- Transcript 'Cisavi.CG.ENS81.R268...' >
- Transcript 'Harore.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S230.g01020.01.t
Possible name(s)
CDK12; CDK13; CDK9
Gene model
Location
S230 [6,278 / 8,189]
Amino acid sequence
Length: 376
>Harore.CG.MTP2014.S230.g01020.01.p
MSKEAILDFPLCPDVSKYERIAKIGQGTFGEVFKAKDKKTGRLVALKKVIMENEKEGFPI
TALREIKILQLLKHESIVDLIEICRAKPTQYKGSIYLVFELCDHDLAGLLSNATVKFTLG
EIKKMMQQLLEGLFYIHRNKILHRDMKAANILITKKGILKLADFGLARAFSYTKAGQVNR
YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAELWTRSPIMQGETEQTQLKLICQL
CGSITPQVWPSVEKYELYQKFDLPKNQKRKVKERLRAYVKDQYALDLIDKLLCLDPKHRT
DPDEALNHDFFWTEPLPCDLSNMLSQLKTSMFEYLAPPRRPVGHPHHPHQRNNPRPHPAA
PATKQQPTDPSYDRIF
Nucleotide sequence
Length: 1,131
>Harore.CG.MTP2014.S230.g01020.01.t
ATGAGTAAAGAGGCCATCTTAGATTTCCCTCTTTGTCCTGATGTTTCAAAGTATGAGCGG
ATTGCAAAGATCGGACAAGGCACCTTTGGGGAGGTTTTCAAAGCCAAGGATAAAAAAACA
GGAAGGCTCGTCGCATTGAAAAAGGTGATAATGGAAAACGAGAAAGAAGGGTTTCCTATA
ACTGCTCTGCGGGAAATCAAGATTTTGCAGTTGTTGAAACACGAAAGCATCGTGGATCTC
ATCGAAATTTGCAGAGCCAAACCAACACAATATAAAGGTTCCATATACCTTGTTTTTGAA
CTCTGCGATCATGATCTGGCGGGGCTTCTCAGCAATGCTACGGTTAAATTCACACTCGGT
GAAATCAAAAAGATGATGCAGCAGCTGCTCGAAGGATTGTTTTACATTCACCGAAATAAA
ATCCTGCACAGAGACATGAAAGCCGCAAATATATTGATAACGAAAAAGGGAATCTTGAAA
CTTGCTGACTTCGGGCTAGCCAGAGCATTCAGTTACACAAAAGCCGGGCAAGTGAACAGG
TATACCAACAGAGTGGTGACACTGTGGTATAGGCCACCGGAATTGCTACTTGGTGAAAGA
GATTATGGACCACCCATCGATTTGTGGGGTGCAGGATGCATTATGGCTGAGTTGTGGACA
AGGAGTCCCATTATGCAAGGTGAAACAGAACAAACCCAGCTAAAGCTAATCTGCCAGCTT
TGTGGTTCAATAACCCCACAAGTTTGGCCTTCGGTCGAAAAGTACGAGCTCTATCAAAAG
TTCGATTTGCCCAAGAATCAAAAAAGAAAAGTAAAGGAACGCTTGAGAGCTTATGTAAAA
GATCAGTACGCTTTGGACTTGATCGACAAACTTTTGTGTCTCGATCCCAAACATAGAACA
GACCCGGACGAGGCTTTAAATCATGATTTTTTCTGGACTGAACCATTGCCATGTGATCTG
TCAAATATGCTTTCGCAACTTAAAACTTCCATGTTTGAATATTTGGCACCACCAAGAAGA
CCCGTAGGTCACCCCCACCATCCTCATCAAAGAAACAATCCGAGGCCTCATCCAGCTGCC
CCTGCCACAAAACAGCAACCAACCGATCCGAGCTATGACAGAATTTTTTGA
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[14-318] 6.07E-97 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[18-311] 43.693 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[18-311] 3.5E-71 |
| SMART |
Prot_kinase_dom (IPR000719) - T[18-311] 1.0E-90 |
| ProSitePatterns |
Protein_kinase_ATP_BS (IPR017441) - T[24-47] . |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[141-153] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDK9_HUMAN | 72.118 % | 551 | 0 |
| CDK13_HUMAN | 50 % | 297 | 1.31E-90 |
| CDK12_HUMAN | 50.331 % | 299 | 2.65E-91 |