Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cima876069' > 
  2. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S221.g10564.01.t

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

Harore.CG.MTP2014.S221.g10564

Location

S221 [126,981 / 128,927]

Sequences

Amino acid sequence

Length: 470

>Harore.CG.MTP2014.S221.g10564.01.p
MALRVFRSCFNKLNSAGRLPIKASYSTAGEENRVCTMIPGDGIGPEISAAVQKIVQASGA
PIQWEERDVMAVKGPGGRWVIPNAAEESIKKHKVGLKGPLGTPIGAGHPSMNLLLRKTFG
LYANVRPCVSVEGFKTPYDNVDIVTIRENTEGEYSGIEHIIVEGVVQSIKLITETASRNV
AEFAFEYARQNGRKTVTAVHKANIMRMSDGLFLRCCRETAEKNRDIKFNEMYLDTVCLNM
VQDPNHFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGADGVAIFESVHGTAPDIAGK
DLANPTALLLSCAMMLKHIGKVNYGKRIEKACFETIKDKKSRTKDLGGDATCSYFTDEVC
RRVKDLISREYIVYIKYIGKQKIFLQLLQLSQDYERVVLALEITGAGQNNCKVENFITVS
LQAPMQRLIAMKYMAGCTQLIVFKIQFSRSLFQNDYGFSVIHFRTCSHGT

Nucleotide sequence

Length: 1,413

>Harore.CG.MTP2014.S221.g10564.01.t
ATGGCGTTAAGAGTATTCAGATCCTGTTTTAATAAGCTAAACTCTGCGGGTCGTTTACCC
ATAAAGGCATCGTACTCGACTGCTGGCGAGGAAAATCGGGTGTGCACTATGATACCGGGT
GACGGAATCGGTCCAGAAATCTCTGCAGCCGTGCAGAAGATTGTCCAAGCTTCTGGAGCT
CCTATCCAATGGGAGGAAAGAGACGTAATGGCTGTCAAGGGCCCGGGAGGAAGATGGGTT
ATTCCCAATGCTGCCGAAGAGTCAATAAAAAAACACAAAGTGGGTCTGAAGGGCCCTCTG
GGAACCCCAATCGGAGCGGGCCACCCCTCTATGAATTTGCTTCTGAGGAAAACATTTGGG
CTCTACGCTAACGTTCGTCCTTGCGTCTCTGTGGAGGGGTTCAAGACGCCGTATGACAAC
GTGGATATCGTGACCATCCGAGAAAACACAGAAGGAGAATATTCCGGAATAGAACACATC
ATTGTGGAGGGTGTGGTGCAAAGCATCAAGCTGATAACTGAAACAGCCTCCCGCAACGTG
GCAGAATTTGCGTTTGAATACGCCAGGCAGAACGGTCGCAAAACGGTCACTGCGGTACAT
AAAGCAAATATAATGCGCATGTCCGACGGCCTCTTCCTTCGGTGTTGCAGAGAGACTGCT
GAAAAAAATCGGGATATCAAGTTCAACGAGATGTATCTAGATACGGTCTGCCTCAACATG
GTTCAAGACCCTAACCATTTCGATGTCCTGGTCATGCCCAATTTATACGGTGACATCCTC
AGTGACCTTTGTGCCGGGCTTATTGGTGGTCTAGGCGTAACTCCGAGCGGAAACATAGGT
GCTGACGGTGTTGCCATCTTTGAATCCGTTCACGGTACTGCTCCGGACATCGCTGGTAAA
GATCTTGCCAATCCCACCGCCTTACTCTTGTCTTGTGCGATGATGCTCAAGCACATAGGC
AAAGTCAACTATGGAAAACGAATTGAAAAGGCTTGTTTCGAAACCATCAAGGACAAGAAG
TCTAGAACGAAAGATCTTGGCGGCGACGCTACTTGCTCTTATTTCACTGATGAGGTTTGC
AGAAGAGTCAAGGACCTAATAAGTAGAGAATATATAGTTTACATAAAGTATATCGGCAAA
CAGAAAATTTTTCTACAGCTACTACAGCTCTCCCAAGATTATGAGCGAGTGGTACTTGCG
CTTGAGATAACAGGAGCGGGACAGAATAATTGTAAGGTAGAGAATTTTATAACTGTTTCT
CTACAAGCACCAATGCAAAGGTTAATAGCAATGAAATATATGGCAGGATGTACTCAGCTA
ATTGTATTTAAGATACAATTTTCTAGATCCTTATTCCAAAATGATTATGGTTTTTCAGTC
ATTCACTTCAGGACATGTTCTCATGGAACATAA

InterProScan

TIGRFAM
Isocitrate_DH_NAD (IPR004434) - T[33-363] 3.9E-147
SMART
IsoPropMal-DH-like_dom (IPR024084) - T[33-359] 4.3E-164
Pfam
IsoPropMal-DH-like_dom (IPR024084) - T[36-359] 3.2E-103
ProSitePatterns
IsoCit/isopropylmalate_DH_CS (IPR019818) - T[254-273] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
IDH3G_HUMAN 42.733 % 276 8.66E-89
IDH3B_HUMAN 42.683 % 265 8.46E-85
IDH3A_HUMAN 79.341 % 561 0