- Transcript 'KH2012:KH.C14.467.v1...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S224.g14038.01.t
Possible name(s)
DAW1; WDR1; WDR55
Gene model
Location
S224 [23,144 / 28,840]
Amino acid sequence
Length: 513
>Harore.CG.MTP2014.S224.g14038.01.p
MLSKLFNSSNGKKPQYYNNMNDNYTIIIPDAVPNSSIVGKLYITSYLISISINCATKKMS
SGSRDLHGKYVSSKIANHFFPPVFKNYLPQNVISCCTFATCTNINKISISYLSEEEEEEE
EEEDVLPTHPRWVRGSANFADFSFHPSKYDLATVNMDGYLEVYKLDPGQESCRVLSKRLS
KKPCRCVKYSKNGDDVVVANKSGSVKLVDIQTEKYKQELISLADSECPSNCLLVINQNLI
ASGDDEGTLKIWDIRKGKQPIMEEDRCHDYISDIAVDSNGKFLFVTSGDGTMITYNVKRR
KFIVQSETADHDMGCVEVMKNNKKVVVGTCEGHLLLYNWEEFAASSDRFPGHPASVDCLV
RINENVLCTGSMDGMIRAVHILPNRFLGVIGEHHMPVHKMAVSHDAMFLASSSHFPIIKF
WTVDDLHRTNVKGNAKPKKNLKTKKLVKSGISGDKLSFISDLDQDINIPTVNTSNSESDE
STSEDEDVNDNVTAKITGDVRLNQQEAENRQDL
Nucleotide sequence
Length: 2,391
>Harore.CG.MTP2014.S224.g14038.01.t
ATGTTATCTAAATTATTCAACTCTTCAAATGGAAAAAAACCTCAATACTACAACAATATG
AACGACAACTACACAATAATTATACCTGACGCTGTTCCGAATTCTTCAATCGTTGGAAAG
CTGTATATTACCTCTTATTTAATATCAATATCAATTAACTGTGCCACCAAAAAGATGAGT
TCAGGATCCAGAGACTTACATGGCAAATATGTTTCGAGCAAAATCGCCAATCACTTTTTT
CCCCCAGTGTTCAAAAACTATTTGCCTCAAAATGTCATTTCATGCTGTACATTTGCTACC
TGTACAAATATTAATAAAATATCTATCTCCTATCTTAGTGAGGAAGAGGAAGAGGAGGAG
GAGGAAGAAGATGTATTGCCTACTCATCCGAGATGGGTTCGAGGTTCTGCTAATTTTGCA
GATTTTTCCTTTCACCCTTCTAAATATGATCTTGCCACTGTGAACATGGATGGATATTTA
GAAGTGTATAAATTAGATCCAGGTCAGGAATCTTGCCGCGTCCTTAGTAAACGATTGAGC
AAAAAACCCTGCAGATGTGTGAAATATTCTAAGAATGGCGATGATGTCGTTGTAGCGAAC
AAATCTGGGAGTGTGAAGTTAGTCGATATTCAGACTGAAAAATATAAACAAGAGTTAATA
TCTTTGGCTGACAGTGAGTGCCCATCTAATTGCCTTTTAGTCATCAATCAAAATTTGATT
GCAAGTGGGGATGATGAAGGAACATTAAAGATCTGGGATATAAGAAAAGGAAAGCAACCC
ATCATGGAGGAAGATCGTTGCCATGATTACATCAGTGATATTGCGGTGGATAGCAATGGG
AAATTCCTTTTTGTCACAAGCGGTGATGGAACCATGATAACATATAATGTCAAGAGAAGA
AAGTTCATTGTTCAGTCAGAAACCGCAGACCATGATATGGGTTGTGTTGAAGTTATGAAG
AACAATAAGAAGGTCGTTGTGGGCACATGTGAGGGACATCTCCTGCTTTACAATTGGGAA
GAATTCGCTGCATCTTCCGATCGATTTCCGGGGCATCCTGCATCGGTTGACTGTCTTGTA
CGAATAAATGAAAATGTCTTATGCACAGGTTCCATGGATGGGATGATACGAGCTGTTCAC
ATTCTTCCAAACCGATTTCTTGGTGTCATCGGTGAGCATCACATGCCTGTGCACAAGATG
GCAGTGTCACACGATGCAATGTTTTTAGCAAGTTCCTCCCATTTTCCTATTATCAAATTT
TGGACTGTTGACGACCTTCATCGAACCAACGTTAAGGGAAATGCCAAACCCAAGAAAAAT
TTAAAAACCAAGAAACTCGTAAAATCTGGAATATCAGGTGATAAACTCTCTTTCATATCT
GATCTGGACCAGGATATTAACATTCCGACTGTCAACACTTCCAATTCTGAGAGTGATGAA
TCTACGAGTGAAGATGAAGATGTTAATGACAATGTTACAGCAAAAATTACTGGAGATGTT
AGGTTAAATCAGCAAGAGGCTGAGAACAGACAAGACTTGTAGATGGAATAACTTAACTTT
CTTAACTGCTTACAGATTTTGACTACTGGATTTAATAACATTTCTGATAGGCAATTGTTT
CGTGAAACTAACCCCTTACAGTGAGAAATAACGAAAGGTTGTAAAAAATTATATGGTGAC
ATGTTTCAACTATTATATAATAAGTGCAAAATAGGCAGTAGTCACAAAAACGGCAGTTCT
TTTGGTAGCATATTCAGATTTTCCAGAATATGTAAAGAGGTGCTCTGGAAAAAAATGTCT
GAAACAAATGTATGTGAGTTCAAAGTCCTTCACTTACGGAAAAAGTGGAAGTATTTCGTG
TTTTTTTTCCTATTTGAGATTCTGGTAAAGGCTACAAATATTGAGAAAGTCTTCAAATTT
TTGTAGCCTGTAATCACAAATTATGCTCATGATATATGTGTTTCATATATATTGCTGCAC
TTTCAGTACTGAACAGTGTACGAATAGTTAATTATTTATCAGGACTGTGGAGTTGAAAGC
AATCCTTAGGTTACTATAGTCAGTAAAATATGGCAACTCGACTTTTCAGGATTTTTTTTA
CATTGAGCTCTGGTTTCAAAATTTCTTAATATAACTGTACTTATTAATGCTGATTGAAAC
ACTAGGCAGAAATCCACAATGAAAAAACCAACCACAACACATGGGAACTATTGTCAGTGT
CATGGTGAAATGCAATGTGATGCAAAAATAAGTAATTTATAGAAAACAGTAACATTGCAA
CTACAAGGCCATTTAATTCTTTATAAACATGGTTGGGAGCCAGTAAAGAACCTGTACAAC
TTTAAAAAAAATTGTTCATAAAGTTCTACACAATTTCTTTTATATTTGCAG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[84-307] 1.8E-27 - T[308-508] 1.1E-12 |
| SMART |
WD40_repeat (IPR001680) - T[119-164] 480.0 - T[168-209] 4.6 - T[215-253] 1.6 - T[257-296] 2.6 - T[342-380] 31.0 - T[383-422] 8.1 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[132-431] 17.218 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[141-425] 4.07E-43 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[236-262] 9.005 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR55_HUMAN | 37.176 % | 223 | 7.39E-68 |