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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S230.g12314.01.t

Possible name(s)

NDUFS4

Gene model

Harore.CG.MTP2014.S230.g12314

Location

S230 [50,712 / 52,896]

Sequences

Amino acid sequence

Length: 194

>Harore.CG.MTP2014.S230.g12314.01.p
MSYLSQFLRLGSASVASRSISTSPSVYGIGFYKNLINKNFREKQEKQKENRKDDDIAKFT
ESGETQIQISEGPADQGVSVLTGVPEEHIVTRRIRIFRPTKNAMQSGIQNMKQWMIEFDT
RERWENPTMGWSSNADPLSNISMAMKFKTKEEAMDFVERQGWSYFVDEPKEKRMMPKSYG
ANFSWDKRTRRAMK

Nucleotide sequence

Length: 1,654

>Harore.CG.MTP2014.S230.g12314.01.t
CGATTAGTTACTTTCCGTACATAGTGTTTCAAAATATATAATTTGTAAGGGATGTCATAT
CTCTCACAGTTCTTACGCCTTGGAAGTGCATCCGTAGCATCGAGGTCCATCAGCACGTCG
CCATCGGTGTACGGCATTGGTTTCTATAAGAATTTGATTAATAAAAATTTCCGTGAAAAG
CAAGAAAAACAAAAGGAAAACAGAAAAGACGATGACATAGCGAAATTCACAGAATCTGGA
GAAACTCAAATCCAGATATCTGAAGGGCCAGCAGATCAAGGTGTCTCAGTACTTACGGGT
GTGCCTGAAGAACATATCGTCACTCGGCGAATTCGTATTTTCCGACCGACAAAAAATGCC
ATGCAGTCGGGAATACAGAATATGAAGCAGTGGATGATTGAGTTTGACACAAGAGAGAGA
TGGGAAAATCCAACAATGGGATGGTCATCAAATGCTGATCCTCTGTCTAACATATCAATG
GCAATGAAATTCAAGACTAAGGAGGAAGCCATGGATTTTGTTGAAAGACAAGGTTGGTCT
TATTTCGTTGATGAACCCAAAGAGAAACGCATGATGCCTAAGTCGTATGGTGCCAACTTT
TCCTGGGACAAGCGCACGAGAAGAGCTATGAAATGATGCCTTGTCTCTTACGACATTTAA
TACGTTGTGTATTTATTATTTTACTATTTCGAAAATTATACTGTTTAAAAGTTCATAGTC
AAAAACTTGGTTGCAAAGAAACACAGTGAAGTTGATTTTAGTGGAAATTAGAGATGTGTA
CCATATGACAATTCACGAATTACAAACGAGAGTAAAGTACGTTTTTTGTTACGCAGATGG
AATATAAAATATGACATTGCAAGGGATTTAGCACGGTATCATAACAATGATGTATAAGAG
TATAAAACAAAATATATAAGGAATACAAAACTATGTTACGCAAGTAAGTGAAGCCTATGG
AATAGATAAGAATAGACAATACAGAGATTAGTTGAAATTACTGCGGTCTACATTATTTCA
GCAAAAAATATATCTCAAATACTGGATTGTAACAATTTTTGGCCATTTAGGTTAGTAAGC
AAGTTGAGCTTCGAATTTATTTTAGATCATGTTAGTGGTGTACAAGCATCATAATTCTTT
TCCCTTGTTCAATTATGGCAATGGTGGTCACTTATAAACAGCATCCCACACTCAAACCCT
TTTGAGGTTCTCATTTTCCAAGCTCCCGGGATTATAAAATTCAACAATCTTACTTGAGAA
CTTTTCAAAAGTAGAATGAAGGCCATCAATGTTGTTACTGGAACATGACTTGACCATGAC
AAGATCACGTTCGTCTGTCACAACTGCAGTAATCTTCAGTTCTTCTATTGCCTGAACATC
AGATATAATAATAATTCTAGTCATTTGAAGCCAGGAAAAGAGAAGTAGAGTTTAACCAAC
TTACCCTTTCTTCAGTGCATGCACCTTCTAGATCTTGTTTGTTACAGAGAATTAGCCAAG
GCTTTGATGACAATTGATTGTTTGATAACGCTTTGTGCAAAGTATCGGTCGTCACTTGCA
ACTCTCCATGGGTACATGAACCGTCAACGACAAATATCACAGCATCTACGTTCTGGTAAT
AACGATCCCAATACTGACGAACTGATTCTCCTCC

InterProScan

PANTHER
NADH_UbQ_FeS_4_mit (IPR006885) - T[54-193] 8.6E-53
Gene3D
NDUFS4-like_sf (IPR038532) - T[90-172] 4.6E-32
Pfam
NADH_UbQ_FeS_4_mit (IPR006885) - T[94-188] 9.0E-37

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NDUS4_HUMAN 55.97 % 158 1.28E-49