- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S225.g11214.01.t
Possible name(s)
AC092835.1; ZNF525; ZNF567
Gene model
Location
S225 [89,295 / 106,397]
Amino acid sequence
Length: 611
>Harore.CG.MTP2014.S225.g11214.01.p
MATKTSSNPGIFHLSPKSEKMVVQCNVHPSRTLEKLNKQRLASSFTDVTVIVSGQHFSVH
KALLAAHSSVFCTVLQDSSLSQTTPNINLDGVESEYFSIILDFIYTSKLCATPTNVDQLH
STALFLQMQEVIDLCNKFKFSQKEVTDPIIHEVVVRLGDERKSETEKDSEILKQTMNTDE
IQFQDKDSNNMMVEVFRSSEMEDVIDDRSQRDEEYIDVIQQSETNSMGTKKLKKRGRKPQ
KRVTCEVCSRVMTKTKYEIHKRMHTGEKPYSCNDCGKQFVSIHNQRIHERIHTGERPYHC
NLCDKAFADPSTIRKHRLWHAGVKNKLCGMCGKYFATLTQVREHMRTHTKEKPYVCTECD
KAYRYRCDLKRHMTEHTGNLIGPCNECGKYFNHRGNFLSHLRTHRKRNNSPLKLQDSGLV
TSDGRIILKAKICDEALASAMLVVPAQQQSGSHRNVHDATNQQSSSGMTSQNHQDSTSSD
VLKVHDLSQTVTDGGIEVTINNGKFYVNQTRSGLSEENGFLSESANEIILKEEDDITVAT
ATASTSSQGQLFGQQCETSLTADHVLMLVQDTQNLSEIRPSSKNANPHSRNDIIITDEHD
ESLVIVDPNMT
Nucleotide sequence
Length: 2,100
>Harore.CG.MTP2014.S225.g11214.01.t
TATTTAGCATACTTACTCTGCCAAGTATTATTGCATAAGATTTAGTTCCTTCCATTAGAT
GTCTTCTTAGTTTGAAATCGTGATATCCAAGTACAAGAAACAAGCCGCCGATCGTTGCTC
CATATTTCAGGATATTGAATGGCTACAAAAACATCCAGCAATCCTGGGATTTTCCATCTC
TCTCCCAAATCTGAAAAAATGGTTGTTCAATGCAATGTTCATCCTTCACGAACTCTTGAA
AAACTTAACAAGCAACGACTCGCTTCGTCTTTTACTGATGTAACAGTTATTGTGTCTGGT
CAACATTTTTCAGTACATAAAGCTCTTCTCGCTGCTCATAGTTCTGTGTTTTGCACAGTC
TTGCAGGATTCTTCATTAAGCCAGACCACACCGAATATAAATCTCGACGGAGTCGAGTCT
GAATATTTTTCGATCATACTCGACTTCATATACACATCGAAACTGTGTGCCACACCCACA
AATGTCGACCAATTGCATTCGACCGCTTTATTTCTTCAAATGCAAGAGGTCATTGATCTT
TGCAATAAATTCAAGTTCTCTCAGAAAGAAGTAACGGATCCAATTATTCATGAAGTCGTC
GTAAGACTCGGAGATGAAAGAAAGTCTGAGACGGAAAAAGATTCAGAGATATTAAAACAA
ACAATGAATACTGATGAAATTCAATTTCAAGATAAAGATTCAAATAACATGATGGTTGAA
GTCTTCAGATCTTCAGAGATGGAGGATGTTATAGATGACAGATCACAACGTGATGAAGAA
TACATTGATGTCATTCAACAATCCGAAACTAATAGTATGGGTACTAAAAAATTAAAGAAA
AGAGGAAGAAAACCCCAAAAACGAGTGACTTGCGAAGTTTGTTCAAGAGTTATGACAAAG
ACGAAATATGAGATTCATAAACGAATGCATACAGGTGAAAAACCTTATTCATGCAATGAT
TGCGGAAAACAATTCGTCAGTATTCATAATCAAAGAATACATGAAAGAATTCATACAGGA
GAACGTCCGTACCATTGCAATCTCTGCGACAAAGCTTTCGCGGATCCATCGACGATCCGA
AAACATAGACTATGGCACGCCGGAGTCAAGAATAAACTCTGCGGAATGTGTGGAAAATAT
TTTGCAACATTAACTCAAGTTAGAGAACATATGAGAACTCATACAAAGGAGAAACCGTAT
GTATGCACGGAATGTGACAAAGCTTATCGCTACAGATGCGATCTTAAAAGACATATGACT
GAACATACCGGAAATCTGATCGGTCCGTGCAACGAATGTGGAAAATATTTTAATCACAGA
GGAAATTTTCTATCTCATTTGAGAACTCACAGAAAACGTAATAATTCTCCTCTCAAATTG
CAGGATAGCGGACTTGTAACTTCAGATGGAAGAATTATTCTAAAGGCGAAGATTTGTGAT
GAAGCTCTCGCATCTGCAATGCTTGTGGTCCCTGCCCAGCAACAGTCTGGTAGTCATAGA
AATGTTCATGATGCAACAAACCAGCAGTCGTCTTCGGGAATGACATCACAAAATCACCAA
GACAGCACATCTTCTGATGTATTGAAGGTTCATGACCTCTCACAGACTGTTACTGATGGT
GGAATAGAAGTGACAATAAATAATGGAAAATTTTATGTCAATCAAACGAGAAGCGGATTG
AGTGAGGAAAACGGATTCCTGTCAGAGAGCGCAAACGAGATTATTTTGAAAGAAGAAGAT
GACATCACAGTGGCCACGGCAACAGCTTCGACAAGTTCACAGGGTCAACTGTTTGGACAA
CAATGTGAAACTTCATTGACTGCTGACCATGTTCTCATGCTTGTTCAAGACACACAGAAT
CTGAGTGAAATTCGTCCATCTTCTAAAAATGCAAATCCACATTCTCGGAATGACATCATA
ATAACAGATGAACATGATGAGTCGCTTGTCATCGTTGACCCGAATATGACATGACATATT
CTTTTTCTCCTGCAAGGGATAGATTTTATTTTGTTGTTGATTGGTTGTAAAGTAAAAGGT
GATATCGAAAGACTGTTGAATACTGAGTTTATACTGGTTTTAGTATTATTTTAGTCATTT
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[22-138] 9.81E-30 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[36-138] 6.5E-24 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[46-113] 17.19 |
| SMART |
BTB/POZ_dom (IPR000210) - T[46-143] 5.7E-25 |
| SMART |
Znf_C2H2_type (IPR013087) - T[243-264] 18.0 - T[270-292] 0.047 - T[298-320] 1.4 - T[326-348] 0.15 - T[354-376] 0.0025 - T[382-404] 0.014 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[254-307] 1.61E-18 - T[306-363] 8.88E-16 - T[348-400] 4.1E-14 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[270-297] 15.625 - T[298-325] 11.822 - T[326-353] 13.692 - T[354-381] 11.884 - T[382-409] 11.157 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[272-292] . - T[300-320] . - T[328-348] . - T[356-376] . - T[384-404] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN567_HUMAN | 45.294 % | 154 | 6.83E-40 |
| ZN845_HUMAN | 45.882 % | 155 | 1.21E-39 |
| ZNF83_HUMAN | 37.838 % | 151 | 1.36E-39 |