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TRANSCRIPT CARD

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  1. EST 'AHC0AAA234YB14_RM1' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S20.g05676.01.t

Possible name(s)

AL355315.1; HOGA1; NPL

Gene model

Harore.CG.MTP2014.S20.g05676

Location

S20 [27,335 / 28,594]

Sequences

Amino acid sequence

Length: 393

>Harore.CG.MTP2014.S20.g05676.01.p
MYALCNKTVNSASYLIKSRLIQATFCPRRCLAKESGAVLNIGGISPPIPTPFKEDESIHY
EKLQANLEKWNKFKFRGYVVQGSNGEYPYFNVQERISLIKAVKECLPRDKLLIAGSGCES
TKATITLTQEMANRGADVSLVITPFYFKSGMTPSALISHYQAVADNSPIPVIVYNVPVNT
GIDLDVETLIELSQHENIIGLKDSSGNISKLSLLLHRTRDSPGGFQILAGSASFLLPAYA
IGCVGGICALGNILGEELCMLEDLFKAGKMEEAKLLQHRLVAPNIAVTTKYGVPGLKAVL
DAFGYFGGKTRMPLQPLSEKDKETVLRAFRDNHFIALIFCHKMGVIIGDKFITIFVFFAY
GVICNFSSKLSCNERIVSFIRNGVEYLHSTYCD

Nucleotide sequence

Length: 1,182

>Harore.CG.MTP2014.S20.g05676.01.t
ATGTATGCTTTGTGTAATAAAACTGTAAATTCAGCAAGTTATCTAATAAAAAGCCGCTTA
ATTCAAGCCACTTTTTGTCCAAGACGCTGCCTAGCGAAAGAATCTGGTGCAGTGTTGAAT
ATTGGTGGGATTTCTCCACCTATACCAACTCCTTTCAAAGAGGACGAGTCGATTCATTAT
GAAAAACTTCAAGCAAATCTTGAAAAATGGAATAAATTCAAGTTTAGAGGATACGTGGTT
CAGGGGTCTAACGGAGAATATCCCTATTTTAACGTTCAGGAGCGTATAAGTCTGATAAAA
GCCGTCAAAGAGTGCTTACCAAGGGATAAATTACTGATAGCTGGGTCCGGGTGCGAATCT
ACGAAAGCGACGATCACCCTCACGCAAGAAATGGCGAACCGAGGTGCTGACGTCTCCCTC
GTGATAACACCATTCTATTTCAAATCTGGTATGACGCCATCAGCATTAATAAGCCACTAC
CAGGCTGTGGCAGACAATTCCCCCATTCCTGTCATTGTGTACAATGTACCTGTTAACACA
GGGATAGACCTGGATGTGGAAACATTGATTGAACTTTCTCAACATGAAAACATTATTGGA
TTGAAAGATAGCAGTGGAAATATATCAAAACTTTCCTTACTGTTGCACAGGACACGGGAT
TCCCCCGGTGGCTTCCAGATCCTGGCAGGAAGCGCAAGTTTTTTGCTCCCGGCGTATGCA
ATTGGCTGTGTGGGCGGGATCTGCGCTCTGGGGAACATACTCGGGGAAGAACTCTGCATG
CTGGAAGATTTATTCAAAGCAGGAAAAATGGAAGAAGCAAAGTTACTGCAACACCGGTTG
GTGGCTCCTAATATTGCTGTTACTACGAAGTATGGAGTACCTGGTTTAAAAGCGGTGCTT
GATGCCTTCGGATACTTTGGCGGCAAGACACGAATGCCACTCCAGCCACTATCAGAGAAG
GACAAGGAGACCGTGCTGCGAGCTTTCCGAGACAATCATTTTATTGCACTAATTTTTTGT
CATAAAATGGGGGTAATAATTGGTGACAAGTTTATTACTATTTTTGTCTTTTTCGCTTAT
GGCGTTATCTGCAATTTTTCATCAAAACTCAGTTGTAACGAACGAATTGTATCTTTTATC
CGTAATGGTGTTGAATACCTACATTCTACCTATTGTGATTGA

InterProScan

Gene3D
Aldolase_TIM (IPR013785) - T[31-335] 1.9E-105
SMART
DapA-like (IPR002220) - T[40-333] 8.3E-84
PANTHER
DapA-like (IPR002220) - T[40-331] 1.3E-95
Pfam
DapA-like (IPR002220) - T[41-327] 3.2E-52
PRINTS
DapA-like (IPR002220) - T[74-95] 5.1E-11 - T[110-128] 5.1E-11 - T[169-186] 5.1E-11
ProSitePatterns
Schiff_base-form_aldolases_AS (IPR020625) - T[174-204] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HOGA1_HUMAN 49.671 % 340 5.18E-116