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Transcript Model
Transcript Id
Harore.CG.MTP2014.S208.g09216.01.t
Possible name(s)
RPS11
Gene model
Location
S208 [30,922 / 31,979]
Amino acid sequence
Length: 177
>Harore.CG.MTP2014.S208.g09216.01.p
MLNDNCVNRQHRITHKPQRQNITFQTERAFQKQPIVFLNKKRVLGVTGKQKRLRHVRSVG
LGFKTPREAAEGNYIDKKCPFTGNVKIRGRILTGVVRKLKMQRTIVIRRDYLHYIKKYNR
YEKRHKNISVHLSPCFRDVQPGDIATVGECRPLSKTVRFNVLKVTKASGSKKQFQKF
Nucleotide sequence
Length: 570
>Harore.CG.MTP2014.S208.g09216.01.t
ATGTTGAATGATAACTGCGTCAACAGACAACACAGGATCACACACAAGCCACAGCGGCAA
AATATTACTTTTCAGACCGAGAGGGCTTTTCAGAAGCAGCCGATAGTATTTCTGAACAAG
AAAAGAGTTCTTGGAGTTACTGGCAAGCAAAAAAGACTTCGTCATGTAAGAAGCGTTGGC
CTTGGATTTAAAACCCCTCGTGAGGCTGCAGAAGGGAACTACATTGATAAGAAATGCCCT
TTCACCGGCAATGTGAAAATACGAGGAAGAATCTTGACAGGGGTCGTCAGGAAACTGAAG
ATGCAGAGAACTATCGTTATAAGACGGGATTACCTTCATTACATTAAGAAATACAACAGA
TATGAGAAGAGACACAAAAATATCTCCGTTCACTTGTCTCCATGTTTCAGGGACGTCCAG
CCAGGGGATATCGCCACCGTCGGAGAATGTCGTCCACTCAGCAAGACCGTGCGATTCAAC
GTTCTCAAAGTCACCAAGGCTTCAGGGTCCAAAAAACAATTTCAGAAATTCTAAACAACT
TGTGTATGATGCCTAATAAAATCATCTGAC
| Pfam |
Ribosomal_S11_N (IPR032440) - T[25-92] 9.1E-32 |
| PANTHER |
Ribosomal_S17/S11 (IPR000266) - T[25-177] 4.7E-72 |
| TIGRFAM |
Ribosomal_S17_arc-typ (IPR028333) - T[74-164] 1.6E-33 |
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[88-169] 4.28E-28 |
| ProDom |
Ribosomal_S17/S11 (IPR000266) - T[90-159] 2.0E-31 |
| Pfam |
Ribosomal_S17/S11 (IPR000266) - T[94-163] 1.2E-26 |
| PRINTS |
Ribosomal_S17/S11 (IPR000266) - T[108-131] 1.4E-12 - T[142-152] 1.4E-12 - T[152-159] 1.4E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS11_HUMAN | 81.818 % | 261 | 1.34E-90 |