- Clone 'ma145k13' >
- Transcript 'Mooccu.CG.ELv1_2.S48...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S214.g10945.02.t
Possible name(s)
SPSB1; SPSB2; SPSB4
Gene model
Location
S214 [75,230 / 78,817]
Amino acid sequence
Length: 350
>Harore.CG.MTP2014.S214.g10945.02.p
MGQKISSSDGRSGIRQLAFIEPIISRTASRHSSHSSNSSSNNSSTTRSGRRSDVTSPPKH
GRRHSHRDHHRSHRHHNGNHLSASGLEPECPHRLDVLLDMPAAGITDQRKHGWNPEDKSV
NVFIKDDDHVMHRHPVAQSTDGVRGKVGFSRGLHCWEITWNTRQRGTHAVVGVATIEAPL
TCVSYRSLIGQNEHSWGWDLGRNKLYHGGKHHREDKASGCKVYPTYLDSDVNFVVPEKIL
VVLDMDEGTMSYVADGQYLGVAFSGLKGKTLYPVISCVWGHCEVGIKYINSLEPAPLPLA
ELCRRRVRMSLGKPNLHHVQKLPLPNSLKDYRCNRSCTVICSTESRNRTC
Nucleotide sequence
Length: 2,143
>Harore.CG.MTP2014.S214.g10945.02.t
CTTTTTTCTCTCCGCCGCTCATAATCACAACTCTGTTCTACGTAATGGAAATTTCCACTT
GCTATATAATTCGGACGTGTCACACTGCCCAGACATTAGTCGAGCAACGTGGTAGTAAGT
AAAGGTCCTTTCGTTTTCGTTACTGAAAATATATCGTTGACCGTTTTAAGTTTTAAGTTA
CTGTTTAAGAATATTGAAGAGTTAGGCCCGAAGGAAGATAGTTTTTAAAAAAGAATTTAC
ATCTATCAAAACCAACTGCTTATATTTCGAGAAACACTAGAATTGAAGACGGTGCTATTG
ATCCTGATCCTGAAAATTCGTCAGACAGGCACAGAATATGGGACAGAAAATTTCATCAAG
CGATGGTAGATCCGGCATAAGGCAATTGGCGTTTATAGAGCCAATCATTTCACGTACTGC
ATCGAGACATTCATCGCATTCTTCTAATAGCTCGAGTAACAATAGTTCAACGACGAGATC
AGGTCGACGTAGCGATGTAACTTCACCACCTAAACATGGTCGTCGACATAGTCATCGAGA
TCATCACAGAAGTCATAGACACCATAATGGAAATCATTTATCTGCTTCTGGTTTGGAACC
GGAATGTCCACACAGGCTTGATGTTCTCCTTGATATGCCGGCAGCTGGTATAACAGACCA
ACGCAAGCATGGTTGGAACCCAGAAGACAAGAGTGTTAATGTTTTCATCAAAGATGACGA
CCATGTAATGCACAGACACCCGGTAGCTCAATCCACAGACGGTGTAAGGGGAAAAGTAGG
ATTTTCCCGTGGACTTCACTGTTGGGAAATCACATGGAACACCCGGCAACGTGGTACTCA
CGCAGTAGTAGGTGTAGCCACAATTGAAGCTCCATTGACATGTGTTAGTTATCGATCTCT
TATCGGCCAAAATGAGCATTCGTGGGGCTGGGATCTTGGTCGCAACAAACTGTATCATGG
TGGAAAACATCACCGTGAAGATAAAGCCAGTGGTTGCAAAGTGTATCCTACCTACTTGGA
CTCGGATGTTAATTTTGTTGTTCCGGAGAAAATATTGGTTGTTTTGGATATGGATGAAGG
TACTATGAGCTATGTTGCCGATGGACAGTATTTGGGTGTCGCGTTTTCTGGCCTTAAAGG
AAAAACGTTGTACCCGGTCATAAGTTGTGTATGGGGTCACTGTGAAGTCGGGATTAAATA
CATCAACAGTCTTGAACCTGCCCCATTGCCACTTGCTGAGCTATGCAGAAGAAGAGTAAG
AATGTCATTGGGAAAACCAAACCTTCATCACGTGCAAAAATTACCTTTGCCAAACTCTCT
TAAAGACTACAGATGTAATCGGTCGTGTACGGTGATATGTTCCACTGAAAGTCGCAATCG
AACCTGTTAGGTGCTACACCAACTTTGCATGCAGAAAAACTGGCAAACAAAAGTGATTTC
AATCCATTACAGGGATGCTTTTCTATGAAGTAATGATATCTCTCCCTGGATTACTCCCAT
TTTCTTTTAATTCCACTGTGGATCTCTTCTTGGAGTTGGGGAAAGTGCCTGGAATTTCAA
AAGCCACTGAATCGTCGCCAGTGTTCTAGAGGTTGGCTTTCAGGACTTTTTGATTTCTAA
TTTGAGTTTTTGTTGTGCAATATGCTTTGCATCGTTAAGACTTTTTATTTCAAAGACCAC
TTGCTCTGCTGCATACAGCAGGTAAGGATTTAGTATGTATTATCCAGGGAAATAATCCCA
GTTGTTTCTTGTGTTTTTTAACACTTTGTTTTATTCGTATTATATTCCTATTAACATTAT
TCTCCCTATTTAATTGTTTTTACATTTTAAATGCCATTAAACGTTGTGAACGACATATGA
ACAACTGCAGTAGTGTTTTCAACTTCCACGAGTTCGCGGTGAGCGCAATGAAATAGTACT
TGTTTTTGCAAGCATAATTCACACGAGGTTAGGGATTTGTTTACTACTGTGTAGTCGCTT
CGGAGATTGTTTCAGAATACGTGCTTCTAGCAACGTCCACTCCTTTGTTTGTTGAGTTGT
CTGTTTGTCACGACTCCTGGTATAGTAGGTTATTTTTTCGGGTGATCGGTTGTATTCGAA
GGTCGATGGTGTCCAAGGAGAGGCAGGTCTAGTAGAATGGAAC
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[90-308] 1.07E-57 |
| ProSiteProfiles |
B30.2/SPRY (IPR001870) - T[91-293] 13.221 |
| SMART |
SPRY_dom (IPR003877) - T[151-292] 2.4E-20 |
| Pfam |
SPRY_dom (IPR003877) - T[154-282] 2.7E-18 |
| SMART |
SOCS_box (IPR001496) - T[296-335] 6.1E-8 |
| ProSiteProfiles |
SOCS_box (IPR001496) - T[296-331] 12.383 |
| Pfam |
SOCS_box (IPR001496) - T[296-331] 3.6E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPSB4_HUMAN | 62.5 % | 334 | 4.32E-115 |
| SPSB1_HUMAN | 59.036 % | 320 | 2.69E-109 |
| SPSB2_HUMAN | 51.24 % | 249 | 1.31E-81 |