSNCPKLYNECIVKDSYDVTTSSTSSLLQLATIMTYGSK
EEVFSRWDCYYDDDQTQTPTTREFGVSSSTFSYYSDSNIQYSETRPAKCSISVVAFSANI
SCMYSKLTLTEKVTFDNGTRNLTASDLPCQDNIWVRTMTYGETQVPFWETRKSIIFFTVQ
REEVKNASRVSKRDVKQRDVDASEDEGFFNDTMFLLFDQLSRKEMSKEEESDWNWEKAHY
LMTDTDSGQYFYLNSSNRPPSEPQYCILGDNAMCPSGYKCQEAGGNPDFGYTNFDQFFWA
FLTSFRLIAQDAWSRLYYLTLHTIGKTYVIYYIIIMFLGSYYLINLILAVVYMAYEEQQA
VSDEEEIIDAKEGAVAEEEILGSRTSLKSGPLESRHCDLITTSLTSITDSLPRSRYGGSR
RSRYGQRRTPKPDPVSDHLYHKFTLRHGDGISNENLENLSCDLESEEGKCHPWRWRSRRS
SYASDLSHTMSIRSVCTRCNSKDDLSHRLQFPSHGRRRCSRSMCEDSCSDLPMSTHVFNP
VVSNTTESGPTEKDGQISIPVPIILKQKYSKLDVLPVEYSRGRSNSVCSSISESGTFSIA
VPYYCQECRKKRKCRMSSSSSGQSTVLLDASSLRQKSESRDPNEDSTFLPIPIDRANRLS
SSSSASFDAEEQVVQAEISHTSHWLTPPSGGSIASSKNAELGSCNALSTLSQRRDSTLPT
YGMSLTSSPPLQVPCLLITSASSEHISSLSKEASESSLVNTDKLLKEKSPDLVCNTLEWG
VTHEEEIIPKKKLDVFLPGVSETGDSSCAAFKRRQWRDQINSFSNVENEEAPLCNIREVC
GEDLGSPTTMFSSRSQSQNFSQYDAAAAFRAVAFNEDVESYEMPLMDGVQNGETQHDQEL
QVVTHHECSEKKSRPFKRMVQHNYNGFKRAVTNVFCKWSCCPSCWQPFQANMKIFVLDPF
MDLFITLCILLNTLSMTIEQHPMEQWFQNMLEQANLAFTIIFALEMFLKIIGMGPHTYFK
ETWNLFDAVIVISSLLELLLQSIQGISVLRTFRLLRILKLAKSWPTLNKLLRIIGRTLGK
LWHLTIVFLLVLFIFAVVGMQLLREKYVEEYHDNMPRWNFVDFQHSFMVVFRIQCGEWIE
NMFACMNIAHPGICIPLFVLVYIIGNLVILNLFLALLLNSFCGDALQRIDSERNSIAEAM
VRIRRWSRKCRKFLRSCNVIMHCCNKIQLQLSLRKKTSCNEPKIKPIAMKKKMKNGNGST
DLPMDPASTGTTFLNEDVHSSNNTSKRDPDPDPVISCKAVDKQPGTHNENSTKPLNGDKP
VTTTLPDLLDNNNHTVQKNDTENENDDHGHHQHHHQQQHHHHHHSHSHHRSNTRRRNSRC
YIDHNSLRQGSDEKDSPCHKIHRPRNEEARHHKHHVVRCHGCNTQIMPKSPERRLPRRRI
KEGFAPASEFQNDTFNENKVDPSNRDDEETSPMIQQEDTNIPASRSRFPAYDSIEYTRTP
SCEREILGQKRSSKRNRKSKSVEESIDEVVGRSRNTKRDSWKQGQASSLPLSRKNSPIPA
PAMLDVSTAAGKLLKYKGAEESDVPLRGSVHSSRPPSIKNGSTANGGILRRKSTASVSVR
YHSGRASISSVKSNYSSIRSHKPLSNASSAAELGAAATEETETKEEIRECMPLCFNEPKD
GDWWKIRKFFYDVVNHPYFENLVIFCILLSSIALAFEDIHLNSRPTMKRVLEVLDIIFCI
FFTVEMLLKWIGHGLKYYFTNAWCLLDFVIVFVSLLNLSMSKSDLGSLRVLRTFRALRPL
RALSRFQGMKVVVDALMRAIPSIAHVFLVCVIVWLIFSILGVNLFAGRFGRCVLLTGDTG
IILPRPPDDANETFVSANINELCNPNITLPLRESQMPQIANKQNCTECGELTLIQWVIPS
INFDNVFQGLLALMQVATFKGWLEIMNNAIDIRGIEVQPSYEYSFHNYLYFCIFIVFGAF
FSLNLFIGVIIDNFNQQKVKCAGGEDGVFLTDEQRRYYNAMKKMAAKTPKKPIPRPTSRV
ANKIYDLVTSRKFEIIVMAMILLNMVVMALEHYDMSPRMDLILENFNFVFIGIFTVEAIL
KLIGLRQYYFTIPWNVFDIIVVVVSVIGKLIRRFVRGTGDLYCLKHNNSINNNITLFYCT
IFFVYSAKA
>Harore.CG.MTP2014.S1.g14830.03.t
ATGCATAAAGTATGTTTACTGCTAGACTACTCTAGGGCCTGTAAGCAAAGCAGTAGGTGG
TTTCGTACTCCAAGTACAATCGTAGATGTACATTTTCGCAAGAAAAAAAAATCAATGGAT
AACAACAGCAAGGACGTCGTTCGACACAGAGTGCAGTACTCGGATAATATGTCGATTTGC
AGCCGCGAAACGCTAATGGAAAACCCGGCAGACGAACAGCTCAATCAACCGGGGACCAAC
ATTGATTTGATCGGTAACGAAGAAGAATTTGCAATAGATTCGGAATCGGACCAGAGTGTC
ACGTCTAGCGCTTACTATGCGGCAAAGAAACGAGCGCGAAAAACGAAACGATTACATCTG
ATGCAGGAACATGAGGAAGCCAAGCTCAAGCTCCATAAACGCAGGAGGGGACAATGGCCT
TCTGATGAAATTACCTCTCGCTTTGGTCGCCTCCTCGGAAGTTTGTTGGGTATTTGGGAT
ACGTTGTTTGATGAAGAGACTTTCATCGTCGTCAACAATGATCTGACCGTTTTTCGATTC
AGCGAAGCCAAATCTCTTTTTCTCTTCGGTAAAGACAGTCGGATACGACAAGCAGCCATC
AATCTCTTCATCCGACCGATATTTTCTCATTTTATAATGCTGGTCATATTGGCCAACTGT
TTTTGTATGGTGCTCGCCGTGCCTCCGTTCTGGGTAGAAGCCTATCTCGAATACGTATTC
ACGGCGATATATTGCATGGAGGCGTTGATAAAAATCATTGCCCGTGGCTTCGTGCTCCAT
CGATTTTCTTATTTACGGGATCCCTGGAATTGGCTGGACTTCATAGTCATTGTGTTTGCG
TTAATTACCGAAGTTTTAAAGGCCCTCGTTTCCGAACATGTCAGTCAGTTTTCTGTTTTG
CGAGCCTTCCGAGTCCTGAGAGCGTTGAAGACGATGTCGGTTGTTCCAGGGTTAAGGGCG
ATCGTCAAAGCCCTACTTCGTTCTATACGCGCCTTGAAGGACGCGATCGTATTAACTATT
TTTTGCGTATCGGTGTTCGCGTTGATCGGATATCAACTTTTCCACGGAACTCTGCGAAAC
AAATGCGTTTTGGAACCGGGAAATTTCGACCTTGCTCCGGATGCCATGTACGTTGTGGAT
TTACTACAGAGACTGCCAGATGGATTTAAAAATGAATCTTCCGAATCTGGCAATAACGCT
GATATACGAACGTTTCCGGCAATCGGGCTGTACGAAAGCTGTGGTTCCGTGTCAGAAGAC
ATTTCATCGTTGGAAAAATTTGAAAATTTAGCAGAATCATTAACTTGGAACGAGTATGAT
GAACATTTGACTGCTTCTCTAGTAAATGCTCTCAACGAAACACGGTTCAACGTTTCTAAA
ACAGATAAACTCTTAAAATCACGTGATACGAGTCATGTGGATTCCACGATCCAATCAACG
GTCGTTCCTCCTCTGCTATTTTCCGATGAACCATTTCGCAGTTCAACAGAACCAAATCTT
AGTAAATCGAATTGTCCAAAATTATATAACGAGTGCATTGTCAAAGACTCATATGACGTA
ACGACATCTTCTACGTCATCACTGCTGCAACTGGCTACTATTATGACCTACGGTTCGAAA
GAGGAGGTGTTCAGTCGTTGGGATTGTTATTACGATGATGACCAGACGCAAACGCCCACA
ACTCGAGAGTTCGGTGTTTCTTCCAGCACTTTTTCTTATTATTCCGATTCTAATATTCAG
TATTCAGAAACGAGGCCTGCCAAATGCTCAATTTCAGTGGTGGCATTTTCCGCTAACATT
TCTTGCATGTATTCCAAACTGACACTGACTGAAAAGGTCACCTTTGATAACGGTACCAGA
AATCTTACGGCCTCAGATCTGCCATGTCAAGATAACATTTGGGTCAGGACTATGACCTAC
GGCGAAACGCAAGTCCCGTTTTGGGAAACCCGCAAAAGCATAATTTTTTTCACTGTGCAA
CGGGAAGAAGTAAAGAACGCCTCACGTGTAAGCAAACGTGATGTTAAACAACGGGACGTG
GATGCGTCTGAAGACGAGGGATTCTTCAACGACACCATGTTCCTGCTGTTCGATCAGTTG
TCCAGAAAAGAGATGTCAAAAGAGGAGGAATCCGACTGGAACTGGGAGAAGGCACACTAT
CTCATGACGGACACCGACTCGGGCCAATATTTCTACTTGAATTCGTCCAACAGGCCTCCG
AGCGAGCCGCAATATTGCATTTTAGGAGATAATGCTATGTGCCCGAGCGGTTACAAGTGC
CAAGAAGCAGGCGGCAACCCGGATTTCGGCTACACCAATTTCGACCAGTTCTTTTGGGCC
TTCCTCACGTCGTTTCGTTTAATTGCGCAGGATGCGTGGAGCAGACTTTATTACCTGACG
CTTCACACGATCGGAAAGACATACGTCATCTACTACATCATTATCATGTTTCTCGGATCC
TACTATCTCATAAACCTCATACTGGCTGTCGTTTATATGGCGTATGAAGAACAACAAGCC
GTTTCGGACGAAGAGGAGATAATCGATGCTAAAGAGGGAGCTGTTGCAGAGGAGGAAATT
CTTGGGAGCAGAACGAGTTTGAAAAGCGGACCGCTGGAGAGTCGCCATTGTGACCTTATA
ACGACATCTCTCACTTCAATCACCGATTCCTTACCCCGGAGTCGATACGGAGGGAGTAGG
AGGTCTAGATATGGCCAACGGAGGACTCCAAAACCAGATCCAGTATCAGATCACTTGTAT
CATAAATTTACTCTTCGACATGGGGATGGGATATCTAATGAAAATCTAGAAAATCTTTCG
TGCGATTTGGAATCGGAGGAAGGGAAATGTCATCCCTGGAGATGGAGGAGCAGGAGGAGT
TCCTATGCCAGTGATCTCTCACACACTATGTCGATACGTAGCGTATGCACGCGCTGTAAT
TCAAAGGATGATCTAAGTCACCGATTGCAGTTCCCTTCACATGGTCGAAGGAGATGCAGT
CGAAGCATGTGCGAGGATTCCTGTTCTGACCTTCCTATGTCAACTCATGTATTCAATCCC
GTGGTTTCGAACACTACGGAATCAGGACCCACAGAAAAAGATGGTCAGATCTCTATTCCA
GTTCCTATAATACTGAAGCAAAAGTATTCAAAATTGGACGTGTTACCGGTTGAATATTCT
CGAGGGAGATCCAATTCCGTGTGCAGTTCCATCAGCGAAAGCGGTACATTTAGCATTGCC
GTGCCATACTACTGCCAGGAGTGTAGGAAAAAGCGAAAGTGTAGAATGTCTAGTTCATCT
TCAGGACAAAGCACTGTCTTGTTGGATGCTTCTTCTTTGCGTCAGAAATCAGAATCCAGA
GATCCTAACGAAGACTCGACCTTCTTGCCAATACCCATTGATCGGGCAAATCGTCTGAGT
TCTTCCTCATCTGCTAGCTTCGATGCCGAGGAGCAGGTTGTGCAAGCGGAAATATCTCAC
ACTTCTCACTGGCTCACACCACCATCCGGTGGTTCCATCGCCTCAAGCAAAAATGCTGAA
TTAGGATCGTGTAACGCGTTATCAACCTTGTCCCAACGTAGAGATTCTACTCTGCCCACC
TATGGCATGTCTCTAACCAGTTCTCCACCTCTTCAAGTTCCTTGTCTCCTAATAACCTCC
GCATCTTCGGAGCACATTTCGAGCTTGTCAAAGGAAGCTTCGGAATCTAGTCTTGTCAAC
ACTGATAAACTTTTGAAGGAAAAGTCCCCTGATCTGGTTTGTAACACACTGGAATGGGGG
GTAACACACGAGGAAGAAATCATACCCAAAAAAAAACTGGACGTATTTTTACCTGGCGTC
AGTGAGACAGGTGACAGCAGTTGTGCTGCGTTTAAGAGACGTCAGTGGCGAGATCAGATA
AATAGTTTCTCAAATGTGGAGAATGAAGAAGCTCCCTTGTGTAACATTAGAGAAGTTTGC
GGCGAAGACTTAGGATCACCGACCACGATGTTCTCCAGTCGAAGCCAGTCTCAAAACTTC
AGTCAATATGATGCAGCTGCTGCCTTTCGGGCTGTTGCATTTAATGAAGATGTAGAATCT
TATGAGATGCCTTTAATGGACGGAGTTCAAAATGGAGAAACGCAACACGATCAAGAATTA
CAAGTTGTTACTCATCACGAATGCTCAGAAAAGAAAAGCAGACCTTTCAAACGCATGGTT
CAGCATAACTACAACGGTTTTAAACGAGCTGTTACAAATGTCTTCTGCAAATGGAGCTGT
TGTCCGAGTTGCTGGCAGCCTTTTCAAGCCAATATGAAAATATTTGTATTAGATCCTTTC
ATGGATCTGTTCATAACATTATGCATCTTGTTAAACACTCTATCCATGACAATAGAGCAG
CATCCTATGGAGCAATGGTTCCAGAACATGTTAGAGCAAGCTAATTTGGCATTCACGATC
ATATTCGCGCTCGAGATGTTTCTGAAGATCATTGGTATGGGACCTCATACGTATTTTAAA
GAAACATGGAACCTGTTTGACGCTGTGATCGTAATATCTAGTCTACTGGAGCTTTTGTTG
CAGTCGATTCAAGGGATTTCTGTCTTGAGAACCTTTCGATTGCTAAGAATTCTTAAGCTT
GCTAAATCGTGGCCAACGCTTAACAAGTTGTTACGAATCATTGGTCGAACCTTAGGGAAG
CTCTGGCATTTGACGATAGTGTTTCTGCTTGTGCTTTTCATATTTGCTGTCGTAGGAATG
CAGTTACTCAGAGAAAAATACGTGGAAGAATATCATGACAACATGCCAAGGTGGAACTTT
GTTGACTTTCAGCATTCGTTCATGGTTGTGTTTCGTATCCAATGTGGAGAATGGATCGAG
AATATGTTCGCGTGTATGAACATTGCTCACCCTGGCATATGCATACCGCTATTCGTTCTC
GTTTATATTATTGGAAACCTGGTGATATTGAATTTATTTTTGGCGCTCTTGCTAAATTCT
TTTTGCGGTGACGCACTCCAGAGAATTGACAGCGAAAGGAACAGTATAGCTGAGGCCATG
GTCAGGATAAGAAGGTGGTCAAGGAAGTGTCGTAAATTCCTGCGTTCTTGTAATGTCATA
ATGCATTGCTGCAACAAAATACAGCTGCAGCTATCGCTGAGAAAAAAGACATCGTGCAAC
GAGCCAAAAATAAAACCCATCGCAATGAAGAAGAAGATGAAAAACGGGAATGGTTCGACT
GACTTGCCTATGGATCCGGCATCTACTGGAACTACTTTCTTAAACGAGGACGTGCATTCC
TCGAATAATACCTCCAAGAGAGATCCTGATCCTGATCCTGTCATCAGTTGCAAAGCTGTT
GACAAGCAGCCTGGTACTCACAATGAAAATTCAACCAAACCACTCAATGGTGACAAACCT
GTGACTACTACTTTGCCTGATTTACTGGACAATAATAATCATACTGTACAGAAGAACGAT
ACTGAAAACGAAAATGATGATCATGGGCACCACCAGCACCACCATCAACAACAACACCAT
CACCACCATCACTCACACAGTCATCATCGCAGTAACACACGAAGACGAAACAGCAGGTGC
TACATAGATCATAATTCCCTTCGACAAGGATCAGATGAAAAAGACTCTCCATGCCACAAA
ATACACAGACCCAGGAATGAGGAAGCAAGGCATCACAAACACCATGTCGTCCGGTGTCAT
GGATGCAACACACAAATAATGCCTAAGTCCCCCGAGCGAAGGCTGCCCAGGAGACGAATA
AAAGAGGGATTCGCCCCGGCTTCCGAATTTCAAAACGATACATTCAATGAAAACAAAGTT
GACCCTTCAAACAGGGACGACGAAGAGACTTCACCCATGATCCAGCAAGAGGACACTAAC
ATACCTGCATCCCGTTCCAGGTTCCCGGCTTACGACAGCATCGAATATACTAGAACTCCC
TCTTGCGAACGAGAAATACTTGGCCAGAAACGCAGCAGCAAGCGAAACCGAAAATCGAAG
AGTGTTGAAGAAAGTATAGATGAAGTAGTTGGTCGTTCTAGAAATACTAAACGAGATAGC
TGGAAACAGGGGCAAGCCTCGTCATTGCCGTTATCGAGGAAGAACTCCCCGATCCCTGCT
CCAGCCATGCTTGACGTATCGACTGCTGCAGGAAAATTACTAAAGTATAAAGGTGCAGAA
GAAAGCGACGTACCCCTACGCGGTTCCGTTCACAGCAGCCGGCCCCCAAGCATCAAAAAT
GGCAGCACAGCGAACGGGGGAATCCTACGTCGAAAGAGCACTGCCAGCGTTTCAGTGCGA
TATCATTCGGGAAGAGCAAGTATAAGCAGCGTCAAATCAAATTACTCATCTATTAGGAGT
CACAAGCCACTGAGCAATGCCTCAAGTGCTGCTGAACTAGGAGCAGCAGCGACAGAAGAA
ACTGAAACGAAGGAAGAAATACGAGAATGCATGCCACTGTGTTTCAACGAACCGAAGGAC
GGAGATTGGTGGAAAATAAGAAAGTTTTTTTATGATGTGGTGAACCATCCTTATTTTGAA
AACCTCGTCATATTCTGTATCTTGTTAAGCAGTATTGCACTGGCCTTTGAAGACATCCAT
TTGAATTCACGTCCCACCATGAAGAGGGTTCTGGAAGTACTGGACATCATTTTCTGCATT
TTTTTCACCGTCGAGATGTTGCTGAAGTGGATTGGTCACGGTCTCAAATATTACTTCACC
AACGCTTGGTGTCTACTCGATTTTGTTATTGTTTTTGTTTCATTGTTGAACTTATCAATG
TCTAAGAGCGACTTGGGATCATTACGAGTACTTCGAACATTCAGGGCACTCAGGCCTCTA
AGGGCTTTGTCTAGATTTCAAGGAATGAAGGTTGTGGTCGACGCTTTAATGCGAGCTATA
CCTTCGATAGCGCACGTATTTTTGGTCTGTGTGATAGTATGGCTGATTTTCAGTATTCTC
GGCGTCAATCTTTTCGCCGGTCGATTCGGTCGTTGCGTCTTGTTAACCGGTGACACCGGA
ATAATCCTGCCTCGTCCTCCCGACGACGCGAACGAAACTTTTGTGTCAGCTAATATAAAC
GAGTTGTGTAATCCAAACATCACTTTGCCTCTACGGGAATCACAAATGCCGCAAATCGCC
AATAAACAAAATTGCACGGAATGTGGAGAACTGACACTGATTCAGTGGGTCATACCAAGC
ATCAACTTTGACAACGTTTTTCAAGGATTACTCGCTCTCATGCAGGTTGCGACATTCAAA
GGATGGCTGGAAATTATGAACAACGCGATAGATATCCGAGGAATTGAGGTACAACCATCG
TACGAATACTCTTTCCACAACTATCTTTATTTCTGCATATTCATCGTGTTCGGTGCTTTT
TTCTCACTCAATCTCTTCATCGGTGTCATTATAGACAATTTCAATCAGCAGAAGGTGAAG
TGCGCAGGCGGTGAAGATGGCGTATTCTTGACTGATGAACAAAGACGATATTATAACGCT
ATGAAAAAAATGGCCGCGAAGACTCCGAAGAAGCCCATACCGAGGCCAACATCTCGTGTG
GCAAATAAGATCTACGACCTCGTCACAAGTAGAAAATTTGAAATCATAGTCATGGCGATG
ATTCTCCTCAACATGGTGGTGATGGCACTCGAACATTACGACATGAGTCCGAGAATGGAT
CTGATACTGGAAAATTTTAATTTCGTTTTCATAGGTATATTCACTGTTGAAGCTATTTTG
AAGTTGATCGGACTTCGTCAATATTACTTTACGATACCTTGGAACGTCTTTGACATAATT
GTCGTTGTTGTGTCAGTTATAGGTAAGTTAATTCGCCGCTTCGTCAGAGGCACTGGTGAT
TTATATTGTTTGAAACATAACAACTCGATCAATAATAATATTACGCTATTTTACTGTACT
ATATTTTTTGTGTACTCGGCCAAAGCATGA
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
SCN2A_HUMAN | 46.704 % | 463 | 2.32E-132 |
SCN3A_HUMAN | 48.276 % | 464 | 1.07E-132 |
SCN5A_HUMAN | 49.485 % | 470 | 1.35E-134 |