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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R37....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  3. EST 'AHC0AAA224YN02_RM1' > 
  4. Clone 'cien187803' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g49678.01.t

Possible name(s)

KPNB1; TNPO1; TNPO2

Gene model

Boschl.CG.Botznik2013.chrUn.g49678

Location

chrUn [307,342,465 / 307,356,630]

Sequences

Amino acid sequence

Length: 870

>Boschl.CG.Botznik2013.chrUn.g49678.01.p
MASLVAILDKTVSPDPEELKQAQAYLEQAAGANLSNFLVSLCQVLAAPTNSEVSRMAAGL
QIKNYLTAKDLKVKEEYQQRWLMLEDGPRAEIKKLVLQALGTETSKPSSAPQVIASIACA
EMPFGHWKDLIPQLVQSVTAEQSTEHLKEAALEAIGYICADMDQQHLEAHSNEILTAIVQ
GMRKQEPSVQVKLAATNAMLNSLEFTRGNFEKESERHFIMQVICEATQVEDTRGETNSIR
VAALQCLVKIMSLYYQYMEAYMGPALFAISVEAMKSDDENVSLQGIEFWSNVCDEELDLA
IEMTEAAEAGQPPSRTSKFYAKGALQYLVPILTTILTRQDEKDDDDEWNPTKAAGVCLML
LATCCENDIVPHVVPFIKDNILNPDWRCRDAAVMSLGSIVEGPTSDVLCPILEQGMETFI
QLLKDDSVVVRDTTAWAIGRICNVTPEIVINEKYLMPLLSAMVENLDAEPRVAANICWAL
SSLAESAYDHASGESDEDPATYAMSNVYEKIIEKLLNTTDRTDGHMNNLRGSAYEAIMEM
IKNSPADCYETVLKTTNVVMERINQLIQMESRIQSSSDRSQFNDLQSLLCATLQSVLQKV
KAEHVESIADNIMASLLHMLSSGSGSVHEDIMLTVESFIEVVGANFINYLPAFKNFLFPA
LRNSTEYQVCIVAVGVVGEICRAIGAKIGPYCDLIMSSLLEDLSDPSVHRSVKPHILSVF
GDIALAIGPEFKKYVEVVLQTLQQAAQARVDMIFSYHDAVALLCGSDNITWSVMRTHHKS
TIRFTSVNTRVINRYMSAPKKKRINWSLTTLPPTLRFPQNHAFSLIKQNDYDMIDYLNEL
REGCLESYTGIIQGLKGDQPEPNRNVFEVS

Nucleotide sequence

Length: 2,613

>Boschl.CG.Botznik2013.chrUn.g49678.01.t
AATGGCGTCACTTGTAGCAATTTTAGACAAGACTGTATCACCAGATCCAGAGGAGCTGAA
GCAAGCGCAAGCATATCTAGAGCAAGCGGCCGGTGCTAACTTGTCCAACTTCCTCGTCAG
CTTATGTCAAGTGCTGGCTGCTCCAACCAATAGTGAAGTCTCTCGTATGGCAGCAGGTCT
TCAGATAAAAAATTATCTAACTGCCAAAGATCTGAAAGTAAAAGAAGAATACCAGCAACG
ATGGCTCATGCTGGAAGACGGGCCCAGGGCGGAAATAAAAAAACTGGTGCTGCAGGCGCT
GGGCACAGAAACGTCAAAGCCATCTTCGGCGCCGCAAGTAATCGCCAGTATCGCGTGCGC
CGAAATGCCTTTCGGCCATTGGAAGGACTTAATTCCGCAGCTGGTACAAAGTGTGACGGC
CGAGCAGAGTACGGAACACCTGAAAGAGGCCGCATTGGAAGCGATCGGTTATATCTGTGC
TGATATGGATCAGCAGCATTTGGAAGCTCACTCCAACGAGATCCTGACGGCTATCGTGCA
GGGAATGCGTAAGCAAGAGCCCAGCGTCCAAGTGAAGCTGGCCGCCACCAACGCCATGCT
AAATTCTCTGGAATTCACTCGCGGAAATTTTGAGAAAGAGTCGGAAAGACATTTCATCAT
GCAAGTCATCTGCGAGGCCACGCAAGTTGAAGATACCAGGGGGGAGACGAATTCGATCCG
GGTCGCCGCGTTGCAATGTCTCGTGAAGATCATGTCCCTCTATTACCAATACATGGAGGC
GTACATGGGTCCCGCTCTTTTCGCGATATCGGTCGAAGCGATGAAGTCTGACGACGAGAA
CGTGTCTTTGCAAGGGATCGAATTTTGGTCGAACGTTTGCGACGAGGAGCTCGACCTTGC
GATCGAGATGACCGAGGCTGCAGAAGCAGGTCAGCCACCGTCGAGGACCAGCAAGTTTTA
TGCGAAAGGAGCCCTGCAGTATCTCGTTCCGATCCTAACCACCATACTCACCCGTCAGGA
CGAGAAAGATGACGACGACGAATGGAATCCCACGAAGGCGGCAGGCGTGTGTCTTATGCT
GTTGGCGACCTGCTGCGAAAACGATATTGTGCCTCACGTGGTGCCGTTCATCAAGGATAA
TATTTTGAATCCGGATTGGCGTTGTCGGGACGCGGCCGTCATGTCTCTAGGCTCGATTGT
GGAGGGCCCTACGTCGGACGTGCTGTGTCCCATACTGGAGCAGGGCATGGAGACTTTTAT
TCAGCTGTTGAAGGACGATAGCGTCGTGGTACGGGACACCACCGCTTGGGCGATCGGAAG
AATATGCAACGTCACTCCGGAGATTGTCATCAACGAGAAATATCTGATGCCGTTACTGAG
CGCCATGGTTGAAAATCTCGACGCCGAGCCGCGGGTCGCCGCCAATATCTGTTGGGCCTT
GTCTTCTCTGGCGGAATCTGCGTACGACCACGCGTCGGGCGAGTCCGACGAGGACCCCGC
CACGTACGCCATGTCCAACGTGTACGAGAAGATCATCGAGAAGCTGCTCAACACCACGGA
CCGCACGGACGGCCACATGAACAACTTGCGCGGCTCCGCGTACGAAGCGATCATGGAGAT
GATCAAGAACAGCCCGGCCGATTGCTACGAGACCGTGCTCAAGACCACTAACGTCGTTAT
GGAGAGAATCAACCAGCTGATACAGATGGAGTCGCGAATTCAGTCCAGCAGCGATCGGTC
GCAGTTCAACGATTTACAGTCTCTCCTTTGCGCAACCTTACAGAGCGTACTGCAAAAGGT
CAAGGCGGAACACGTCGAAGCTATCGCCGATAACATCATGGCGTCGTTACTGCATATGCT
CTCATCCGGTTCTGGAAGTGTGCACGAAGACATCATGCTGACGGTGGAATCCTTTATTGA
AGTTGTCGGCGCCAACTTTATCAACTACCTTCCCGCGTTCAAGAACTTTCTCTTTCCCGC
CCTACGCAACTCAACGGAATATCAGGTCTGCATAGTTGCTGTGGGCGTGGTGGGTGAAAT
CTGCCGCGCCATCGGCGCCAAGATCGGCCCCTACTGCGACCTGATCATGTCCAGCCTCCT
GGAGGACCTGTCCGACCCAAGCGTTCACCGCAGCGTGAAGCCGCACATCTTGTCCGTGTT
TGGTGACATCGCCCTCGCGATCGGGCCGGAATTCAAGAAGTACGTCGAGGTCGTGCTTCA
GACCTTGCAGCAAGCCGCCCAGGCCAGAGTGGACATGATATTCAGTTACCATGATGCTGT
GGCTTTATTGTGTGGTTCTGATAATATCACCTGGAGTGTGATGCGGACTCACCATAAATC
TACTATCCGTTTTACAAGTGTAAACGCGCGAGTAATCAACCGCTACATGAGTGCTCCGAA
AAAAAAGAGAATTAATTGGTCGCTGACCACCTTGCCGCCCACTTTGCGGTTCCCGCAGAA
TCACGCTTTCTCTCTCATCAAACAGAACGACTACGACATGATCGACTATTTGAACGAGCT
TCGCGAAGGCTGTCTCGAGTCCTACACGGGCATCATTCAAGGACTGAAAGGCGACCAACC
AGAACCAAACCGTAATGTCTTTGAGGTTTCGTA

InterProScan

Gene3D
ARM-like (IPR011989) - T[1-763] 5.6E-289 - T[809-870] 1.3E-10
SUPERFAMILY
ARM-type_fold (IPR016024) - T[3-751] 3.56E-159 - T[828-864] 3.56E-159
ProSiteProfiles
Importin-beta_N (IPR001494) - T[22-102] 17.989
Pfam
Importin-beta_N (IPR001494) - T[22-102] 6.8E-8
SMART
Importin-beta_N (IPR001494) - T[22-102] 9.3E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
IMB1_HUMAN 65.912 % 1010 0
TNPO1_HUMAN 20.229 % 83.2 3.52E-16