- Transcript 'Harore.CG.MTP2014.S1...' >
- Clone 'cicl026b08' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S214.g10945.01.t
Possible name(s)
SPSB1; SPSB2; SPSB4
Gene model
Location
S214 [75,467 / 78,747]
Amino acid sequence
Length: 335
>Harore.CG.MTP2014.S214.g10945.01.p
MGQKISSSDGRSGIRQLAFIEPIISRTASRHSSHSSNSSSNNSSTTRSGRRSDVTSPPKH
GRRHSHRDHHRSHRHHNGNHLSASGLEPECPHRLDVLLDMPAAGITDQRKHGWNPEDKSV
NVFIKDDDHVMHRHPVAQSTDGVRGKVGFSRGLHCWEITWNTRQRGTHAVVGVATIEAPL
TCVSYRSLIGQNEHSWGWDLGRNKLYHGGKHHREDKASGCKVYPTYLDSDVNFVVPEKIL
VVLDMDEGTMSYVADGQYLGVAFSGLKGKTLYPVISCVWGHCEVGIKYINSLEPAPLPLA
ELCRRRVRMSLGKPNLHHVQKLPLPNSLKDYVLYR
Nucleotide sequence
Length: 1,891
>Harore.CG.MTP2014.S214.g10945.01.t
TCGGACGTGTCACACTGCCCAGACATTAGTCGAGCAACGTGGTAGTAAGTAAAGGTCCTT
TCGTTTTCGTTACTGAAAATATATCGTTGACCGTTTTAAGTTTTAAGTTACTGTTTAAGA
ATATTGAAGAGTTAGGCCCGAAGGAAGATAGTTTTTAAAAAAGAATTTACATCTATCAAA
ACCAACTGCTTATATTTCGAGAAACACTAGAATTGAAGACGGTGCTATTTGATCCTGATC
CTGAAAATTCGTCAGACAGGCACAGAATATGGGACAGAAAATTTCATCAAGCGATGGTAG
ATCCGGCATAAGGCAATTGGCGTTTATAGAGCCAATCATTTCACGTACTGCATCGAGACA
TTCATCGCATTCTTCTAATAGCTCGAGTAACAATAGTTCAACGACGAGATCAGGTCGACG
TAGCGATGTAACTTCACCACCTAAACATGGTCGTCGACATAGTCATCGAGATCATCACAG
AAGTCATAGACACCATAATGGAAATCATTTATCTGCTTCTGGTTTGGAACCGGAATGTCC
ACACAGGCTTGATGTTCTCCTTGATATGCCGGCAGCTGGTATAACAGACCAACGCAAGCA
TGGTTGGAACCCAGAAGACAAGAGTGTTAATGTTTTCATCAAAGATGACGACCATGTAAT
GCACAGACACCCGGTAGCTCAATCCACAGACGGTGTAAGGGGAAAAGTAGGATTTTCCCG
TGGACTTCACTGTTGGGAAATCACATGGAACACCCGGCAACGTGGTACTCACGCAGTAGT
AGGTGTAGCCACAATTGAAGCTCCATTGACATGTGTTAGTTATCGATCTCTTATCGGCCA
AAATGAGCATTCGTGGGGCTGGGATCTTGGTCGCAACAAACTGTATCATGGTGGAAAACA
TCACCGTGAAGATAAAGCCAGTGGTTGCAAAGTGTATCCTACCTACTTGGACTCGGATGT
TAATTTTGTTGTTCCGGAGAAAATATTGGTTGTTTTGGATATGGATGAAGGTACTATGAG
CTATGTTGCCGATGGACAGTATTTGGGTGTCGCGTTTTCTGGCCTTAAAGGAAAAACGTT
GTACCCGGTCATAAGTTGTGTATGGGGTCACTGTGAAGTCGGGATTAAATACATCAACAG
TCTTGAACCTGCCCCATTGCCACTTGCTGAGCTATGCAGAAGAAGAGTAAGAATGTCATT
GGGAAAACCAAACCTTCATCACGTGCAAAAATTACCTTTGCCAAACTCTCTTAAAGACTA
CGTTTTATATCGATGAACAGCGATTGGTTTACCTTGTGGTTGTAACATAACCAAGAGATG
TAATCGGTCGTGTACGGTGATATGTTCCACTGAAAGTCGCAATCGAACCTGTTAGGTGCT
ACACCAACTTTGCATGCAGAAAAACTGGCAAACAAAAGTGATTTCAATCCATTACAGGGA
TGCTTTTCTATGAAGTAATGATATCTCTCCCTGGATTACTCCCATTTTCTTTTAATTCCA
CTGTGGATCTCTTCTTGGAGTTGGGGAAAGTGCCTGGAATTTCAAAAGCCACTGAATCGT
CGCCAGTGTTCTAGAGGTTGGCTTTCAGGACTTTTTGATTTCTAATTTGAGTTTTTGTTG
TGCAATATGCTTTGCATCGTTAAGACTTTTTATTTCAAAGACCACTTGCTCTGCTGCATA
CAGCAGGTAAGGATTTAGTATGTATTATCCAGGGAAATAATCCCAGTTGTTTCTTGTGTT
TTTTAACACTTTGTTTTATTCGTATTATATTCCTATTAACATTATTCTCCCTATTTAATT
GTTTTTACATTTTAAATGCCATTAAACGTTGTGAACGACATATGAACAACTGCAGTAGTG
TTTTCAACTTCCACGAGTTCGCGGTGAGCGC
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[90-308] 9.1E-58 |
| ProSiteProfiles |
B30.2/SPRY (IPR001870) - T[91-293] 13.221 |
| SMART |
SPRY_dom (IPR003877) - T[151-292] 2.4E-20 |
| Pfam |
SPRY_dom (IPR003877) - T[154-282] 2.4E-18 |
| Pfam |
SOCS_box (IPR001496) - T[296-334] 2.1E-10 |
| ProSiteProfiles |
SOCS_box (IPR001496) - T[296-335] 13.376 |
| SMART |
SOCS_box (IPR001496) - T[296-335] 3.1E-12 |
| SUPERFAMILY |
SOCS_box-like_dom_sf (IPR036036) - T[297-334] 8.11E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPSB4_HUMAN | 61.905 % | 336 | 6.63E-116 |
| SPSB1_HUMAN | 58.893 % | 324 | 3.07E-111 |
| SPSB2_HUMAN | 51.22 % | 254 | 9.18E-84 |