- Transcript 'KH2012:KH.C2.967.v1....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocul.CG.ELv1_2.S81...' >
- Transcript 'KH2012:KH.L134.14.v1...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S211.g00465.01.t
Possible name(s)
APP; C1QTNF9B; COL7A1
Gene model
Location
S211 [0 / 18,990]
Amino acid sequence
Length: 455
>Harore.CG.MTP2014.S211.g00465.01.p
PGLPGIPGDAGPKGETGPKGDRGETGQDGKPGESGPEGPLGTVGPRGMPGVSGPAGDAGI
KGDLGPVGPAGPPGIPGKCECDDPPGKQTSGSSGTDTNGNQGTSTCIYKNKQYAERDIWT
AEDCNECMCLDGVVTCLQITCPERSDCKYTYRPTGYCCPVCCPNQVVGSGEASGDQSYYD
DGAMETIEADVGEVITEDYGTEDYFDNETSTEDVFDPLGCPIAMMTDRSAEPLASDRCFL
KSDTGPCRQKFQRFYYDKVRRKCVSFIYGGCEGNANKFSTKEECQISCGSAIESIVLSPN
AAQIAGPPGVRGPAGPVGPQGPQGKPGPAGIGLPGSRGTRGPPGPPGSDATVNFNATELD
ELKTEVEALKMRIVDLESMVLTQLSVLSKHDPAGLMNPSDLGLTTRRDEFVSLLGQELPA
DSNSETQGKYGDEEDYFYSTTLDNDQYDYVPEEEE
Nucleotide sequence
Length: 4,439
>Harore.CG.MTP2014.S211.g00465.01.t
GCAAAGTGTCCGTTTCATATTTTAAGGAAAAATATTTCACCGAATACAAAATGTTTGAGA
TGTCTGATTTAGCAGTTGCTTTTGTCCTTCCACAGCTGAAGAAACTCTTCTCAAGCTGGC
TTCCTCTTAGTGATCCCTCGCATGGAACTACTGAAATGAAAAGGTGGAAAGTTCTTCTTG
AATTGGATCAATCATCATTCTCACTGCAGAATTCTGCAGCTGCTTCTCAACAGACTTCTA
GTGACATGTATCAGTACCTGGTTTGGGAATCTTGGATGCCTCGAATAAGAAACGCCGTTT
ACCAATGGGATCCGAGAAACTGCGATCCGATGATCGAACTTGTCGAACAATGGATGCCCT
TGTTGCCGCAATGGATATTGCGCAATTTGTTATCTCAGTTGATACTTAGTCGACTTCAAC
AAGAAGTAGATGGATGGAATCCACTTATTGATCCAGTTCCTCTGCATTCATGGATACATC
CTTGGCTCCCACATTTGAAAGATGAACTTGAGCCACTATATGGACCAATAAGACAGAAAC
TCGGTCATGCATTACAAATGTGGCATCCTCGTGACCCTTCAGCTAAGGTTATATTAGAAC
CATGGCATGGGGTTCTCTCTAGGGGGAGCTGGGATGCATTCATGATTAAAAACATTATCC
CAAAGCTTGGAAACTGTCTCCGAGATTTTATCATCAATCCTCACGATCAATCTCTCGCCG
GTTTCAAGTGCGTTATAGAATGGGAGAATCTCGTTCCTCCTTCATCGCTCGTCACTCTTC
TCGAAACTCACTTCTTCCCCAAGTGGTTGAGAGCTCTCAGTTCGTGGTTGAATTCTGAAT
CTGTCGATTATGAAGAAGTCACACGGTGGTACGGTGGATGGAAGTCGATTATACCGGAGG
GACTCATGACAAACTCTTTTGTTAAGGATCGCTTCAAGCAAGCAATTGAAATGATGAACA
GAGCTGTTACAGGTCGTAATCCAAGAGCCAATGAACAGTACGAGGAAGACAATTTCAATC
AACCTCCCAGTCGTCCATATCATCCGTTATCGCAAGCGGCGCATTCGTCCGTTCCCGCGC
ATTTCCGAGATCTCGTTCAACAAAAAGCAGAGGAACGTGGTCTTGTGTTTGTGCCACTTA
AGACAGCGGTGGATGGAAAAATTGTGTACAGGTTTGGCTCAAGAGCGATATACATTGATC
GAAGCGTGGTTTACATGAAGGAAGGTGACGTATACTTGCCACAATCACTTGCAGTTGCAC
TTGATAAAGCTTCAATGGGATGAATATAGAAACAGATACCTTTGTTAAGTATTCTGGGTT
CTGTTCAGCTGCTCCTAAACCAATGCTTTGGTAGTCTGTGTGTGAAACGAATGTGCACGA
ATGCTTGTGCAAATGTATACTTGATATCATACCAAGATAATTTGTTAGTATTCTTGGTTC
TGTTCAGAAGCTGATGGACCAATGTAACTAATGTAAACCAAATATTTTGGTAGTCTTTTC
TATGTGCACTAAATGCTTGTGTGTACTTGATAATATTTCAAGATGATTTAACTCGGCCAA
TCTCATCTCTGTATCCACAAAGTTTAGGGGTTAAGTTAAAATTTCGTTCTCTACTTTTGA
CCCTCGATTAGCGGGATTTCAGTAAAATATGTACTGTTTTTCTGCTACTAAAGAATCCAA
GACAACTGTCGTCTTTTCGAAGATAAGCTTGTCTTTGTTTATTAAGAATAAATTTGCAGT
GTTTGTGAATGACAAGAGCAAGAAAAACACTAGCGGTGTTAAAAAATACTTCATGCTGGC
ATGAAAAAGGAAGGAGAAAAAAACTACAAACCCCAAAAGTAAAATCATAACCAACCCCCG
ATGACAGCACAAAAAAACATGGACAATCATTTTATAAAAGAACAAAAAGATATGCTGAAC
AGAAAAAATAACTATCAAAGGAACATATATTATGAGGTCAATACCCCATTGGAGTTTATC
TTAAAAAAATTAACAGCAAAGGTGAGTTGTTAAAATTTGGACACCCAATATTTTAATGAA
CTAGGTCTGTTTATAAAATCGACTACGATAACTTATAAAATGTAGATCTTTGAACAAGAG
CAGTGGTGAGATTCAACTGGTTCCAACCGATCACTAAAATTAAAATCAATTCCTAAATTG
TTTCCAAAATGAATTTATTACGGAGTAAAATTTGGATATTTTTTATCGATCAGAAATCGA
ACGAACCGGATCCTAAAAAATTTGAATCCCGCCACTGAACAGGAGGTATCACGGAACTCG
TTCAATATGTAATGTTTTAAAGTTGTATATATGATTACAGTAAATGCGCTTTGTACATCA
CATGCTTGAATGAGTGAAAGTGCTCTGTATTATCGAGGAACCAACATATTTTTGAATAAG
CGAATTTGAACTTGCAAGTTTTTAGTGCAGTATAGGATGTGATAATATATCTGATTATCA
CACCTTAAGACTGAATTGAAACTCAAGGTAACCAACAAATTAATCTTAACTACAATGATT
ATAGGAAGATAGCCTAAGGCAGGTTTCCCACTGTAGTTATAATTTTACTTATATTGAATC
ATTCTTATTTTTTGACTTGAATAAGACATCACAATATGACTCTTATCCCTTATTATTAAT
ACCATAGAACACAGCCATATGCCACATTATGCTAAATTATTCATTGCAATATACCTTATC
CAACAGTGCGATTCTGGCTCTCACTAGAACAAAGTTCTGACAATGATAATGTAGGATCTG
TTTGCATTTGGGAACTTGACAATTCCCTACAGCGATCTAGATTATTTTTGATGGTTCGGT
TTTGGGGTTAGGCTTATAAGGTCTTGCAAACATGGGGATTCTAGGTTCGACTGAAAAAAT
GCATGTGGGAAATATCTGCATAGGAAATTATCTTGTAAGAAATAATCTGTAGGAAATTTA
AAATGAATTGATATCCTGACGAGATCTTGTATGTTGGTTATTATGTCGCTTGATTCCGAT
TGTCAGTCTTTGATTCCCCATATACAATAGTTTGCTTTGTGTTGTTGTCTCTACATATAA
TTGTCAACATTATTCTTCTTCCTCTGGGACGTAGTCATACTGATCGTTGTCTAATGTAGT
GCTGTAAAAATAGTCCTCTTCATCTCCGTATTTACCTTGAGTTTCACTATTGGAATCGGC
TGGTAATTCCTGGCCAAGTAATGACACAAACTCGTCCCTGCGCGTGGTAAGTCCAAGGTC
AGATGGATTCATCAGTCCGGCTGGATCGTGCTTAGATAACACAGACAATTGAGTCAATAC
CATTGATTCTAAATCGACTATTCGCATTTTCAGTGCTTCCACTTCAGTTTTGAGTTCATC
AAGTTCTGTTGCATTGAAATTCACTGTTGCATCTGATCCTGGCGGTCCCGGCGGTCCTCT
TGTTCCTCTGGAGCCTGGGAGGCCGATCCCGGCAGGTCCTGGCTTCCCTTGAGGTCCTTG
TGGACCAACTGGCCCTGCTGGTCCTCTTACCCCAGGTGGACCAGCTATTTGTGCTGCATT
GGGTGATAACACGATGCTTTCTATTGCGCTTCCACAAGAGATTTGACACTCTTCCTTTGT
AGAGAATTTGTTAGCGTTTCCCTCGCATCCACCGTAGATGAACGAGACGCATTTTCTTCT
CACTTTGTCGTAGTAGAAACGCTGGAACTTTTGACGGCACGGGCCGGTGTCGGACTTCAG
GAAACACCGATCTGATGCAAGCGGCTCAGCGCTACGATCTGTCATCATTGCTATGGGACA
TCCAAGAGGGTCAAACACATCTTCAGTACTAGTTTCATTATCGAAATAATCCTCTGTTCC
GTAATCTTCTGTTATTACTTCACCAACATCTGCTTCAATGGTTTCCATGGCGCCGTCATC
ATAATAGGACTGATCACCGCTTGCCTCTCCTGAGCCCACAACTTGATTGGGACAGCATAC
GGGGCAACAGTATCCCGTCGGTCTGTATGTATACTTGCAGTCAGATCTCTCGGGGCAAGT
TATTTGTAAACAAGTGACCACTCCATCCAAGCACATGCATTCGTTGCAATCTTCAGCGGT
CCAAATATCTCTTTCTGCATACTGTTTGTTTTTGTAGATGCAAGTCGAAGTGCCTTGATT
ACCATTCGTGTCAGTTCCACTAGAACCACTGGTTTGCTTCCCCGGGGGGTCATCGCATTC
ACATTTACCAGGAATTCCAGGTGGACCTGCCGGACCGACCGGACCCAAATCTCCCTTTAT
TCCTGCATCACCGGCTGGTCCACTTACACCTGGCATACCTCGAGGTCCCACAGTGCCCAA
TGGACCTTCTGGGCCTGACTCCCCTGGCTTGCCATCTTGACCTGTCTCACCTCGATCCCC
CTTTGGTCCAGTCTCCCCTTTTGGACCAGCATCTCCAGGTATTCCTGGCAAGCCGGGAG
| Pfam |
Collagen (IPR008160) - T[5-62] 2.9E-9 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[104-162] 11.873 |
| SMART |
VWF_dom (IPR001007) - T[106-161] 9.0E-12 |
| Pfam |
VWF_dom (IPR001007) - T[106-161] 3.2E-9 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[124-162] . |
| Gene3D |
Kunitz_BPTI_sf (IPR036880) - T[225-300] 9.1E-23 |
| SUPERFAMILY |
Kunitz_BPTI_sf (IPR036880) - T[232-290] 2.98E-20 |
| PRINTS |
Kunitz_BPTI (IPR002223) - T[235-249] 2.1E-9 - T[263-273] 2.1E-9 - T[273-288] 2.1E-9 |
| SMART |
Kunitz_BPTI (IPR002223) - T[236-289] 9.7E-22 |
| CDD |
Kunitz_BPTI (IPR002223) - T[236-289] 1.95352E-21 |
| Pfam |
Kunitz_BPTI (IPR002223) - T[238-288] 2.4E-17 |
| ProSiteProfiles |
Kunitz_BPTI (IPR002223) - T[238-288] 15.298 |
| ProSitePatterns |
Prtase_inh_Kunz-CS (IPR020901) - T[266-284] . |
| Protein Name | Identity | Bit Score | e-value |
|---|