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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S219.g09612.01.t

Possible name(s)

RAPGEF1

Location

S219 [2,628 / 28,830]

Sequences

Amino acid sequence

Length: 802

>Harore.CG.MTP2014.S219.g09612.01.p
MVAYRHRYRYRYAYHTLSSAGREILFSFCLAHEWISVDYSVWIIYIDKFTMADNTEKRES
PSGQDTTRKMAKKLKTAKQKLTESFKSSALKEFYREKYKNNRRINKSYERNHNKLHRRHS
PGTSSLEDLFRPDDTTDGNKQDDAEQKMKGLCKDVKLSLVYFEAIVCKNITEQYAGSATK
ILETVMTIVDQLSKSSLSPEQSSVLMSCRSRVVQSLAQLIHWSDRTLLNSVKSNEDKPIK
EIVQSVLSAVEDLVEESIKKLQSHNNNSAPVTPLKAMKPPWPTVDDDALAVPPPKPPLPL
DRQKTPPLPPKMRHSGSKPVGIVMPFNISLDQQQSSNTVFGVQGLTRSEESLLDHNNQQF
SLDAELKNGLSLREGADRSSMCSSNFSDTTYDDASSESSMMKDMDRAFKSSLNSKKSAGY
DDDYERLRLDSTCSNTNDYPTRPLSDPNVLLLRLSITDESNIIASGHSWSSLLQARNGER
LRNTVSNSEGDVSGPPPALPAKQRHSLANKHLSDISHFSIGSMESVDTVSSSPDEDEKPP
PLPVKQKTIQAYMQMFFSEAQAPPMAEIVRQTAKRYHHSSFGSNSSIEVTPQHGPMKASY
QPSYDTQSTYSSSSTGRHRDSIASITSTTSDISSSSLSVNHTPPALPPKVRRSTLESINT
TPLSPRNNSVSDLPLQEPPEKESPLPVKIKPMLFPDKQSRKSIGKSELRRSIKHKENEKN
LDSIIDPGDLLDRIEVLDFIAFTTAKDEGSAIMAGCIDALIVYAAENKKNLLYYEAFLTT
YRSFITPMELLKKLLYRYPLKI

Nucleotide sequence

Length: 5,546

>Harore.CG.MTP2014.S219.g09612.01.t
ATGGTCGCGTACCGGCACCGGTACCGGTACCGGTACGCGTACCACACTTTGAGTAGCGCT
GGGCGAGAGATTTTATTCAGTTTTTGTCTTGCTCATGAGTGGATATCTGTTGACTACTCG
GTGTGGATTATTTACATTGACAAATTCACCATGGCTGATAACACTGAGAAGAGAGAGTCA
CCGAGTGGACAGGATACTACTCGAAAAATGGCCAAGAAGTTGAAAACTGCCAAGCAGAAA
CTGACTGAATCTTTTAAATCATCAGCGCTCAAAGAATTTTACAGAGAAAAATATAAAAAT
AACAGAAGAATCAACAAAAGTTACGAACGTAACCATAACAAATTACATCGGCGGCATAGT
CCTGGGACTAGCAGTCTTGAAGATTTATTTCGTCCAGATGATACCACAGATGGAAATAAG
CAGGACGATGCAGAGCAAAAGATGAAAGGTTTGTGCAAAGACGTCAAGTTGTCGTTGGTG
TACTTTGAAGCCATCGTTTGCAAAAATATTACCGAACAATATGCTGGTTCAGCTACAAAA
ATTCTCGAAACCGTTATGACAATAGTCGACCAACTCTCCAAGAGTTCTTTGTCACCCGAA
CAAAGTTCCGTGTTAATGTCATGTCGTAGTCGAGTAGTACAGAGCCTGGCTCAACTAATA
CACTGGTCCGACCGGACCTTGCTTAATTCGGTGAAATCGAACGAAGACAAGCCAATAAAA
GAGATCGTTCAATCTGTTTTAAGTGCTGTGGAAGACCTCGTGGAAGAATCGATTAAAAAG
TTACAAAGTCACAATAACAACAGTGCTCCAGTGACTCCACTTAAAGCCATGAAACCGCCT
TGGCCTACAGTTGATGATGATGCACTTGCAGTTCCCCCACCTAAGCCACCTCTTCCATTG
GACAGGCAAAAAACTCCTCCACTACCCCCGAAAATGCGTCATAGTGGATCAAAACCTGTT
GGAATTGTTATGCCATTTAATATATCCCTAGATCAACAGCAGAGTTCCAATACAGTATTC
GGGGTGCAAGGTTTGACTCGTTCAGAGGAGTCTTTATTGGACCACAATAATCAACAGTTT
TCTCTCGACGCGGAACTTAAAAACGGCCTCTCTCTCAGAGAAGGGGCAGACAGGAGCAGC
ATGTGTTCAAGCAATTTTTCAGATACAACATACGATGATGCTTCATCAGAAAGCAGCATG
ATGAAAGATATGGACAGAGCATTTAAAAGTTCTTTAAATTCGAAAAAATCAGCCGGCTAT
GACGATGACTATGAGAGACTCCGGTTGGATAGCACTTGCAGCAATACGAACGATTATCCA
ACACGACCGCTCTCTGACCCTAACGTACTTCTACTGAGGTTGAGCATAACGGACGAGTCT
AACATCATTGCGAGCGGTCACAGCTGGTCCTCATTGCTTCAAGCAAGAAACGGAGAGAGA
CTTCGCAACACTGTATCTAACAGTGAAGGTGATGTTTCTGGACCACCTCCCGCTCTGCCT
GCAAAACAAAGGCACTCTTTAGCCAACAAACATTTGAGTGACATCAGCCACTTCAGTATT
GGGAGCATGGAATCTGTAGACACTGTATCTAGCTCCCCAGACGAAGATGAGAAACCTCCT
CCTCTTCCAGTGAAACAAAAGACAATACAAGCCTATATGCAGATGTTTTTCTCGGAGGCT
CAGGCTCCCCCCATGGCTGAAATCGTTCGACAGACAGCCAAGAGATATCATCACTCTAGT
TTCGGCAGCAACAGCAGCATTGAAGTGACGCCTCAACACGGACCTATGAAAGCTTCCTAT
CAACCTTCATATGATACACAGTCAACATACAGTTCAAGTTCAACGGGACGCCACAGAGAT
TCTATTGCTTCTATAACCTCGACAACTTCAGACATATCTTCTTCTTCCTTATCTGTAAAT
CACACTCCTCCAGCTCTCCCACCTAAAGTGCGCAGGAGCACGTTGGAATCGATAAACACT
ACCCCACTGTCTCCAAGAAATAATTCTGTTTCAGATCTACCCTTGCAAGAGCCTCCGGAA
AAAGAATCTCCTCTGCCAGTCAAAATCAAACCAATGCTATTTCCTGACAAGCAATCAAGA
AAATCCATTGGAAAGTCAGAGCTAAGGAGGAGTATAAAACACAAGGAAAACGAGAAAAAT
CTCGACAGTATTATAGATCCAGGAGACTTGCTTGATCGAATAGAGGTTCTCGATTTTATC
GCTTTTACGACAGCAAAAGACGAAGGATCGGCAATCATGGCCGGTTGCATTGATGCTCTT
ATCGTGTACGCTGCTGAAAACAAAAAAAATTTACTGTATTACGAAGCCTTTCTCACAACA
TATAGATCTTTCATAACGCCGATGGAACTCTTGAAAAAGCTCTTATATAGATATCCTTTA
AAAATATGAGTATGAAAAGTTTGGAAAAGACGAAAACAGAGAATACCAGCGAGCTAGTCG
GAATTCTTTTTTTTTGCTGCTTCGAGTCGTCGATGAGTTAAGTCTGGTCGACATATCAGA
CAAGATCTTAGAGCTTTTGATGCAGCTCGTCTATCAACTCCTGTTCGATGGCAACCTAAC
ACTTGCTAAACTTTTACGCACAAAAATCCTCGCCAAGCATCAACACAGATTGTCGAATAT
CGCCGACAGCATTATGGGACCGCTAGCCTCACTCAGAATTTCATCAAAAGTTATGACGGT
CATGGATTTCAGTAGTGAGAGACTGGCTGAACAAATGACCATGCTTGATTTTGATTTATT
TCAGAAAATTGAGATACCAGAAGTTTTGCAATGGGCAAAGGAGCAGTCCGAAGAGCTTTC
TCCACATCTAACCGCCTTCACTGAGCATTTCAATAAAATGTCGTACTGGACACGAACTAT
AATACTCAATCAAGATAAACCACAGGATCGGGAAAAACTTTTGAATAAATTTATCAGAAT
TATGCGGCATTTACGACATAAACTCAACAACTTCAACTCATACCTCGCCATATTGTCTGC
CCTTGATTCTGCCCCTGTCCGTCGATTGGAATGGCAGAGGCAGACTACAGATGGCCTGCG
AGAGTATTGTCAACTTATCGACAGTTCTAGCTCTTTTAGAACTTACAGGGAAGCGCTCGG
CGAAGCCTCTCCGCCTTGCATTCCATACTTGGGCCTGATACTTCAAGATCTAACCTTCAT
TCATCTCGGCAATAAAGATGAGCTTCGGCCGGGCGTTATAAACTTCAGGAAAAGATGGCA
GCAGTTCAATATTCTCGACAGCATGCGACGTTTTAAGCAAAGCCAATATCTGATTGAAAA
AGACCAAAACATGATTGACATGTTTGATAATTTCAATAACCACTTAGCCGAAGATGCATT
GTGGGATCTTTCACTTAAGATTAAGCCGAGAGTAAAGAGACCGAAACGAATCCATGTCAC
AGAAGATACATCCAGCAGAAGAAGTTCCACAATCACGACTGATTCTACTTCAACATCGGA
GGTTGCTAATGGTCATAGTTAAATACCTGATTGAGAGATCAAACTTAAAACGTGTAAGAA
AAAGGCCCAGACCCCTTCGTACCTCTTGAAGTGTGAAAATGTATCTCAGGTGGTGCCTGT
ACCTGGGAACCTCTAAATTAAAGGAAGTTTTGTCTGCAAGATTTTAATTTATCTAGTACA
GTATAACTTAATTTTGAACCTGTTGTAGTGTCAAAATGTCAGATGTTAAAATGCAGTTAA
TGGAATCTGTTTGCTTAAGATTATGTTAAAATACCAGAGATACCTTGGCTGTTTGTGACA
ACCGAAAAATTTATCAAGTAGAGACAACTTACTCATCAGTGAAACTTTAGTTCATGTGTG
AGTGCAATGATATCTTCTTATCGATTATCCTTATGCTAAAATCAAACATCGATCATATTA
AAACATGCTTTAGAAGTGGTAAGAAATTGCTGAGACTTATGTACTGGAACATGTACATTT
CTGTATTGTGGTTAGCGAATATTGTCAATGTGGCATTCCGGATTCACTGCAATCTAACAT
TTTAGTGACAATTTCATATTACCTGTTTCGTAATTGTAAGTCACTTGTATAGATATTTAT
GCATATGTGTCAAGGGACGTGCAATATTATTGTTACTTGGTATGTCAACGTGTTACTGCT
AAGTTATATAGCAGGGCACAGTTTGCCCGAGTGACCGGTGAAATAGTGAAAATTAATTTT
GCGGTGTCGGGTGCACAAATTGAGAATTCTATTCAGACATACATTTTCCCGCAAAATATG
TTTATGCGTTCCCATTGCCATACTTACTTGTGCATTTTATCCAAACTCGAAGCGTTATCG
AACTTATTTTTATGTACTTGCATGAGTTGTGGAAGGAGCATGAATTTTAAATTCTCTTTC
ATCCTTCCTCAGAATTCTAATGATATTATTCAAGAACAGACTCGACTACATTTCATTCTA
TTATACTGTATTTCTTTAAACATTAATAATAATTTGCATCGGTTGGTTGGTGTATGATCC
CCAACAACATTAATATTGTATGTGCATAGTAACGATAAGAGTAGGCGATGTTCTCATTAC
ATTGTCAGTGTACTGCGAGACATTTGTATCGTACTTGTACCTAGAGCGAATTGAAATTTG
ATGCAGAAATTCTACACCTACTCTGTAACACATTTGAAAGTACTTTATCCAAGTACTACA
TCTGTCACTGGTTGTATGCCAATTATTATTGGGTTACCAGTGTCCGTGAACCTATATCCA
CTGAACATTTTAGCCGAGGTCATGCGTGAAATTTTTTATTGATGCTGCTAGAAATATCTT
TCCTATTCACATGAAATGACTTCCTTCACACAATATACACATAAAACAAAATTTGCCGGC
CATTGAAAACCTATACCAAGCTAGGAAATGTGTCTGGCCGATGCAAAAACTATCATGCAA
CCTCCTGCAACAAAATTATCTCACGTGATTCATCTCTCGTCATGTTTTCCATACTGTATG
TTTTTGGCCAAGAGTTGATTCTACTGATTCTCTACGAAAATTCTGTTTTTTTGAATCATT
GATTTGGCATTACCAATGTGAGACACCTCAACATTGACCATGTAAAAAAATTATTTTGTG
GAGGCTAAACTGAATAACAACCACATTTGGTAAGAAACCCTGAACCTGTTCATCTCACAA
GTGTGAAAAGTACCTCACAACGCATGCTTTTAGATGCTGTTCTGCTCGGACAGTAATAGC
GATAGTTTATAGTATTCTCTTATTCTTTTACTTAGATCGCATAAATAGCAATGTTTTTTT
AGCTCCTTTTTTTAAGTATTTTCGCTTCCACCAACATTCTTACTAGAGACCAATTGTGTT
GTGCATGCGTTTTTGCATGAATTAAATATTTACTCTATGCGATTCCTTGAACAATTTTTA
AGGAACTTATTATGTTAACTTCAAGACTCGTTTTCACCGCCACATTTAATTTTTGTATTT
TGTCATTCATTATTGCACTGTTAATGTGGATTGACTAATGTGATCACACATAAATTTTGT
CCTGTCTTTATATCAGTTGATCTATT

InterProScan

SUPERFAMILY
Ras_GEF_dom_sf (IPR023578) - T[734-800] 5.23E-10
ProSiteProfiles
Ras-like_Gua-exchang_fac_N (IPR000651) - T[748-802] 17.882
Pfam
Ras-like_Gua-exchang_fac_N (IPR000651) - T[752-798] 3.1E-8
CDD
Ras-like_Gua-exchang_fac_N (IPR000651) - T[757-798] 3.10746E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPGF1_HUMAN 29.975 % 94 1.3E-19





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