- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Cisavi.CG.ENS81.R132...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S200.g09302.01.t
Possible name(s)
CFAP57; USO1
Gene model
Location
S200 [74,997 / 83,934]
Amino acid sequence
Length: 1,003
>Harore.CG.MTP2014.S200.g09302.01.p
MITSSEDVLFLQTSAEKMNYLKSFVKGSEEAPSGAETVARICDRVSSSTLLEDRRDAVRA
LKSLSKKFRYEVGTQAMPHLTNVLESDSNDDEIISYALDTLCNLTSTEADGDGESVPQPE
LTSAFVDNLIADEKNVAIVLDLIERYDFSVRLAAVRLLTSLLRCQTNQVQQIVLTKPMGI
PRLIDLLTDSREVIRNDALLILIELTRGNSNIQKIIAFESGFETILNIIRNEGLSDGGVV
VEDCLLLLLHLLNRNTSNQQLFKEGSLVQQLAPFFEIDSNAVWSAQKVANLHLMIKVIRT
LVSPSNPSNVTSSCQMVMQSCGLLKRLCDMLMATGVPADILTETINAVSEVIRGCATNQA
LFESVYAPCEPPRPAIVVLLMSMVNDKQPFELRCAVLYCFQCFLHGNPSGQTKIVNTLLP
SSLEPHEISAGQLLCGGLFAAADSLSNWCSAVALSHALHKNLEMKQQLLRVQLATSVGHP
PISLLQQITNIVRQSTSLQTRMGLLILLCSWMSGCPVAVCHFLHDPSAIPFLLSQIGEHG
NELDLLLHGVCSLLLGICIADNDGSVPQRTKESLIELIVARVGLERFCDSLACVTKHDLY
SKAFQRSQPVGDSASNMLFDHNFTKLFKNLEDTIVKMVSNLDDVKKEEESKAAIKAHDSI
VSEYKTLIRNQDSELTELRATVGALREELALSNEQVESSETQIQQLKDQYNLLKVTKGVA
MTEGGDAVSGEIVTTLTVQIDKLKQENTAKSKLLSEKEDIIQQLRNDLNELEIRALQLSS
SDERQQNDQQLSDNTNVPDDSIAANLTRANMPDDSRLQEHRLSQLNIEIDNLRAQLLEKD
AEIQRNLEESGTKNVTDDVYDALLAEKIAMQTKTHELEARLSESNEENSRLKERISQMSA
EVLSKQGESDALRKEQSESEDLTEKLQSQVENVKREQEDLLILLSDQDVKLDNYKKQLRE
LGQEVSEDEDDYQENDEDIEEVPKINSEDVKDALNGLDNGTAK
Nucleotide sequence
Length: 3,012
>Harore.CG.MTP2014.S200.g09302.01.t
ATGATAACCAGCTCGGAGGACGTTTTGTTTCTTCAGACATCAGCTGAAAAGATGAATTAT
TTGAAATCATTTGTAAAGGGCAGTGAAGAAGCACCAAGCGGAGCAGAAACGGTCGCTCGT
ATCTGTGATAGAGTTTCTTCGTCGACACTTTTAGAAGATAGACGGGATGCGGTCAGGGCA
TTGAAATCTTTATCAAAAAAATTTCGCTATGAAGTTGGCACACAAGCGATGCCTCATTTG
ACAAATGTTCTTGAATCAGATTCCAATGATGATGAAATCATATCATATGCCCTTGATACC
TTGTGCAATTTAACTTCTACAGAAGCTGACGGAGATGGTGAATCTGTACCTCAGCCCGAA
TTGACATCTGCTTTTGTCGATAATTTAATTGCTGATGAGAAAAATGTCGCCATCGTGCTG
GATCTCATTGAGCGTTACGATTTTTCTGTACGTCTTGCCGCAGTTCGTTTATTAACCTCG
TTGTTGAGGTGCCAAACTAATCAAGTACAACAGATCGTCCTGACCAAACCTATGGGCATA
CCTCGTCTCATTGATCTTCTGACAGACAGTCGTGAAGTCATCAGGAACGATGCCCTCCTC
ATTCTCATCGAACTCACCAGAGGCAATTCCAATATCCAAAAAATAATCGCGTTCGAGAGT
GGATTTGAAACCATACTCAATATCATACGTAACGAAGGTCTGAGTGATGGAGGCGTGGTT
GTAGAAGACTGTCTACTACTTTTATTACATCTTCTTAACAGAAACACATCAAATCAACAG
TTATTCAAGGAAGGTTCTTTAGTTCAACAGCTGGCACCGTTCTTTGAAATAGATTCAAAT
GCTGTTTGGTCTGCACAGAAAGTAGCCAATCTTCATCTGATGATCAAGGTGATCAGAACA
CTAGTGTCTCCGTCAAATCCCTCAAATGTAACTTCTTCATGCCAGATGGTGATGCAGAGC
TGCGGTCTGCTGAAAAGGCTTTGCGACATGTTGATGGCCACAGGCGTTCCTGCTGATATT
TTGACAGAGACAATAAACGCTGTATCTGAAGTCATAAGAGGATGCGCGACCAACCAAGCA
TTGTTTGAGTCAGTGTATGCGCCATGCGAACCTCCTCGACCGGCCATTGTTGTTTTGCTC
ATGTCCATGGTTAATGACAAGCAACCATTTGAATTACGTTGTGCAGTTCTGTATTGTTTT
CAGTGTTTCCTTCATGGGAATCCAAGCGGCCAAACAAAAATTGTTAATACTCTACTGCCA
TCCTCCCTGGAACCACATGAAATTTCAGCCGGTCAACTCCTCTGTGGCGGATTGTTTGCT
GCAGCCGATTCACTTTCCAATTGGTGTTCTGCAGTGGCACTTTCCCATGCCCTTCACAAG
AACTTGGAAATGAAACAACAGCTATTGAGAGTACAACTTGCCACAAGTGTCGGCCACCCT
CCCATATCCCTATTGCAACAGATTACAAATATAGTCAGACAGTCCACTAGCCTACAGACC
AGAATGGGTCTCCTGATACTGCTTTGCAGTTGGATGTCCGGGTGCCCCGTTGCTGTGTGC
CATTTCCTTCACGATCCGTCTGCCATACCATTTTTATTAAGTCAGATTGGAGAGCATGGC
AATGAGCTCGACCTCCTGCTCCACGGAGTTTGTTCACTACTCCTAGGAATTTGCATTGCT
GACAATGATGGTTCCGTGCCGCAGCGAACCAAGGAATCTCTCATTGAGCTCATAGTAGCC
AGAGTCGGACTAGAAAGATTTTGCGATTCGTTGGCCTGTGTGACCAAACACGATCTGTAT
TCCAAAGCTTTCCAACGTTCTCAGCCGGTCGGTGACTCTGCAAGCAACATGCTTTTTGAT
CATAATTTTACCAAACTTTTTAAGAATCTTGAAGATACCATAGTAAAAATGGTTTCAAAT
CTTGACGATGTTAAAAAGGAAGAAGAGTCGAAAGCAGCAATTAAGGCCCATGACTCAATA
GTTAGCGAATACAAAACGCTAATACGAAATCAGGATTCAGAGCTAACAGAACTTCGTGCC
ACAGTTGGCGCATTAAGAGAAGAGTTGGCTCTGTCTAACGAACAAGTTGAATCCAGTGAG
ACCCAGATCCAGCAATTAAAAGACCAGTATAACCTCTTAAAGGTTACTAAGGGAGTTGCC
ATGACCGAAGGAGGAGACGCAGTTTCAGGAGAAATTGTCACCACTTTGACTGTCCAAATA
GATAAATTGAAACAAGAGAACACAGCGAAATCAAAGTTACTATCTGAGAAAGAAGATATC
ATACAGCAACTGCGTAATGATCTCAATGAGCTTGAAATTCGTGCTCTGCAACTGTCCTCA
TCTGACGAGCGGCAACAGAATGATCAGCAACTGTCAGACAACACTAACGTGCCAGACGAC
TCCATCGCTGCAAATTTGACTAGGGCAAATATGCCTGACGATTCCCGGTTGCAAGAACAC
AGGCTGTCTCAATTGAATATCGAAATTGATAATTTACGAGCACAACTTTTGGAAAAAGAT
GCAGAAATCCAACGAAATCTTGAAGAAAGTGGCACAAAGAATGTCACAGATGACGTCTAT
GACGCTCTACTCGCAGAGAAAATTGCAATGCAAACAAAAACACACGAGCTCGAAGCGAGA
TTGTCAGAAAGTAATGAAGAAAATTCGAGGCTGAAAGAAAGAATTTCTCAGATGAGTGCT
GAGGTTTTGTCGAAGCAGGGCGAGTCGGATGCCCTTAGGAAAGAGCAATCTGAATCTGAA
GACTTGACGGAAAAACTCCAGTCCCAGGTCGAGAACGTGAAGCGGGAGCAGGAGGACCTC
CTCATTCTGCTCTCGGATCAGGATGTTAAACTGGATAACTATAAAAAGCAGCTGAGGGAG
CTTGGGCAGGAGGTGTCAGAGGATGAGGATGATTACCAGGAGAATGATGAAGATATAGAA
GAAGTGCCTAAAATCAATTCAGAAGATGTGAAAGATGCTCTGAATGGGCTCGATAACGGA
ACAGCTAAATAA
| Gene3D |
ARM-like (IPR011989) - T[33-642] 2.0E-221 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[41-462] 1.52E-25 - T[494-558] 1.52E-25 |
| SMART |
Armadillo (IPR000225) - T[62-106] 0.3 - T[167-207] 77.0 - T[311-353] 39.0 |
| ProSiteProfiles |
Armadillo (IPR000225) - T[75-110] 10.762 |
| Pfam |
Vesicle_Uso1_P115_head (IPR006953) - T[359-636] 1.0E-52 |
| Pfam |
Uso1_p115_C (IPR006955) - T[873-981] 7.2E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| USO1_HUMAN | 48.668 % | 827 | 0 |