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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S10...'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'Moocul.CG.ELv1_2.S71...'
  4. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S208.g13480.01.t

Possible name(s)

FAT3; FAT4

Location

S208 [72,654 / 81,279]

Sequences

Amino acid sequence

Length: 519

>Harore.CG.MTP2014.S208.g13480.01.p
MKFTRSLFYVVIFILLLFRELTAEHQGDIHKVSDDESEAALISIRHIIYSVPEGIYELPE
IIDNITFFAEHGASFRFEEIAFKDNVKKRAQPKHFNVEFYNLTSEPNIQNQQRMRREVGT
ENSTQENGVTNGNGASNVTATQDTTLKSSNFTDSITNQATESTGNFTEATTEVTTIPSAN
ITHVTTKTDQTTTADNNKTTPVTTTAGPTLKSSTNATEHAWTITIPESPTTTHGNSTYQQ
STTTTTTIATRPATTINITSESTATTHIITSESTATATTGSSKPVSNTVACLRQIYELNR
EITDVHYLTISIDTYWADSGHIQGETILIQINVEDSNDNSPVFVESSLISVITKESRVGE
VVGQVKATDEDIGENANLIYEMLYFSERENNETASPDLPTFGIEKKTGLIFLSKSLKDFV
PPVKTTFKVIAKDNAGNIPCNRATATATVLIIDPHIPMETTPAKTTDSTIKSHPVPVGGI
IGGVIGFLVLVLIAGFLVWRHRRRKMNHDGQLVFMLDDG

Nucleotide sequence

Length: 4,788

>Harore.CG.MTP2014.S208.g13480.01.t
CCTGATTTTATGACGAAGATAACAGCGCGTTGACAAAAACACCGGAGGAACCCAAATTTT
ATACGAAGCGAATAATATGAAGTTTACGCGAAGTCTATTTTACGTAGTGATCTTTATCTT
GCTGTTATTCAGAGAACTGACTGCAGAACATCAGGGAGATATACACAAAGTTTCAGACGA
TGAAAGCGAAGCAGCTTTGATCTCCATTCGTCATATAATATACAGCGTACCGGAAGGAAT
TTACGAATTGCCAGAGATTATCGACAATATAACGTTTTTTGCTGAACACGGTGCTTCCTT
TCGATTCGAAGAAATAGCCTTCAAGGATAATGTGAAAAAAAGGGCTCAACCAAAACACTT
CAATGTGGAATTTTATAACCTTACTTCGGAACCGAACATTCAAAACCAGCAGAGAATGCG
GAGGGAAGTGGGTACGGAGAATTCGACACAGGAAAATGGTGTTACGAACGGAAATGGCGC
TTCGAATGTAACAGCAACTCAGGATACCACTCTCAAGTCCTCGAATTTCACAGATTCAAT
AACGAACCAGGCTACTGAATCGACAGGCAACTTCACTGAGGCTACGACAGAGGTTACTAC
GATTCCCAGTGCTAATATCACACACGTAACTACAAAAACTGATCAAACTACGACTGCTGA
TAATAATAAAACTACGCCAGTGACAACAACCGCGGGTCCCACGCTGAAATCGTCTACAAA
TGCCACGGAACATGCGTGGACCATTACTATACCAGAGTCGCCTACAACCACCCATGGAAA
TTCGACTTACCAACAGAGTACAACAACAACGACAACAATTGCTACGAGACCAGCAACTAC
CATCAATATAACATCGGAGTCAACAGCAACTACTCATATTATAACATCGGAGTCAACAGC
AACTGCAACAACGGGGTCATCGAAACCAGTATCAAATACGGTGGCCTGCTTACGACAGAT
ATACGAGTTGAACCGAGAAATAACAGACGTTCATTACTTAACCATCAGTATCGACACATA
CTGGGCGGATAGTGGACACATACAGGGCGAGACAATACTAATTCAGATAAATGTGGAAGA
CTCGAACGACAATTCGCCCGTCTTCGTCGAATCGTCTCTTATTTCTGTGATCACTAAGGA
ATCTAGAGTTGGCGAAGTTGTAGGCCAGGTAAAGGCCACAGACGAAGATATTGGCGAGAA
CGCAAATCTAATATACGAAATGCTCTATTTCTCCGAGAGGGAAAATAATGAAACAGCCAG
CCCTGACTTGCCTACTTTTGGCATAGAGAAAAAAACGGGTCTGATATTTCTATCCAAGTC
TTTGAAAGATTTTGTTCCTCCAGTAAAAACAACATTTAAAGTCATTGCGAAGGACAATGC
TGGGAACATCCCATGCAATCGCGCAACAGCTACGGCGACTGTTTTAATCATTGACCCTCA
TATCCCAATGGAAACAACTCCAGCCAAAACCACGGATTCCACAATAAAATCACACCCAGT
ACCTGTTGGTGGTATCATCGGTGGTGTGATTGGGTTCCTAGTGCTCGTTCTTATCGCGGG
ATTCTTGGTTTGGAGGCACAGGAGGAGGAAAATGAATCACGATGGCCAACTGGTCTTCAT
GCTTGACGACGGTTAGAAAAAGAAATTGACACCGGGGGTGCATTTCTACCGCGTCCCACT
AACCACTAATGTTTGGCTTTCTCCTGCCCCATGGCCCTTTTTTGATCAGTCTACCGAAAC
GACAAAAAACATTAAAAATAAAATGAAAAACTAAAGAACACTATAATACTGGATGAAACA
GTATGATCTCTAAGTTTCTAAAGAAGAATTCCATTACGACCAAGACTTACTATCCAAAAT
TTATAAAATACAGACTGTTTAACGGAACAGGACACATCAGGAAGATCCGAAGCTGGGATA
GGAATTAAACTTGTCAAAGAGTCAATTTTCCAATAGTGTTCTTTTTATTTACCTACCTAT
CTACTGTACAATTATTTCTCTTGTCTGTATCATCAGCGGTATAATGTTATGATGATTTCC
CCTCTTTCACTGTGTTTTGCAGAAAACTTAATCGACTGATAGGAAAGGAACTTTTCTGTA
TCCAATAAACAATCGCAAGCTCTCGTGTTTCGCAATATAACGATACAAAAGACGTTAAAG
ATTAGCGAAAGGCTGTTTTTCTCAAGCTACCGTATTACCCCAGTCATTGATCCTGGGGTA
AGAACAGAAGAACTATTATTTTAATAAGCATTATTTATTATCAAAGTCATGCAGAAGATT
AGCATGCTTCTAAAATTTCCGTAAATCACAAGATACTGAAATTATGTATTTGAAATAAAG
GTATATTTGGGAGGGCCGGCAATCTGAGGAACTTGCATGCATGACTAAGGTGGTACGGAA
ATCGTCTATGATGGAAATTGTTATTCGAAAGATTTTATTTGATCTTGTCATTTACGAGTT
TGTTTATCAATATTTTGTTAATTTGAAGCAATATATTTATCAACCTATCTGGCTTCCCAT
TGTATCTATGCAAATGTACTTTTATTACAGTTGTTATGGGAAATATCCCTCATAGTTTCA
AATTGTTGTTTCGAAATTCCTAGTTCACCCTAATATACACCATAAGGGCATTTAGGCTAG
GACCATTGGGGTGTGTGAAAATTGGAAAAAACGCTGGAAAATTTTCACAGAAAACTACCA
TCCAATTTCCGTGGGATTCCGCGCTAAATATTGAAAGATCGCCCCGGACGCCTGATTATA
ATTATTGATTAATTTTTTTGATTAAAGAATAAGGAGAACCTATTAAAATACATGAAATTA
ACAAAACTATTTCAATTTAATAGAATGATTTTATACAGAGATAATTTGCAGAGATAATTT
GCCTTTTGATAAATGCATGTTCCCCTTGCCACCTGCGTGTGATTCACGTAAAAGGAGAGT
GTTACTGTAATCGCATATTTCAATCTATTATATCACCATTGATCATCAGTTAGTATAACC
TTTCTAAATTCAACACCTAATTTATCTACTGTATTTTCAAATATTGAAGTTCTTTTATTT
TATTGTACAGTACGTTTTCAGCAGACTTTATCGTAACCAAACATCCTTAAAAAATTCGCT
CTACCTCGGACACATCCATAAAAATCAATAAGGCGATCAGTAGCAACACAAACCAATCAG
AAGTATAATTAAATTACAGTTTTATATATTATGAAATGGCATTGAAAATATGATTCTGAT
TATATCTTTATTTCCTCTGTACTGTAAGACTGTGTGCAATAAACCCTTGATAAAGCAAGT
TCTGTTTGATATGGGATAGAGATTGTGGTGAAACGGGTTGATTCGAAATTTATATGAAAA
GAAAACAATGCCAGATTAGAAAGAAAATCTCAGGCTGATGACTGAAATTTCTAAGATTAA
ATTGTAGTTAAGTTTGCAGATCTGTTTTTCACAATTTAAAATACTTTCCTGTACTAAGAT
TTCCCGGTTACGGTTCTAGGATTCTTTAATCGTATTCTACTTTTCATAAATCATAAACCA
CCCATCTACAATAACACATATCATATACCAATACCTTCTCCATGAAGCTACTTGAAAACG
TGATAGTATCCACCAACAAGCTGTCTAGCCATATGACCACAGTAAAGCATGTTGAAAATT
AGATAATTATGTGGTTAACATAGAGTATTATAAAACATACCGAAGATTCCACTCCCATTT
TCTCAAGAGTTCATTCACTGATACGCTCGGTATCTATCTTCACACGACCAGCATAAATAC
AATACAATACAATCTTCCAGAACAAATCCTCCTTTGCATCAAGAGACTCTCATGGATGAG
GAGAAATATTGACCTTTTGAACTTTAACCCTTGTGCTTCACGTGATCATGAAATTTCCTT
ACATTTCGCGTATTGTTGGAAATAAATAAACCTTTTTATCATGTTGAATAAAGCAGAATG
CTAAACTTGAGTGTGGTATCATGAATTTCGCGAGAACGATCTTAACAAAAGTACACGTCC
CCCAAAATAAGCTAATCATACACGATGTCTGGCACAACAATCTTTCCAAATACAGTCGAT
TTTCATATGAATTAACGAAGGTGAAAAAGCTGGATAAAAAGCTAGTACAGTTGGAGGAAA
AAGATTTGGTGGAAAAGCAAATAAAAGGTTGGGGATCGGGAGGGCAGAAGACGAATAAAA
CGGCGAACTGTGCATCGCTTTTGCATGTGCCCACCGGCATCACAGTAAGAGTACACGCCA
GTCGTTCCCTGCTGGATAACAAGGCAATCGCGAGGGCTAGATTAAGAATGAAAGTCGATC
GTTATGTTAAGGGGGAAGACAGCGTGCTTGCCCAGGAGGAGATGGTTACGGTCACACGAA
GTAAAACGAAAAGGTTGAATATCGACAATAAACGAAATTTGGAAGAAAAAGCTGAAGAGA
TGGATGATATCAAATATTAAATTGATTTAATTATTGTCAACAATATGCTCTAAATGCAGA
TTAGTATATATTTGTTCACCAGTAGAAGATATCTGGATGTTTGTTCTCAGCAAGAGATTA
CTTACTGCCAGAGAACATATCACTTGAAACATAAAAATTCGTTATCACTAACCTGTGGTT
TGTTGCCCATATATGCAGGAAAAAAATGATATATTTTCTGTATATTGTACGCATTTTCTC
TCTTCGTGTTATTAATTTTGTTTTCATCATTATATACTTCATCGATATTGCTGTTAAACA
GCAGTGTTGCATGTTTCTGTTTTGCAGAATAATAGCTAGTTAGAATGT

InterProScan

ProSitePatterns
Cadherin_CS (IPR020894) - T[331-341] .
SUPERFAMILY
Cadherin-like (IPR015919) - T[331-453] 4.43E-16
SMART
Cadherin (IPR002126) - T[365-457] 1.0E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value