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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'KH2012:KH.C7.211.v3....' > 
  3. Transcript 'KH2012:KH.C2.64.v1.A...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S7...' > 
  5. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S20.g14358.01.t

Possible name(s)

CD207; CLEC4M; COLEC12

Gene model

Harore.CG.MTP2014.S20.g14358

Location

S20 [231,930 / 232,671]

Sequences

Amino acid sequence

Length: 246

>Harore.CG.MTP2014.S20.g14358.01.p
MVRIVSFLFLMCNLVLAATAHPSCSIEYDDESSQMNLQLNWSTVAHANAPPGRPGKRGPV
GEKGAKGDQGMKGSPGPKGECLPEFLEELQEQMESLKRKERIQEVILKLLVKRNNQLFDA
TNGNLYWISRNSMNWFDAKTYCEDNGAQLAAEGIRDNQVRPILNDRLSQNYWVGLSDIEN
EGQWKWIDGIGSNSFNTIWFPDEPNDGGSSSSSGEDCGILWRHDGVGKLNDLPCERLQIA
LCELIL

Nucleotide sequence

Length: 741

>Harore.CG.MTP2014.S20.g14358.01.t
ATGGTGAGAATTGTATCCTTCCTATTTTTGATGTGCAATCTAGTACTAGCTGCTACCGCG
CACCCCAGTTGTTCAATAGAATATGACGATGAGAGTTCGCAGATGAATTTACAGTTGAAT
TGGTCAACAGTAGCACATGCTAATGCTCCACCCGGTCGACCTGGAAAGCGTGGTCCGGTG
GGAGAAAAGGGTGCGAAAGGTGACCAAGGTATGAAAGGATCGCCGGGCCCCAAAGGCGAA
TGCCTGCCGGAATTTTTGGAAGAATTGCAAGAGCAAATGGAGAGTCTCAAACGGAAAGAA
AGAATACAGGAGGTTATCCTGAAACTGTTGGTGAAGCGAAATAACCAACTGTTCGATGCC
ACAAACGGTAACCTTTACTGGATAAGTAGAAATTCGATGAATTGGTTCGATGCAAAGACA
TACTGCGAGGATAACGGAGCGCAGTTGGCTGCTGAAGGAATAAGGGACAACCAAGTACGC
CCAATACTGAATGACCGGTTGAGCCAAAACTATTGGGTTGGTCTTAGTGATATTGAAAAC
GAGGGCCAATGGAAATGGATAGACGGAATCGGGTCGAATTCCTTCAATACAATATGGTTT
CCTGATGAGCCTAATGATGGTGGTTCAAGTAGTTCAAGTGGAGAAGATTGTGGTATTTTA
TGGAGACATGATGGAGTCGGTAAATTGAATGATTTGCCTTGTGAACGACTGCAAATTGCG
TTGTGCGAATTAATACTTTGA

InterProScan

Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[116-245] 2.0E-25
SMART
C-type_lectin-like (IPR001304) - T[116-243] 3.2E-10
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[121-243] 17.37
SUPERFAMILY
CTDL_fold (IPR016187) - T[121-244] 5.23E-26
Pfam
C-type_lectin-like (IPR001304) - T[132-243] 1.1E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value