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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S22.g14468.01.t

Possible name(s)

MRPL40

Location

S22 [120,322 / 121,486]

Sequences

Amino acid sequence

Length: 189

>Harore.CG.MTP2014.S22.g14468.01.p
MSLLVVQNTILPPSRMIKVCSTITRSISSSAVQNAGFQGKQGQNYSPEQRQTIMERKKRL
IRKLENVPLEMKPIKDFYIPYSWSVPDLIRDLPSLTEEEKEERILLKKEWSTYVLTCKKM
DDTKFKELVNSQSKALSELKKESEELYDAAIECDANLLPFTHKGPVETPPIKGFMPPLGS
YVENSETFD

Nucleotide sequence

Length: 731

>Harore.CG.MTP2014.S22.g14468.01.t
CAGAGATTGAAGTTCACGTCAATCATGTTTACTATTTTTTTGTAATTGCGTCCTCGTCCC
TAAGCTTAGCATGTCGTTATTAGTAGTTCAAAATACAATTTTACCCCCTTCACGAATGAT
AAAAGTATGTAGCACTATCACACGTTCGATATCCTCATCTGCTGTTCAAAATGCTGGCTT
TCAAGGAAAACAGGGACAGAATTATTCGCCGGAGCAAAGACAAACCATAATGGAAAGAAA
AAAACGCCTCATTCGTAAACTAGAAAATGTGCCGCTTGAAATGAAACCCATAAAAGATTT
TTATATACCGTATAGCTGGAGTGTACCTGATTTGATACGTGATCTACCTTCCTTAACAGA
AGAGGAGAAAGAAGAAAGGATATTACTTAAAAAAGAGTGGTCGACCTATGTTCTAACCTG
TAAAAAAATGGATGACACAAAATTTAAAGAACTTGTAAACTCACAGTCAAAAGCATTGTC
TGAACTGAAAAAAGAATCAGAAGAACTATACGATGCCGCAATCGAATGCGATGCGAACCT
GCTCCCATTCACGCACAAGGGTCCGGTCGAAACTCCTCCTATCAAAGGGTTCATGCCTCC
ATTGGGGTCTTATGTTGAAAACAGCGAGACTTTTGACTGAGGAATTCAATACTACAGAAT
TCTGAACTAAATAAATCACAAACTTTTTGTTAACTTGTATTTTGTATGCAAATATAATGC
GTAAGAATCAG

InterProScan

Pfam
Ribosomal_L28/L40_mit (IPR019192) - T[50-185] 2.4E-32

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RM40_HUMAN 43.609 % 94.4 2.28E-24