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- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S206.g09286.01.t
Possible name(s)
GDPD1; GDPD4; GPCPD1
Gene model
Location
S206 [118,976 / 120,946]
Amino acid sequence
Length: 583
>Harore.CG.MTP2014.S206.g09286.01.p
MYSVKFSVTASVKDDEFVGLVGSNQELGNWKLQNSKILTNDSTSKIWKIEIKFSKQEKVQ
YRYFIGQLTENGMQQRYIVHRWECHMKGRWFEAKDGMEISDKFGIVDCIEKVDQGWLCGQ
TEVNINVSEVNGVPCFNWIKKDADLRIEDLKISCTVEGAIKSEMTFLSPYSAKHFDLNCS
VNMPHGKENYFSYAIQVLKLEDLTVKFDIFNSRDNLLGQGWVLGSLLEGSIGVRKLVVTG
IDGRPIGILRIEYVVIRPYRNEKMTLEETYSLHWKPRETLHIGHRGAGNSFTAETVSNLH
ENTISSFLKASEHGAAMIEFDVQLTKDKIPIIYHDLNLCVAIGQDANLHEVQIQSMTYDE
LKKYNLRHKSRKNSNRELKITEWDSRPFHKPFPTLEETFKEVPLHTGFNVEVKWPNLYVD
GSWDDDVNAEHYFDINEFLDKILDVVFDHAGKRRVVFSSFCANLVAILRRKQNRYPVLFL
NNGETGHYRLYEEPRAQLNSMAAAFAMSQKLLGLVTLERDVYADHSQVKKMHDHGLKLLV
YGGEVHKPENIKLLTDLSLDGIIYDMIHEVLPPGKNIFQKNIE
Nucleotide sequence
Length: 1,752
>Harore.CG.MTP2014.S206.g09286.01.t
ATGTATTCCGTTAAATTTTCCGTAACTGCATCAGTCAAGGATGATGAATTTGTTGGGCTT
GTGGGAAGCAACCAAGAACTTGGAAACTGGAAGCTTCAAAACTCCAAGATTCTAACTAAT
GATTCAACGAGCAAGATTTGGAAAATCGAAATAAAGTTTTCCAAGCAAGAGAAAGTTCAG
TATCGTTATTTCATCGGGCAACTCACTGAGAATGGAATGCAGCAAAGATATATCGTCCAC
AGATGGGAGTGTCATATGAAGGGAAGATGGTTTGAGGCAAAAGACGGGATGGAGATAAGT
GACAAATTTGGAATAGTCGATTGCATAGAGAAAGTGGATCAAGGATGGCTCTGTGGTCAA
ACGGAAGTCAATATTAATGTTAGTGAGGTTAATGGTGTACCCTGTTTTAATTGGATAAAA
AAAGACGCTGATTTGAGAATTGAGGACTTGAAAATTTCCTGCACTGTTGAGGGTGCAATT
AAGAGCGAGATGACCTTTCTTTCTCCGTATTCTGCGAAGCATTTCGACCTTAATTGTTCA
GTAAACATGCCACATGGAAAGGAGAATTATTTCTCTTATGCAATTCAAGTGTTGAAATTA
GAAGATCTGACAGTTAAATTTGATATTTTCAACTCCAGGGATAATTTGCTGGGCCAGGGC
TGGGTTCTGGGAAGCCTTTTGGAAGGAAGTATTGGTGTCAGGAAATTAGTTGTGACTGGA
ATAGATGGAAGACCGATCGGAATCTTGAGAATAGAGTATGTCGTTATCAGGCCGTACAGA
AACGAGAAAATGACACTGGAAGAGACCTATTCCCTTCATTGGAAACCGAGAGAGACCTTA
CATATCGGACACAGAGGAGCGGGGAATTCTTTCACGGCAGAAACAGTTTCAAATCTGCAT
GAAAACACAATTTCTTCGTTCCTTAAAGCTTCCGAACACGGTGCTGCGATGATCGAGTTT
GACGTCCAGTTGACGAAAGATAAGATACCAATCATCTATCACGATCTCAATCTCTGTGTG
GCGATCGGACAGGATGCTAATCTTCACGAAGTTCAGATTCAAAGCATGACCTACGACGAG
CTGAAGAAATATAACCTTCGACACAAATCGAGAAAAAATAGCAACAGGGAACTGAAAATC
ACGGAGTGGGACTCGCGTCCCTTTCACAAACCATTTCCGACCTTGGAAGAAACCTTTAAA
GAGGTGCCCCTGCATACTGGATTCAATGTTGAAGTCAAGTGGCCAAACTTGTACGTGGAT
GGGTCTTGGGATGATGATGTAAATGCAGAACATTATTTTGATATCAATGAATTTCTGGAC
AAGATACTGGATGTGGTTTTCGACCACGCTGGAAAAAGGAGGGTGGTGTTTTCTAGTTTC
TGTGCAAACCTGGTTGCAATTCTCAGAAGAAAGCAGAATCGTTACCCCGTACTGTTTTTA
AACAACGGGGAAACCGGGCATTACCGATTATATGAGGAACCAAGAGCTCAGCTTAATAGC
ATGGCGGCTGCTTTCGCCATGTCGCAGAAACTCCTTGGTCTTGTCACGCTAGAACGGGAT
GTGTACGCCGACCATTCCCAAGTCAAGAAAATGCACGACCACGGTCTAAAATTATTAGTG
TATGGCGGCGAAGTGCACAAGCCTGAAAACATCAAGCTTCTTACAGATTTGTCATTGGAT
GGGATAATATATGACATGATCCATGAGGTGTTACCTCCGGGGAAAAATATATTTCAAAAA
AATATTGAATGA
| Gene3D |
Ig-like_fold (IPR013783) - T[1-115] 1.3E-25 |
| SMART |
CBM_fam20 (IPR002044) - T[1-101] 1.5E-11 |
| ProSiteProfiles |
CBM_fam20 (IPR002044) - T[1-115] 10.214 |
| SUPERFAMILY |
Carb-bd-like_fold (IPR013784) - T[2-96] 7.36E-13 |
| Pfam |
CBM_fam20 (IPR002044) - T[3-85] 7.1E-12 |
| PANTHER |
Gde1 (IPR033506) - T[8-581] 7.5E-123 |
| Gene3D |
PLC-like_Pdiesterase_TIM-brl (IPR017946) - T[276-572] 2.4E-49 |
| SUPERFAMILY |
PLC-like_Pdiesterase_TIM-brl (IPR017946) - T[279-570] 3.4E-46 |
| ProSiteProfiles |
GP_PDE_dom (IPR030395) - T[279-574] 49.1 |
| Pfam |
GP_PDE_dom (IPR030395) - T[284-567] 6.5E-55 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GPCP1_HUMAN | 32.643 % | 340 | 1.01E-108 |