- Clone 'cien53792' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S21.g08258.01.t
Possible name(s)
MTF2; PHF1; PHF19
Gene model
Location
S21 [190,264 / 195,079]
Amino acid sequence
Length: 902
>Harore.CG.MTP2014.S21.g08258.01.p
MHDLQQLCIHNYLLGDRGIDYIRSSNGEMVRNKNTSSTSPTAQHFTVASAVVNRGTAYQL
NSKYSKAVSYIDSKEDPQNSAAAMSLRSSLSSSEISDLALSRLQKSDEKGHSDVIAYNGN
SALSEESLSNGLIEIATTTTNGTAKLNCFTSIVTAIGKGKPENSFDGLRCTGFIVNGAAV
SAKDTSNDIQMTVKKEKRSPHKLNIAPDLCKQNMKNKKYKPTIDGHISRMKAQANIYRKM
FGVFKPGEELLARWSDGLYYLGMILNVDDYTHKCFMRFEDESSFWVHFKDLHHMSNTTAT
ENEETGVEDEHELDKEDSDVTCFLCRDGVSDPPNEIVICDKCGQGYHQLCHMPHIDTSIL
KDEEVPWQCRTCVFAACVRRGGAIKHGIGDAMRQMKQVLPYEISSLTWIKNNKLNTEEIY
CYCGGPGDWYLKMLQCARCNQWFHEACLQCLDAPILYGDRFFLFVCSICNNGKEYVKRLP
LKWVDICHLILYNITIAKKIKYYDITDFIVPFFNKNFDALRLGELAKDVATRSLLKQKIM
ETLQSNKSRFQCGSECKKTKVVWGLRNRSPPIPPTIFLPHGIEINDESLSTLDLKHGSAS
LSDSPTPLKKQGPCQVTNSTSPISKQTLSCLSNGRSPVKDLVKSGLFNLKSSIEASQNDF
YQSDNMPPPKRKRGRPKKRPFESTTMTRKRSSSISSLTSSSSLSKQSFAESRKRKRKFSD
ASRDSVGSSRGSDVGLSKIWALNNAVLNDETSSCSSGSLERNNDCNTLRETIARYFGAEG
RVECGERFRVCGKRVMRASDGTERHEYLIEWEGYTADSPVSFSCYYSWLQLLLMIIMSFS
DYNQETIINTRMDSLCFSGICSQISFLTLLLPKLYHFRPGKLVIGSSFMNLSCLFSILIV
LS
Nucleotide sequence
Length: 2,872
>Harore.CG.MTP2014.S21.g08258.01.t
GTAACTGATGGAATATTTTATTTTGTTAGGTGTCCTGTTGTCTATAAAATTTAATAATTC
AGAAGAAAATGAATGAGTAAATAGTCCCCTGCAATCATGCATGACCTACAGCAATTATGC
ATTCATAATTACCTTCTTGGAGATCGTGGTATTGATTACATTAGGAGCTCGAATGGTGAG
ATGGTTCGAAATAAAAACACTTCCTCTACTAGTCCGACGGCTCAGCATTTCACAGTCGCA
TCAGCAGTGGTTAATAGAGGGACGGCCTATCAGCTAAATTCAAAATATTCTAAAGCTGTC
TCTTACATTGATTCAAAAGAAGATCCACAAAACTCAGCGGCTGCCATGTCTCTGCGTTCC
TCATTATCGTCTTCTGAGATATCGGACCTGGCACTGTCACGCCTGCAAAAATCCGATGAG
AAGGGGCATAGCGACGTAATCGCGTATAATGGAAACTCCGCTCTATCTGAGGAATCACTT
TCAAACGGTTTGATAGAAATTGCAACGACCACAACGAATGGAACTGCCAAACTGAACTGC
TTTACTAGCATAGTCACTGCGATCGGTAAAGGCAAACCTGAAAATTCTTTCGATGGTCTT
AGATGCACCGGATTTATAGTTAACGGGGCTGCTGTTTCTGCGAAAGATACTTCGAACGAT
ATTCAGATGACTGTTAAAAAGGAGAAAAGATCACCTCACAAACTGAATATTGCTCCTGAT
CTTTGCAAACAAAATATGAAAAACAAGAAATACAAACCGACAATCGACGGTCACATATCT
CGTATGAAAGCCCAGGCAAATATATATCGTAAAATGTTTGGAGTATTCAAGCCGGGAGAA
GAGTTGCTAGCCAGGTGGTCGGATGGCTTGTATTATCTCGGGATGATATTAAATGTGGAC
GATTACACACACAAATGTTTTATGCGCTTCGAAGATGAATCAAGCTTTTGGGTGCATTTC
AAAGACCTCCATCATATGAGCAACACTACAGCTACAGAGAACGAGGAAACTGGTGTTGAA
GACGAACATGAATTAGATAAAGAGGATTCTGATGTCACTTGTTTTCTCTGTAGGGATGGT
GTCTCAGATCCGCCCAATGAGATAGTTATATGTGATAAATGTGGACAAGGCTATCATCAG
CTTTGCCATATGCCACACATTGACACTTCCATACTGAAAGATGAAGAGGTCCCATGGCAA
TGCAGGACTTGTGTATTTGCAGCTTGTGTACGAAGGGGAGGTGCAATTAAACATGGCATT
GGAGATGCAATGCGTCAGATGAAGCAAGTTTTGCCGTACGAGATCAGCTCCCTCACATGG
ATAAAAAATAACAAACTGAACACGGAGGAGATTTACTGCTATTGTGGTGGACCTGGAGAT
TGGTATCTGAAAATGCTCCAATGTGCCAGGTGTAATCAGTGGTTCCATGAAGCTTGTCTT
CAATGCCTCGATGCTCCAATTTTATACGGAGACAGGTTCTTTCTCTTTGTGTGTTCCATC
TGCAACAATGGTAAAGAATACGTCAAACGACTGCCACTCAAATGGGTTGATATCTGCCAT
CTCATACTCTACAACATAACAATTGCAAAAAAAATCAAATACTACGATATTACCGACTTT
ATCGTACCTTTCTTCAATAAAAACTTCGATGCATTGCGTCTGGGAGAGTTGGCCAAGGAT
GTGGCCACAAGATCTTTGCTGAAACAGAAGATAATGGAAACACTTCAGAGTAACAAATCA
AGATTCCAATGCGGGAGTGAATGCAAAAAGACAAAAGTAGTTTGGGGTTTGAGAAACCGG
TCCCCACCTATCCCGCCTACTATCTTTTTGCCACATGGCATTGAGATAAACGACGAATCC
CTGTCCACCCTCGATCTCAAGCATGGATCAGCATCATTGAGTGACTCTCCTACACCTCTG
AAGAAGCAGGGACCATGCCAAGTTACGAACAGCACTTCACCTATCAGCAAGCAAACCCTA
TCTTGTTTGAGCAATGGCAGAAGTCCAGTGAAAGATTTAGTAAAAAGTGGCCTCTTTAAT
CTGAAATCCTCAATAGAAGCTTCACAAAATGATTTCTACCAAAGTGATAACATGCCACCA
CCTAAACGAAAAAGGGGAAGGCCGAAGAAACGACCCTTTGAGAGCACCACAATGACTAGA
AAACGTTCATCTTCAATTTCTTCCTTGACGTCTTCCAGTAGTCTTTCGAAACAAAGCTTT
GCAGAATCACGGAAAAGAAAAAGAAAATTCTCCGATGCGTCTCGAGATTCTGTAGGATCT
TCAAGAGGTTCAGACGTGGGTTTGTCCAAAATATGGGCTCTGAACAACGCTGTTTTGAAT
GATGAAACTTCCTCCTGTTCTTCTGGCAGCTTGGAGAGAAACAATGATTGTAACACGCTT
CGGGAAACCATAGCTCGGTACTTCGGCGCCGAGGGTAGGGTGGAATGTGGTGAAAGGTTT
AGGGTATGTGGCAAGCGAGTGATGCGGGCCAGCGATGGCACAGAACGTCACGAATATCTC
ATTGAATGGGAAGGTTATACTGCGGATTCGCCAGTTTCTTTTAGTTGTTATTATTCTTGG
CTTCAACTTCTTCTGATGATCATAATGTCTTTTTCCGACTATAACCAAGAAACAATCATC
AACACTAGAATGGATTCCTTGTGCTTTTCCGGCATATGCAGTCAAATTTCATTCCTTACT
TTGCTACTGCCTAAGTTATATCACTTCCGGCCTGGAAAACTTGTAATTGGAAGTTCTTTT
ATGAACCTGTCTTGTCTTTTTTCTATTTTAATTGTTTTATCTTAATGTATTCAATTTTGG
GCTCGGTTTGCTTGGATTCAGAAGAGTCAATAAAGGAAAAAATAGGAAGCGA
| SMART |
Tudor (IPR002999) - T[242-299] 1.3E-5 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[308-380] 5.98E-15 - T[414-486] 5.76E-14 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[315-375] 1.2E-15 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[319-375] 9.748 |
| SMART |
Znf_PHD (IPR001965) - T[321-373] 1.1E-8 - T[420-470] 1.1E-4 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[322-372] . - T[421-469] . |
| Pfam |
Znf_PHD-finger (IPR019787) - T[322-373] 1.3E-9 |
| Pfam |
Mtf2_C_dom (IPR025894) - T[766-815] 5.9E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTF2_HUMAN | 36.799 % | 387 | 3.89E-124 |
| PHF19_HUMAN | 35.382 % | 349 | 1.16E-109 |
| PHF1_HUMAN | 43.976 % | 289 | 3.02E-87 |